Displaying data sets 27301 - 27400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G19830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.26316 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 2 50.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.681659'
Avg. expression score for this sample: '3.59021'
Avg. expression score in LCM sample: '4.36528'
Tissue used: 'pure endosperm, no chalazal'
AT5G19830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.35117 x 10-1 5 0 2 4 100.00% 66.67% 5 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.681659'
Avg. expression score for this sample: '7.21664'
Avg. expression score in LCM sample: '4.36528'
Tissue used: 'full endosperm'
AT5G19830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '9.44361'
Avg. embryo expression (LCM): '6.22905'
AT5G19830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 14 3 82.35% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19820 emb2734 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.94 x 10-3 159 39 80.30% 198 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19820 emb2734 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 16 12 7 23 57.14% 76.67% 28 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '103.95'
Avg. expression score in LCM sample: '118.245'
Tissue used: 'pure endosperm, no chalazal'
AT5G19820 emb2734 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 15 13 14 37 53.57% 72.55% 28 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '118.758'
Avg. expression score in LCM sample: '118.245'
Tissue used: 'full endosperm'
AT5G19820 emb2734 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.47246 x 10-1 34 28 8 7 54.84% 46.67% 62 15 TAIR8 Avg. embryo expression (dissected): '186.388'
Avg. embryo expression (LCM): '315.007'
AT5G19820 emb2734 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.6923 x 10-1 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19820 emb2734 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.13291 x 10-1 100 56 64.10% 156 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.75512'
Avg. expression score in LCM sample: '3.92434'
Tissue used: 'pure endosperm, no chalazal'
AT5G19810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.2078'
Avg. expression score in LCM sample: '3.92434'
Tissue used: 'full endosperm'
AT5G19810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.16284'
Avg. embryo expression (LCM): '0'
AT5G19810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G19800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.2002'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G19800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G19800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19790 RAP2.11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.6939 x 10-2 19 4 82.61% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19790 RAP2.11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 3 3 3 66.67% 50.00% 9 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.405786'
Avg. expression score for this sample: '3.32341'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G19790 RAP2.11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.5924 x 10-1 33 21 5 3 61.11% 37.50% 54 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.405786'
Avg. expression score for this sample: '13.5462'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G19790 RAP2.11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.7337 x 10-2 35 8 8 2 81.40% 20.00% 43 10 TAIR8 Avg. embryo expression (dissected): '24.5372'
Avg. embryo expression (LCM): '0'
AT5G19790 RAP2.11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19790 RAP2.11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.308 x 10-3 20 1 95.24% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19780 TUA5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2204 270 89.09% 2474 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19780 TUA5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.7095 x 10-1 1373 523 528 780 72.42% 59.63% 1896 1308 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.069578'
Avg. expression score for this sample: '1023.96'
Avg. expression score in LCM sample: '922.118'
Tissue used: 'pure endosperm, no chalazal'
AT5G19780 TUA5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.657 x 10-3 1299 292 1103 1134 81.65% 50.69% 1591 2237 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.069578'
Avg. expression score for this sample: '888.49'
Avg. expression score in LCM sample: '922.118'
Tissue used: 'full endosperm'
AT5G19780 TUA5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.2 x 10-6 2210 1728 416 409 56.12% 49.58% 3938 825 TAIR8 Avg. embryo expression (dissected): '2174.95'
Avg. embryo expression (LCM): '1485.84'
AT5G19780 TUA5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.5 x 10-5 248 200 55.36% 448 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19780 TUA5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.1 x 10-7 913 648 58.49% 1561 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19770 TUA3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19770 TUA3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '473.992'
Avg. expression score in LCM sample: '521.82'
Tissue used: 'pure endosperm, no chalazal'
AT5G19770 TUA3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '500.687'
Avg. expression score in LCM sample: '521.82'
Tissue used: 'full endosperm'
AT5G19770 TUA3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '694.921'
Avg. embryo expression (LCM): '644.343'
AT5G19770 TUA3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19770 TUA3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.3216 x 10-2 167 39 81.07% 206 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.69133 x 10-1 34 36 14 46 48.57% 76.67% 70 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.040879'
Avg. expression score for this sample: '210.887'
Avg. expression score in LCM sample: '158.899'
Tissue used: 'pure endosperm, no chalazal'
AT5G19760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.352 x 10-3 67 31 21 137 68.37% 86.71% 98 158 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.040879'
Avg. expression score for this sample: '182.616'
Avg. expression score in LCM sample: '158.899'
Tissue used: 'full endosperm'
AT5G19760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.3934 x 10-2 35 72 16 12 32.71% 42.86% 107 28 TAIR8 Avg. embryo expression (dissected): '327.44'
Avg. embryo expression (LCM): '487.449'
AT5G19760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.57875 x 10-1 34 7 82.93% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.32295 x 10-1 102 33 75.56% 135 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.29101 x 10-1 13 9 59.09% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.55759 x 10-1 17 18 6 26 48.57% 81.25% 35 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '43.7927'
Avg. expression score in LCM sample: '10.0387'
Tissue used: 'pure endosperm, no chalazal'
AT5G19750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 14 11 4 17 56.00% 80.95% 25 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '47.494'
Avg. expression score in LCM sample: '10.0387'
Tissue used: 'full endosperm'
AT5G19750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.0032 x 10-2 67 117 36 33 36.41% 47.83% 184 69 TAIR8 Avg. embryo expression (dissected): '217.674'
Avg. embryo expression (LCM): '257.175'
AT5G19750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.64192 x 10-1 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5315 x 10-1 15 5 75.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.954 x 10-3 22 2 91.67% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.22213 x 10-1 154 70 80 110 68.75% 57.89% 224 190 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.166486'
Avg. expression score for this sample: '305.538'
Avg. expression score in LCM sample: '247.998'
Tissue used: 'pure endosperm, no chalazal'
AT5G19740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.80293 x 10-1 122 58 99 144 67.78% 59.26% 180 243 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.166486'
Avg. expression score for this sample: '166.79'
Avg. expression score in LCM sample: '247.998'
Tissue used: 'full endosperm'
AT5G19740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 73 79 26 30 48.03% 53.57% 152 56 TAIR8 Avg. embryo expression (dissected): '258.617'
Avg. embryo expression (LCM): '95.5833'
AT5G19740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.17705 x 10-1 13 4 76.47% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.21663 x 10-1 13 5 72.22% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.89692 x 10-1 3 5 37.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.985 x 10-3 39 17 68 47 69.64% 40.87% 56 115 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000166'
Avg. expression score for this sample: '137.019'
Avg. expression score in LCM sample: '79.501'
Tissue used: 'pure endosperm, no chalazal'
AT5G19730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.5212 x 10-2 51 22 55 39 69.86% 41.49% 73 94 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000166'
Avg. expression score for this sample: '82.0592'
Avg. expression score in LCM sample: '79.501'
Tissue used: 'full endosperm'
AT5G19730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.20834 x 10-1 95 98 68 40 49.22% 37.04% 193 108 TAIR8 Avg. embryo expression (dissected): '419.625'
Avg. embryo expression (LCM): '159.456'
AT5G19730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.39461 x 10-1 12 20 37.50% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.24882 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19729 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19729 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.26916'
Avg. expression score in LCM sample: '13.0077'
Tissue used: 'pure endosperm, no chalazal'
AT5G19729 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '13.0077'
Tissue used: 'full endosperm'
AT5G19729 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G19729 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19729 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.0115'
Avg. expression score in LCM sample: '2.89549'
Tissue used: 'pure endosperm, no chalazal'
AT5G19720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '2.89549'
Tissue used: 'full endosperm'
AT5G19720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G19720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G19710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.51525'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G19710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G19710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.45192 x 10-1 41 22 65.08% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.29782'
Avg. expression score in LCM sample: '130.032'
Tissue used: 'pure endosperm, no chalazal'
AT5G19700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.9661'
Avg. expression score in LCM sample: '130.032'
Tissue used: 'full endosperm'
AT5G19700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.84401'
Avg. embryo expression (LCM): '0'
AT5G19700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.60908 x 10-1 153 61 71.50% 214 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19690 STT3A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9 x 10-14 262 20 92.91% 282 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19690 STT3A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.56985 x 10-1 27 8 10 21 77.14% 67.74% 35 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.136758'
Avg. expression score for this sample: '121.6'
Avg. expression score in LCM sample: '108.838'
Tissue used: 'pure endosperm, no chalazal'
AT5G19690 STT3A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.92473 x 10-1 77 61 68 239 55.80% 77.85% 138 307 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.136758'
Avg. expression score for this sample: '161.451'
Avg. expression score in LCM sample: '108.838'
Tissue used: 'full endosperm'
AT5G19690 STT3A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 31 32 4 6 49.21% 60.00% 63 10 TAIR8 Avg. embryo expression (dissected): '154.338'
Avg. embryo expression (LCM): '157.987'
AT5G19690 STT3A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.27882 x 10-1 32 11 74.42% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19690 STT3A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.12 x 10-4 295 64 82.17% 359 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.8518 x 10-2 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.4472 x 10-1 4 1 1 7 80.00% 87.50% 5 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '72.1815'
Avg. expression score in LCM sample: '40.6544'
Tissue used: 'pure endosperm, no chalazal'
AT5G19680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.88168 x 10-1 3 2 4 4 60.00% 50.00% 5 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '95.5109'
Avg. expression score in LCM sample: '40.6544'
Tissue used: 'full endosperm'
AT5G19680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 3 0 1 0.00% 100.00% 3 1 TAIR8 Avg. embryo expression (dissected): '95.4026'
Avg. embryo expression (LCM): '75.7031'