GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G060870	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.69 x 10^-5	433	258	383	277	62.66%	41.97%	691	660	RefGen V2	χ2 p-value for B73 x Mo17: '2.79e-11' χ2 p-value for Mo17 x B73: '.0000369' Biased in favor of strain: 'B73'
GRMZM2G060870	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.881699 x 10^-1	303	141	190	371	68.24%	66.13%	444	561	RefGen V2	χ2 p-value for B73 x Mo17: '.481049' χ2 p-value for Mo17 x B73: '.7881699' Biased in favor of strain: ''
GRMZM2G060866	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G060866	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G060857	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	3	2	0	40.00%	0.00%	5	2	RefGen V2	χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G060857	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G060856	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.8462 x 10^-2	392	113	175	279	77.62%	61.45%	505	454	RefGen V2	χ2 p-value for B73 x Mo17: '1.76e-07' χ2 p-value for Mo17 x B73: '.018462' Biased in favor of strain: ''
GRMZM2G060856	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.20059 x 10^-2	220	185	220	183	54.32%	45.41%	405	403	RefGen V2	χ2 p-value for B73 x Mo17: '.0820059' χ2 p-value for Mo17 x B73: '.0653142' Biased in favor of strain: ''
GRMZM2G060842	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.691714 x 10^-1	57	67	51	71	45.97%	58.20%	124	122	RefGen V2	χ2 p-value for B73 x Mo17: '.3691714' χ2 p-value for Mo17 x B73: '.070185' Biased in favor of strain: ''
GRMZM2G060842	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999995 x 10^-1	56	43	34	68	56.57%	66.67%	99	102	RefGen V2	χ2 p-value for B73 x Mo17: '.0330018' χ2 p-value for Mo17 x B73: '.9999995' Biased in favor of strain: ''
GRMZM2G060824	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2412	668	1463	1804	78.31%	55.22%	3080	3267	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G060824	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.57 x 10^-10	1874	1176	1527	1197	61.44%	43.94%	3050	2724	RefGen V2	χ2 p-value for B73 x Mo17: '1.29e-36' χ2 p-value for Mo17 x B73: '2.57e-10' Biased in favor of strain: 'B73'
GRMZM2G060817	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.76336 x 10^-2	535	394	470	400	57.59%	45.98%	929	870	RefGen V2	χ2 p-value for B73 x Mo17: '3.73e-06' χ2 p-value for Mo17 x B73: '.0176336' Biased in favor of strain: 'B73'
GRMZM2G060817	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.91634 x 10^-2	441	182	265	435	70.79%	62.14%	623	700	RefGen V2	χ2 p-value for B73 x Mo17: '.0291634' χ2 p-value for Mo17 x B73: '.0111175' Biased in favor of strain: ''
GRMZM2G060811	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	2	0	100.00%	0.00%	4	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G060811	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.0 x 10^-30	312	57	364	114	84.55%	23.85%	369	478	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.80e-30' Biased in favor of strain: 'B73'
GRMZM2G060798	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.09 x 10^-9	463	207	314	182	69.10%	36.69%	670	496	RefGen V2	χ2 p-value for B73 x Mo17: '4.59e-23' χ2 p-value for Mo17 x B73: '3.09e-09' Biased in favor of strain: 'B73'
GRMZM2G060798	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.478122 x 10^-1	324	97	139	261	76.96%	65.25%	421	400	RefGen V2	χ2 p-value for B73 x Mo17: '7.46e-06' χ2 p-value for Mo17 x B73: '.5478122' Biased in favor of strain: ''
GRMZM2G060765	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.117686 x 10^-1	136	49	61	94	73.51%	60.65%	185	155	RefGen V2	χ2 p-value for B73 x Mo17: '.0482151' χ2 p-value for Mo17 x B73: '.1117686' Biased in favor of strain: ''
GRMZM2G060765	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.16 x 10^-5	212	114	203	131	65.03%	39.22%	326	334	RefGen V2	χ2 p-value for B73 x Mo17: '5.71e-08' χ2 p-value for Mo17 x B73: '.0000816' Biased in favor of strain: 'B73'
GRMZM2G060762	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.600821 x 10^-1	118	85	124	110	58.13%	47.01%	203	234	RefGen V2	χ2 p-value for B73 x Mo17: '.0205503' χ2 p-value for Mo17 x B73: '.3600821' Biased in favor of strain: ''
GRMZM2G060762	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.757054 x 10^-1	67	76	49	91	46.85%	65.00%	143	140	RefGen V2	χ2 p-value for B73 x Mo17: '5.00e-07' χ2 p-value for Mo17 x B73: '.6757054' Biased in favor of strain: ''
GRMZM2G060760	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	10	2	4	16.67%	66.67%	12	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0002385' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM2G060760	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.498174 x 10^-1	19	6	22	15	76.00%	40.54%	25	37	RefGen V2	χ2 p-value for B73 x Mo17: '.0093224' χ2 p-value for Mo17 x B73: '.2498174' Biased in favor of strain: ''
GRMZM2G060749	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	0		0.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G060749	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		10	0	3	1	100.00%	25.00%	10	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.0770998' Biased in favor of strain: ''
GRMZM2G060742	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.32594 x 10^-2	12	12	2	18	50.00%	90.00%	24	20	RefGen V2	χ2 p-value for B73 x Mo17: '.0832594' χ2 p-value for Mo17 x B73: '.0268567' Biased in favor of strain: ''
GRMZM2G060742	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.637029 x 10^-1	7	5	6	11	58.33%	64.71%	12	17	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.2252529' Biased in favor of strain: ''
GRMZM2G060732	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	0	1	50.00%	100.00%	4	1	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G060732	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G060726	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.653 x 10^-4	53	1	38	34	98.15%	47.22%	54	72	RefGen V2	χ2 p-value for B73 x Mo17: '9.23e-07' χ2 p-value for Mo17 x B73: '.0004653' Biased in favor of strain: 'B73'
GRMZM2G060726	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.719716 x 10^-1	233	129	180	155	64.36%	46.27%	362	335	RefGen V2	χ2 p-value for B73 x Mo17: '4.60e-08' χ2 p-value for Mo17 x B73: '.1719716' Biased in favor of strain: ''
GRMZM2G060720	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.229856 x 10^-1	53	54	41	28	49.53%	40.58%	107	69	RefGen V2	χ2 p-value for B73 x Mo17: '.9229856' χ2 p-value for Mo17 x B73: '.1175791' Biased in favor of strain: ''
GRMZM2G060720	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.6986 x 10^-3	59	10	23	21	85.51%	47.73%	69	44	RefGen V2	χ2 p-value for B73 x Mo17: '.0009006' χ2 p-value for Mo17 x B73: '.0076986' Biased in favor of strain: 'B73'
GRMZM2G060712	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	0	0	100.00%		4	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G060712	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	0	0	0	100.00%		6	0	RefGen V2	χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G060702	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.48 x 10^-13	186	54	140	43	77.50%	23.50%	240	183	RefGen V2	χ2 p-value for B73 x Mo17: '1.59e-17' χ2 p-value for Mo17 x B73: '7.48e-13' Biased in favor of strain: 'B73'
GRMZM2G060702	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.34 x 10^-14	236	30	146	87	88.72%	37.34%	266	233	RefGen V2	χ2 p-value for B73 x Mo17: '2.34e-14' χ2 p-value for Mo17 x B73: '2.17e-21' Biased in favor of strain: 'B73'
GRMZM2G060669	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1482	191	661	366	88.58%	35.64%	1673	1027	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G060669	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1140	343	954	345	76.87%	26.56%	1483	1299	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G060659	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	9	4	2	40.00%	33.33%	15	6	RefGen V2	χ2 p-value for B73 x Mo17: '.438578' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: ''
GRMZM2G060659	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.9 x 10^-8	9	29	31	6	23.68%	16.22%	38	37	RefGen V2	χ2 p-value for B73 x Mo17: '1.90e-08' χ2 p-value for Mo17 x B73: '7.52e-11' Biased in favor of strain: ''
GRMZM2G060630	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.1 x 10^-5	1	10	0	58	9.09%	100.00%	11	58	RefGen V2	χ2 p-value for B73 x Mo17: '.000051' χ2 p-value for Mo17 x B73: '7.24e-08' Biased in favor of strain: 'Mo17'
GRMZM2G060630	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.67 x 10^-5	2	23	2	44	8.00%	95.65%	25	46	RefGen V2	χ2 p-value for B73 x Mo17: '.0000267' χ2 p-value for Mo17 x B73: '5.92e-10' Biased in favor of strain: 'Mo17'
GRMZM2G060611	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.71 x 10^-13	3052	2162	2464	1977	58.53%	44.52%	5214	4441	RefGen V2	χ2 p-value for B73 x Mo17: '6.60e-35' χ2 p-value for Mo17 x B73: '2.71e-13' Biased in favor of strain: 'B73'
GRMZM2G060611	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.16 x 10^-7	5369	2376	3398	5478	69.32%	61.72%	7745	8876	RefGen V2	χ2 p-value for B73 x Mo17: '7.16e-07' χ2 p-value for Mo17 x B73: '4.50e-23' Biased in favor of strain: 'B73'
GRMZM2G060583	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.6079 x 10^-3	61	77	69	83	44.20%	54.61%	138	152	RefGen V2	χ2 p-value for B73 x Mo17: '2.17e-08' χ2 p-value for Mo17 x B73: '.0016079' Biased in favor of strain: ''
GRMZM2G060583	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.176172 x 10^-1	158	167	139	128	48.62%	47.94%	325	267	RefGen V2	χ2 p-value for B73 x Mo17: '.6176172' χ2 p-value for Mo17 x B73: '.500827' Biased in favor of strain: ''
GRMZM2G060579	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.687563 x 10^-1	291	295	260	278	49.66%	51.67%	586	538	RefGen V2	χ2 p-value for B73 x Mo17: '.8687563' χ2 p-value for Mo17 x B73: '.4377283' Biased in favor of strain: ''
GRMZM2G060579	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.580596 x 10^-1	181	104	123	167	63.51%	57.59%	285	290	RefGen V2	χ2 p-value for B73 x Mo17: '.2580596' χ2 p-value for Mo17 x B73: '.001037' Biased in favor of strain: ''
GRMZM2G060567	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	9011	2936	4744	6214	75.42%	56.71%	11947	10958	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G060567	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.923 x 10^-4	3136	2116	2209	1968	59.71%	47.12%	5252	4177	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.0001923' Biased in favor of strain: 'B73'
GRMZM2G060564	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.04 x 10^-5	534	289	452	335	64.88%	42.57%	823	787	RefGen V2	χ2 p-value for B73 x Mo17: '1.34e-17' χ2 p-value for Mo17 x B73: '.0000304' Biased in favor of strain: 'B73'
GRMZM2G060564	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	775	87	392	176	89.91%	30.99%	862	568	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G060561	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0211 x 10^-3	320	87	137	190	78.62%	58.10%	407	327	RefGen V2	χ2 p-value for B73 x Mo17: '3.10e-07' χ2 p-value for Mo17 x B73: '.0010211' Biased in favor of strain: 'B73'
GRMZM2G060561	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.39 x 10^-12	519	321	428	201	61.79%	31.96%	840	629	RefGen V2	χ2 p-value for B73 x Mo17: '8.39e-12' χ2 p-value for Mo17 x B73: '1.42e-19' Biased in favor of strain: 'B73'
GRMZM2G060554	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.02604 x 10^-1	303	250	299	302	54.79%	50.25%	553	601	RefGen V2	χ2 p-value for B73 x Mo17: '.0242094' χ2 p-value for Mo17 x B73: '.902604' Biased in favor of strain: ''
GRMZM2G060554	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.916291 x 10^-1	121	58	116	197	67.60%	62.94%	179	313	RefGen V2	χ2 p-value for B73 x Mo17: '.7916291' χ2 p-value for Mo17 x B73: '.1618483' Biased in favor of strain: ''
GRMZM2G060544	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3341	947	1703	1816	77.92%	51.61%	4288	3519	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G060544	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.26 x 10^-10	2763	1314	652	447	67.77%	40.67%	4077	1099	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '6.26e-10' Biased in favor of strain: 'B73'
GRMZM2G060507	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	1	1	66.67%	50.00%	3	2	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G060507	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		25	0	1	3	100.00%	75.00%	25	4	RefGen V2	χ2 p-value for B73 x Mo17: '.000407' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: ''
GRMZM2G060505	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.294403 x 10^-1	113	61	75	109	64.94%	59.24%	174	184	RefGen V2	χ2 p-value for B73 x Mo17: '.6294403' χ2 p-value for Mo17 x B73: '.0325758' Biased in favor of strain: ''
GRMZM2G060505	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.086145 x 10^-1	155	87	92	87	64.05%	48.60%	242	179	RefGen V2	χ2 p-value for B73 x Mo17: '.0000124' χ2 p-value for Mo17 x B73: '.7086145' Biased in favor of strain: ''
GRMZM2G060485	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.25828 x 10^-2	25	12	29	14	67.57%	32.56%	37	43	RefGen V2	χ2 p-value for B73 x Mo17: '.0325828' χ2 p-value for Mo17 x B73: '.0221679' Biased in favor of strain: 'B73'
GRMZM2G060485	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.56152 x 10^-1	15	4	13	9	78.95%	40.91%	19	22	RefGen V2	χ2 p-value for B73 x Mo17: '.256152' χ2 p-value for Mo17 x B73: '.0103818' Biased in favor of strain: ''
GRMZM2G060470	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.924769 x 10^-1	37	15	11	14	71.15%	56.00%	52	25	RefGen V2	χ2 p-value for B73 x Mo17: '.4924769' χ2 p-value for Mo17 x B73: '.2578989' Biased in favor of strain: ''
GRMZM2G060470	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.796682 x 10^-1	59	56	36	45	51.30%	55.56%	115	81	RefGen V2	χ2 p-value for B73 x Mo17: '.7796682' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G060467	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.9 x 10^-12	551	345	492	294	61.50%	37.40%	896	786	RefGen V2	χ2 p-value for B73 x Mo17: '5.90e-12' χ2 p-value for Mo17 x B73: '1.64e-12' Biased in favor of strain: 'B73'
GRMZM2G060467	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.3123 x 10^-3	325	123	213	116	72.54%	35.26%	448	329	RefGen V2	χ2 p-value for B73 x Mo17: '.0083123' χ2 p-value for Mo17 x B73: '1.27e-33' Biased in favor of strain: 'B73'
GRMZM2G060465	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	2	100.00%	100.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G060465	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	3	2	12	50.00%	85.71%	6	14	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0075263' Biased in favor of strain: ''
GRMZM2G060451	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.748444 x 10^-1	97	79	62	95	55.11%	60.51%	176	157	RefGen V2	χ2 p-value for B73 x Mo17: '.1748444' χ2 p-value for Mo17 x B73: '.0084463' Biased in favor of strain: ''
GRMZM2G060451	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.038572 x 10^-1	236	82	108	250	74.21%	69.83%	318	358	RefGen V2	χ2 p-value for B73 x Mo17: '.0043049' χ2 p-value for Mo17 x B73: '.2038572' Biased in favor of strain: ''
GRMZM2G060410	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	7	0	8	0.00%	100.00%	7	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G060410	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.6608 x 10^-3	18	5	26	10	78.26%	27.78%	23	36	RefGen V2	χ2 p-value for B73 x Mo17: '.0067144' χ2 p-value for Mo17 x B73: '.0076608' Biased in favor of strain: 'B73'
GRMZM2G060369	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.77 x 10^-18	79	1	81	1	98.75%	1.22%	80	82	RefGen V2	χ2 p-value for B73 x Mo17: '2.77e-18' χ2 p-value for Mo17 x B73: '1.01e-18' Biased in favor of strain: 'B73'
GRMZM2G060369	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	5	0	100.00%	0.00%	1	5	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: ''
GRMZM2G060357	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.662492 x 10^-1	30	13	27	33	69.77%	55.00%	43	60	RefGen V2	χ2 p-value for B73 x Mo17: '.6662492' χ2 p-value for Mo17 x B73: '.0552342' Biased in favor of strain: ''
GRMZM2G060357	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.862137 x 10^-1	39	18	29	25	68.42%	46.30%	57	54	RefGen V2	χ2 p-value for B73 x Mo17: '.0054105' χ2 p-value for Mo17 x B73: '.5862137' Biased in favor of strain: ''
GRMZM2G060355	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.145968 x 10^-1	73	41	82	63	64.04%	43.45%	114	145	RefGen V2	χ2 p-value for B73 x Mo17: '.0027258' χ2 p-value for Mo17 x B73: '.1145968' Biased in favor of strain: ''
GRMZM2G060355	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999502 x 10^-1	78	39	34	97	66.67%	74.05%	117	131	RefGen V2	χ2 p-value for B73 x Mo17: '.9999502' χ2 p-value for Mo17 x B73: '.073193' Biased in favor of strain: ''
GRMZM2G060349	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	4.03 x 10^-7	173	151	98	58	53.40%	37.18%	324	156	RefGen V2	χ2 p-value for B73 x Mo17: '4.03e-07' χ2 p-value for Mo17 x B73: '5.60e-15' Biased in favor of strain: ''
GRMZM2G060349	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.291528 x 10^-1	254	252	260	208	50.20%	44.44%	506	468	RefGen V2	χ2 p-value for B73 x Mo17: '.9291528' χ2 p-value for Mo17 x B73: '.01623' Biased in favor of strain: ''
GRMZM2G060337	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.560565 x 10^-1	28	22	20	25	56.00%	55.56%	50	45	RefGen V2	χ2 p-value for B73 x Mo17: '.3961439' χ2 p-value for Mo17 x B73: '.4560565' Biased in favor of strain: ''
GRMZM2G060337	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.32676 x 10^-2	20	4	12	9	83.33%	42.86%	24	21	RefGen V2	χ2 p-value for B73 x Mo17: '.0832676' χ2 p-value for Mo17 x B73: '.0206375' Biased in favor of strain: ''
GRMZM2G060327	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.827649 x 10^-1	15	8	12	15	65.22%	55.56%	23	27	RefGen V2	χ2 p-value for B73 x Mo17: '.8827649' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: ''
GRMZM2G060327	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.41499 x 10^-2	20	33	23	37	37.74%	61.67%	53	60	RefGen V2	χ2 p-value for B73 x Mo17: '.0741499' χ2 p-value for Mo17 x B73: '.0707011' Biased in favor of strain: ''
GRMZM2G060324	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	4	2	3	60.00%	60.00%	10	5	RefGen V2	χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''
GRMZM2G060324	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.445194 x 10^-1	8	2	4	9	80.00%	69.23%	10	13	RefGen V2	χ2 p-value for B73 x Mo17: '.3710998' χ2 p-value for Mo17 x B73: '.8445194' Biased in favor of strain: ''
GRMZM2G060311	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G060311	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	1	0	100.00%	0.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G060296	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.33 x 10^-12	1724	1027	1626	1259	62.67%	43.64%	2751	2885	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '8.33e-12' Biased in favor of strain: 'B73'
GRMZM2G060296	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.22 x 10^-17	3294	1245	1936	2730	72.57%	58.51%	4539	4666	RefGen V2	χ2 p-value for B73 x Mo17: '3.22e-17' χ2 p-value for Mo17 x B73: '3.02e-32' Biased in favor of strain: 'B73'
GRMZM2G060284	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.53189 x 10^-2	612	249	271	471	71.08%	63.48%	861	742	RefGen V2	χ2 p-value for B73 x Mo17: '.0060133' χ2 p-value for Mo17 x B73: '.0653189' Biased in favor of strain: ''
GRMZM2G060284	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.783629 x 10^-1	292	224	240	231	56.59%	49.04%	516	471	RefGen V2	χ2 p-value for B73 x Mo17: '.0027577' χ2 p-value for Mo17 x B73: '.6783629' Biased in favor of strain: ''
GRMZM2G060276	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.226781 x 10^-1	29	16	25	31	64.44%	55.36%	45	56	RefGen V2	χ2 p-value for B73 x Mo17: '.0526323' χ2 p-value for Mo17 x B73: '.4226781' Biased in favor of strain: ''
GRMZM2G060276	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173104 x 10^-1	24	1	8	10	96.00%	55.56%	25	18	RefGen V2	χ2 p-value for B73 x Mo17: '.0018629' χ2 p-value for Mo17 x B73: '.3173104' Biased in favor of strain: ''
GRMZM2G060265	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G060265	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	3	2	0.00%	40.00%	2	5	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''

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