| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G20140 | HBP5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.3522 x 10-2 | 33 | 2 | 94.29% | 35 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G20140 | HBP5 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.32061 x 10-1 | 19 | 2 | 90.48% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G20130 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.77213 x 10-1 | 11 | 11 | 3 | 3 | 50.00% | 50.00% | 22 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.44055' Avg. expression score for this sample: '173.749' Avg. expression score in LCM sample: '31.1302' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G20130 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.5656 x 10-2 | 33 | 7 | 6 | 26 | 82.50% | 81.25% | 40 | 32 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.44055' Avg. expression score for this sample: '194.567' Avg. expression score in LCM sample: '31.1302' Tissue used: 'full endosperm' |
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| AT5G20130 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.60334 x 10-1 | 36 | 39 | 7 | 4 | 48.00% | 36.36% | 75 | 11 | TAIR8 |
Avg. embryo expression (dissected): '698.549' Avg. embryo expression (LCM): '455.06' |
||||
| AT5G20130 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.9086 x 10-2 | 2 | 4 | 33.33% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20130 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 25 | 9 | 73.53% | 34 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20130 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.4716 x 10-2 | 22 | 1 | 95.65% | 23 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20120 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 10 | 2 | 7 | 11 | 83.33% | 61.11% | 12 | 18 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.086015' Avg. expression score for this sample: '222.392' Avg. expression score in LCM sample: '188.971' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G20120 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.1199 x 10-2 | 51 | 14 | 10 | 37 | 78.46% | 78.72% | 65 | 47 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.086015' Avg. expression score for this sample: '319.724' Avg. expression score in LCM sample: '188.971' Tissue used: 'full endosperm' |
|||||
| AT5G20120 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.22393 x 10-1 | 5 | 5 | 4 | 1 | 50.00% | 20.00% | 10 | 5 | TAIR8 |
Avg. embryo expression (dissected): '234.563' Avg. embryo expression (LCM): '117.146' |
||||
| AT5G20120 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.23924 x 10-1 | 13 | 2 | 86.67% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20120 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.65759 x 10-1 | 43 | 10 | 81.13% | 53 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20120 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.29 x 10-4 | 73 | 4 | 94.81% | 77 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.671404' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G20110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '11.1796' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT5G20110 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '8.70093' Avg. embryo expression (LCM): '17.8081' |
||||||
| AT5G20110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G20110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G20110 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G20100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.778789' Avg. expression score in LCM sample: '2.18999' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G20100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '2.18999' Tissue used: 'full endosperm' |
|||||||
| AT5G20100 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.11276' Avg. embryo expression (LCM): '0' |
||||||
| AT5G20100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G20100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.6667 x 10-2 | 7 | 1 | 87.50% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20100 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G20090 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.76471 x 10-1 | 8 | 0 | 1 | 0 | 100.00% | 0.00% | 8 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.777515' Avg. expression score for this sample: '197.81' Avg. expression score in LCM sample: '47.68' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G20090 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.58133 x 10-1 | 62 | 0 | 39 | 0 | 100.00% | 0.00% | 62 | 39 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.777515' Avg. expression score for this sample: '309.045' Avg. expression score in LCM sample: '47.68' Tissue used: 'full endosperm' |
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| AT5G20090 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.72548 x 10-1 | 11 | 0 | 5 | 0 | 100.00% | 0.00% | 11 | 5 | TAIR8 |
Avg. embryo expression (dissected): '300.667' Avg. embryo expression (LCM): '152.336' |
||||
| AT5G20090 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.38514 x 10-1 | 0 | 2 | 0.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20090 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.5 x 10-16 | 0 | 46 | 0.00% | 46 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20090 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.4 x 10-21 | 198 | 0 | 100.00% | 198 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.55622 x 10-1 | 58 | 13 | 18 | 18 | 81.69% | 50.00% | 71 | 36 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.004044' Avg. expression score for this sample: '64.6932' Avg. expression score in LCM sample: '23.8106' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G20080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.021 x 10-3 | 66 | 11 | 18 | 72 | 85.71% | 80.00% | 77 | 90 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.004044' Avg. expression score for this sample: '84.9388' Avg. expression score in LCM sample: '23.8106' Tissue used: 'full endosperm' |
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| AT5G20080 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.33805 x 10-1 | 82 | 54 | 23 | 15 | 60.29% | 39.47% | 136 | 38 | TAIR8 |
Avg. embryo expression (dissected): '118.625' Avg. embryo expression (LCM): '98.1704' |
||||
| AT5G20080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 16 | 4 | 80.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.03 x 10-4 | 202 | 117 | 63.32% | 319 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20080 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.51 x 10-4 | 187 | 21 | 89.90% | 208 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20070 | NUDX19 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.49171 x 10-1 | 100 | 35 | 50 | 62 | 74.07% | 55.36% | 135 | 112 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.075565' Avg. expression score for this sample: '517.022' Avg. expression score in LCM sample: '212.179' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G20070 | NUDX19 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.2265 x 10-2 | 180 | 62 | 44 | 134 | 74.38% | 75.28% | 242 | 178 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.075565' Avg. expression score for this sample: '516.451' Avg. expression score in LCM sample: '212.179' Tissue used: 'full endosperm' |
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| AT5G20070 | NUDX19 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 73 | 67 | 23 | 15 | 52.14% | 39.47% | 140 | 38 | TAIR8 |
Avg. embryo expression (dissected): '645.869' Avg. embryo expression (LCM): '559.535' |
|||
| AT5G20070 | NUDX19 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.27355 x 10-1 | 72 | 22 | 76.60% | 94 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G20070 | NUDX19 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.664 x 10-3 | 182 | 42 | 81.25% | 224 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G20070 | NUDX19 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.0 x 10-8 | 189 | 24 | 88.73% | 213 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G20060 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '282.624' Avg. expression score in LCM sample: '163.779' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G20060 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '178.22' Avg. expression score in LCM sample: '163.779' Tissue used: 'full endosperm' |
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| AT5G20060 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '489.623' Avg. embryo expression (LCM): '408.882' |
||||||
| AT5G20060 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G20060 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G20060 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G20050 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 0 | 1 | 0 | 100.00% | 0.00% | 3 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.18855' Avg. expression score for this sample: '7.31985' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G20050 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.41712 x 10-1 | 56 | 1 | 26 | 27 | 98.25% | 50.94% | 57 | 53 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.18855' Avg. expression score for this sample: '57.9231' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT5G20050 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '3.41092' Avg. embryo expression (LCM): '.816307' |
|||||
| AT5G20050 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G20050 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.74 x 10-4 | 2 | 9 | 18.18% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20050 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.1 x 10-8 | 83 | 0 | 100.00% | 83 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20045 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G20045 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '22.7462' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT5G20045 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT5G20045 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G20045 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G20045 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G20040 | IPT9 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.29569 x 10-1 | 13 | 7 | 7 | 3 | 65.00% | 30.00% | 20 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.143959' Avg. expression score for this sample: '20.1966' Avg. expression score in LCM sample: '12.8754' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G20040 | IPT9 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.11392 x 10-1 | 9 | 9 | 7 | 7 | 50.00% | 50.00% | 18 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.143959' Avg. expression score for this sample: '20.7831' Avg. expression score in LCM sample: '12.8754' Tissue used: 'full endosperm' |
||||
| AT5G20040 | IPT9 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.73246 x 10-1 | 21 | 15 | 5 | 4 | 58.33% | 44.44% | 36 | 9 | TAIR8 |
Avg. embryo expression (dissected): '46.7424' Avg. embryo expression (LCM): '92.3809' |
|||
| AT5G20040 | IPT9 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G20040 | IPT9 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.6327 x 10-2 | 13 | 3 | 81.25% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G20040 | IPT9 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.458 x 10-3 | 23 | 5 | 82.14% | 28 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G20030 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '37.7206' Avg. expression score in LCM sample: '19.3866' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G20030 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '24.4596' Avg. expression score in LCM sample: '19.3866' Tissue used: 'full endosperm' |
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| AT5G20030 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '7.52604' Avg. embryo expression (LCM): '13.8019' |
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| AT5G20030 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G20030 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G20030 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G20020 | RAN2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '727.752' Avg. expression score in LCM sample: '584.257' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G20020 | RAN2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '469.283' Avg. expression score in LCM sample: '584.257' Tissue used: 'full endosperm' |
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| AT5G20020 | RAN2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '974.907' Avg. embryo expression (LCM): '1105.49' |
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| AT5G20020 | RAN2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20020 | RAN2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20020 | RAN2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20010 | RAN-1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1080.42' Avg. expression score in LCM sample: '761.911' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G20010 | RAN-1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '747.249' Avg. expression score in LCM sample: '761.911' Tissue used: 'full endosperm' |
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| AT5G20010 | RAN-1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1188.23' Avg. embryo expression (LCM): '792.986' |
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| AT5G20010 | RAN-1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20010 | RAN-1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20010 | RAN-1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G20000 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '112.621' Avg. expression score in LCM sample: '79.7215' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G20000 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '119.905' Avg. expression score in LCM sample: '79.7215' Tissue used: 'full endosperm' |
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| AT5G20000 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '139.322' Avg. embryo expression (LCM): '107.979' |
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| AT5G20000 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G20000 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G20000 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G19990 | RPT6A | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 68 | 20 | 38 | 50 | 77.27% | 56.82% | 88 | 88 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.131889' Avg. expression score for this sample: '428.059' Avg. expression score in LCM sample: '203.743' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G19990 | RPT6A | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.2419 x 10-2 | 149 | 42 | 72 | 152 | 78.01% | 67.86% | 191 | 224 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.131889' Avg. expression score for this sample: '385.511' Avg. expression score in LCM sample: '203.743' Tissue used: 'full endosperm' |
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| AT5G19990 | RPT6A | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.64153 x 10-1 | 69 | 51 | 11 | 19 | 57.50% | 63.33% | 120 | 30 | TAIR8 |
Avg. embryo expression (dissected): '714.425' Avg. embryo expression (LCM): '511.737' |
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| AT5G19990 | RPT6A | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.59358 x 10-1 | 44 | 13 | 77.19% | 57 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G19990 | RPT6A | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.21522 x 10-1 | 186 | 85 | 68.63% | 271 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G19990 | RPT6A | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.1 x 10-11 | 292 | 34 | 89.57% | 326 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G19980 | GONST4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '148.109' Avg. expression score in LCM sample: '29.0725' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G19980 | GONST4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '244.625' Avg. expression score in LCM sample: '29.0725' Tissue used: 'full endosperm' |