Displaying data sets 27401 - 27500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G19680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 16 6 72.73% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 0 0 33.33% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '38.244'
Avg. expression score in LCM sample: '13.0958'
Tissue used: 'pure endosperm, no chalazal'
AT5G19670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 0 2 2 100.00% 50.00% 5 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '74.3963'
Avg. expression score in LCM sample: '13.0958'
Tissue used: 'full endosperm'
AT5G19670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '38.1596'
Avg. embryo expression (LCM): '49.7822'
AT5G19670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19660 S1P endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.16159 x 10-1 23 1 95.83% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19660 S1P endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.34614 x 10-1 8 1 1 8 88.89% 88.89% 9 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.154126'
Avg. expression score for this sample: '73.3275'
Avg. expression score in LCM sample: '41.0072'
Tissue used: 'pure endosperm, no chalazal'
AT5G19660 S1P endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 2 1 8 50.00% 88.89% 4 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.154126'
Avg. expression score for this sample: '60.6208'
Avg. expression score in LCM sample: '41.0072'
Tissue used: 'full endosperm'
AT5G19660 S1P embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 2 1 0 71.43% 0.00% 7 1 TAIR8 Avg. embryo expression (dissected): '71.4562'
Avg. embryo expression (LCM): '58.0206'
AT5G19660 S1P endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19660 S1P endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 25 5 83.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19650 OFP8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19650 OFP8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 1 2 0.00% 66.67% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.10314'
Avg. expression score in LCM sample: '19.8863'
Tissue used: 'pure endosperm, no chalazal'
AT5G19650 OFP8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.26189'
Avg. expression score in LCM sample: '19.8863'
Tissue used: 'full endosperm'
AT5G19650 OFP8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '3.30232'
Avg. embryo expression (LCM): '7.56026'
AT5G19650 OFP8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19650 OFP8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19640 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.140424'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G19640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.297253'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G19640 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.407687'
Avg. embryo expression (LCM): '0'
AT5G19640 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19640 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '102.342'
Avg. expression score in LCM sample: '43.594'
Tissue used: 'pure endosperm, no chalazal'
AT5G19630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '100.815'
Avg. expression score in LCM sample: '43.594'
Tissue used: 'full endosperm'
AT5G19630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '104.346'
Avg. embryo expression (LCM): '118.402'
AT5G19630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19620 OEP80 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.0819 x 10-2 56 11 83.58% 67 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19620 OEP80 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 18 5 6 7 78.26% 53.85% 23 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.599694'
Avg. expression score for this sample: '73.4653'
Avg. expression score in LCM sample: '28.7344'
Tissue used: 'pure endosperm, no chalazal'
AT5G19620 OEP80 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.4514 x 10-1 39 8 21 30 82.98% 58.82% 47 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.599694'
Avg. expression score for this sample: '76.7855'
Avg. expression score in LCM sample: '28.7344'
Tissue used: 'full endosperm'
AT5G19620 OEP80 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.26434 x 10-1 22 17 2 4 56.41% 66.67% 39 6 TAIR8 Avg. embryo expression (dissected): '153.514'
Avg. embryo expression (LCM): '129.743'
AT5G19620 OEP80 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19620 OEP80 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.11163 x 10-1 35 7 83.33% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19610 GNL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.98403 x 10-1 393 108 78.44% 501 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19610 GNL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 2 0.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.312788'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G19610 GNL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.850464'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G19610 GNL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G19610 GNL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19610 GNL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 283 200 58.59% 483 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19600 SULTR3;5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 29 23 55.77% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19600 SULTR3;5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G19600 SULTR3;5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.224091'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G19600 SULTR3;5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G19600 SULTR3;5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19600 SULTR3;5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 42 13 76.36% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.827 x 10-3 9 23 28.12% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.04927 x 10-1 1 11 1 7 8.33% 87.50% 12 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.186878'
Avg. expression score for this sample: '296.959'
Avg. expression score in LCM sample: '98.2556'
Tissue used: 'pure endosperm, no chalazal'
AT5G19590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.12338 x 10-1 10 23 8 37 30.30% 82.22% 33 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.186878'
Avg. expression score for this sample: '1006.88'
Avg. expression score in LCM sample: '98.2556'
Tissue used: 'full endosperm'
AT5G19590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 5 1 1 37.50% 50.00% 8 2 TAIR8 Avg. embryo expression (dissected): '314.221'
Avg. embryo expression (LCM): '287.843'
AT5G19590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.8314 x 10-2 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.6046 x 10-2 12 3 80.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '25.7916'
Avg. expression score in LCM sample: '.690802'
Tissue used: 'pure endosperm, no chalazal'
AT5G19580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.099'
Avg. expression score in LCM sample: '.690802'
Tissue used: 'full endosperm'
AT5G19580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '14.0549'
Avg. embryo expression (LCM): '0'
AT5G19580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '126.946'
Avg. expression score in LCM sample: '81.8233'
Tissue used: 'pure endosperm, no chalazal'
AT5G19570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '141.456'
Avg. expression score in LCM sample: '81.8233'
Tissue used: 'full endosperm'
AT5G19570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '243.337'
Avg. embryo expression (LCM): '214.714'
AT5G19570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19560 ROPGEF10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19560 ROPGEF10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.1933 x 10-1 113 31 78 60 78.47% 43.48% 144 138 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.161898'
Avg. expression score for this sample: '257.006'
Avg. expression score in LCM sample: '32.791'
Tissue used: 'pure endosperm, no chalazal'
AT5G19560 ROPGEF10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.3036 x 10-2 418 96 117 147 81.32% 55.68% 514 264 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.161898'
Avg. expression score for this sample: '495.401'
Avg. expression score in LCM sample: '32.791'
Tissue used: 'full endosperm'
AT5G19560 ROPGEF10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 2 4 0 71.43% 0.00% 7 4 TAIR8 Avg. embryo expression (dissected): '12.9995'
Avg. embryo expression (LCM): '.70328'
AT5G19560 ROPGEF10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.425 x 10-3 13 19 40.62% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19560 ROPGEF10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19550 ASP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19550 ASP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '455.198'
Avg. expression score in LCM sample: '127.651'
Tissue used: 'pure endosperm, no chalazal'
AT5G19550 ASP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '305.803'
Avg. expression score in LCM sample: '127.651'
Tissue used: 'full endosperm'
AT5G19550 ASP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '239.878'
Avg. embryo expression (LCM): '105.178'
AT5G19550 ASP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19550 ASP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.495 x 10-3 56 9 86.15% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 40 10 19 19 80.00% 50.00% 50 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.764198'
Avg. expression score for this sample: '90.1981'
Avg. expression score in LCM sample: '28.5727'
Tissue used: 'pure endosperm, no chalazal'
AT5G19540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.01181 x 10-1 61 14 29 36 81.33% 55.38% 75 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.764198'
Avg. expression score for this sample: '135.891'
Avg. expression score in LCM sample: '28.5727'
Tissue used: 'full endosperm'
AT5G19540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.30801 x 10-1 17 28 2 4 37.78% 66.67% 45 6 TAIR8 Avg. embryo expression (dissected): '100.532'
Avg. embryo expression (LCM): '87.3951'
AT5G19540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.61107 x 10-1 12 11 52.17% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.463 x 10-3 35 4 89.74% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19530 ACL5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.5 x 10-8 98 1 98.99% 99 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19530 ACL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 1 1 75.00% 50.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.507678'
Avg. expression score for this sample: '3.43352'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G19530 ACL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.28308 x 10-1 5 1 6 1 83.33% 14.29% 6 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.507678'
Avg. expression score for this sample: '3.34391'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G19530 ACL5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 15 10 9 6 60.00% 40.00% 25 15 TAIR8 Avg. embryo expression (dissected): '38.9817'
Avg. embryo expression (LCM): '37.2362'
AT5G19530 ACL5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19530 ACL5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.49475 x 10-1 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19520 MSL9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.24257 x 10-1 6 4 60.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19520 MSL9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.00623 x 10-1 18 10 8 6 64.29% 42.86% 28 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001308'
Avg. expression score for this sample: '19.6253'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G19520 MSL9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.21 x 10-3 19 30 28 26 38.78% 48.15% 49 54 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001308'
Avg. expression score for this sample: '32.9566'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G19520 MSL9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.0055 x 10-2 107 170 26 32 38.63% 55.17% 277 58 TAIR8 Avg. embryo expression (dissected): '222.931'
Avg. embryo expression (LCM): '144.298'
AT5G19520 MSL9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.5194 x 10-2 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19520 MSL9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.12657 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.8 x 10-14 364 63 85.25% 427 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.65736 x 10-1 40 19 21 26 67.80% 55.32% 59 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.670061'
Avg. expression score for this sample: '3077.12'
Avg. expression score in LCM sample: '1551.12'
Tissue used: 'pure endosperm, no chalazal'