| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G587543 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.111 x 10-4 | 0 | 34 | 0 | 11 | 0.00% | 100.00% | 34 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.51e-09' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: 'Mo17' |
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| GRMZM2G587543 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G587368 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.438662 x 10-1 | 70 | 63 | 25 | 60 | 52.63% | 70.59% | 133 | 85 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5438662' χ2 p-value for Mo17 x B73: '.0001469' Biased in favor of strain: '' |
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| GRMZM2G587368 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.562328 x 10-1 | 126 | 54 | 55 | 111 | 70.00% | 66.87% | 180 | 166 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3428124' χ2 p-value for Mo17 x B73: '.9562328' Biased in favor of strain: '' |
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| GRMZM2G587327 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 51 | 31 | 31 | 31 | 62.20% | 50.00% | 82 | 62 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0272004' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G587327 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.407727 x 10-1 | 37 | 11 | 25 | 34 | 77.08% | 57.63% | 48 | 59 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1257933' χ2 p-value for Mo17 x B73: '.1407727' Biased in favor of strain: '' |
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| GRMZM2G587231 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 2 | 3 | 25.00% | 60.00% | 4 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM2G587231 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 0 | 0 | 80.00% | 5 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G584876 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.97 x 10-14 | 589 | 280 | 453 | 255 | 67.78% | 36.02% | 869 | 708 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.04e-25' χ2 p-value for Mo17 x B73: '9.97e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G584876 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 574 | 70 | 285 | 166 | 89.13% | 36.81% | 644 | 451 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.15e-33' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G581326 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.13 x 10-11 | 0 | 100 | 0 | 42 | 0.00% | 100.00% | 100 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.52e-23' χ2 p-value for Mo17 x B73: '9.13e-11' Biased in favor of strain: 'Mo17' |
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| GRMZM2G581326 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.111 x 10-4 | 0 | 20 | 0 | 22 | 0.00% | 100.00% | 20 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.54e-10' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: 'Mo17' |
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| GRMZM2G580853 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.828 x 10-4 | 0 | 14 | 0 | 38 | 0.00% | 100.00% | 14 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '7.07e-10' Biased in favor of strain: 'Mo17' |
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| GRMZM2G580853 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.64 x 10-7 | 0 | 22 | 0 | 53 | 0.00% | 100.00% | 22 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.28e-11' χ2 p-value for Mo17 x B73: '2.64e-07' Biased in favor of strain: 'Mo17' |
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| GRMZM2G578411 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.82 x 10-28 | 0 | 121 | 0 | 157 | 0.00% | 100.00% | 121 | 157 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.82e-28' χ2 p-value for Mo17 x B73: '5.12e-36' Biased in favor of strain: 'Mo17' |
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| GRMZM2G578411 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.13 x 10-11 | 0 | 44 | 0 | 84 | 0.00% | 100.00% | 44 | 84 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.54e-21' χ2 p-value for Mo17 x B73: '9.13e-11' Biased in favor of strain: 'Mo17' |
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| GRMZM2G578396 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.396494 x 10-1 | 38 | 62 | 27 | 39 | 38.00% | 59.09% | 100 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0163951' χ2 p-value for Mo17 x B73: '.1396494' Biased in favor of strain: '' |
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| GRMZM2G578396 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.12 x 10-7 | 6 | 31 | 1 | 54 | 16.22% | 98.18% | 37 | 55 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.52e-11' χ2 p-value for Mo17 x B73: '7.12e-07' Biased in favor of strain: 'Mo17' |
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| GRMZM2G578155 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.58 x 10-8 | 0 | 31 | 0 | 38 | 0.00% | 100.00% | 31 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.58e-08' χ2 p-value for Mo17 x B73: '7.07e-10' Biased in favor of strain: 'Mo17' |
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| GRMZM2G578155 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G577718 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G577718 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM2G577677 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.15 x 10-6 | 337 | 222 | 406 | 218 | 60.29% | 34.94% | 559 | 624 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.15e-06' χ2 p-value for Mo17 x B73: '5.23e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G577677 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.271156 x 10-1 | 56 | 24 | 25 | 41 | 70.00% | 62.12% | 80 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5271156' χ2 p-value for Mo17 x B73: '.4334217' Biased in favor of strain: '' |
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| GRMZM2G577405 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.1578 x 10-3 | 205 | 74 | 164 | 118 | 73.48% | 41.84% | 279 | 282 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.41e-15' χ2 p-value for Mo17 x B73: '.0061578' Biased in favor of strain: 'B73' |
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| GRMZM2G577405 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.472847 x 10-1 | 115 | 52 | 66 | 98 | 68.86% | 59.76% | 167 | 164 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5472847' χ2 p-value for Mo17 x B73: '.060472' Biased in favor of strain: '' |
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| GRMZM2G577191 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.266305 x 10-1 | 8 | 20 | 7 | 14 | 28.57% | 66.67% | 28 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0233422' χ2 p-value for Mo17 x B73: '.1266305' Biased in favor of strain: '' |
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| GRMZM2G577191 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 7 | 10 | 50.00% | 58.82% | 2 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.4927165' Biased in favor of strain: '' |
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| GRMZM2G575305 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 1 | 1 | 60.00% | 50.00% | 5 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G575305 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G574887 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 20 | 4 | 5 | 4 | 83.33% | 44.44% | 24 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0010908' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: '' |
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| GRMZM2G574887 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.33 x 10-5 | 61 | 0 | 14 | 4 | 100.00% | 22.22% | 61 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.34e-08' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: 'B73' |
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| GRMZM2G574858 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.42 x 10-6 | 53 | 10 | 43 | 9 | 84.13% | 17.31% | 63 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.04e-08' χ2 p-value for Mo17 x B73: '2.42e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G574858 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.1 x 10-6 | 45 | 0 | 30 | 3 | 100.00% | 9.09% | 45 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.10e-06' χ2 p-value for Mo17 x B73: '2.28e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G574782 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.73 x 10-19 | 865 | 528 | 1478 | 951 | 62.10% | 39.15% | 1393 | 2429 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.73e-19' χ2 p-value for Mo17 x B73: '1.10e-26' Biased in favor of strain: 'B73' |
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| GRMZM2G574782 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.652112 x 10-1 | 175 | 96 | 132 | 310 | 64.58% | 70.14% | 271 | 442 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4652112' χ2 p-value for Mo17 x B73: '.1218279' Biased in favor of strain: '' |
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| GRMZM2G573867 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.929801 x 10-1 | 66 | 60 | 69 | 53 | 52.38% | 43.44% | 126 | 122 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5929801' χ2 p-value for Mo17 x B73: '.1474572' Biased in favor of strain: '' |
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| GRMZM2G573867 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.020247 x 10-1 | 50 | 21 | 30 | 30 | 70.42% | 50.00% | 71 | 60 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5020247' χ2 p-value for Mo17 x B73: '.0061699' Biased in favor of strain: '' |
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| GRMZM2G573732 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.012767 x 10-1 | 155 | 181 | 163 | 170 | 46.13% | 51.05% | 336 | 333 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1560693' χ2 p-value for Mo17 x B73: '.7012767' Biased in favor of strain: '' |
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| GRMZM2G573732 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.08893 x 10-2 | 74 | 65 | 83 | 216 | 53.24% | 72.24% | 139 | 299 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000783' χ2 p-value for Mo17 x B73: '.0408893' Biased in favor of strain: '' |
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| GRMZM2G573072 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.34 x 10-13 | 75 | 0 | 53 | 0 | 100.00% | 0.00% | 75 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.71e-18' χ2 p-value for Mo17 x B73: '3.34e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G573072 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.07 x 10-18 | 149 | 0 | 54 | 0 | 100.00% | 0.00% | 149 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.07e-18' χ2 p-value for Mo17 x B73: '2.69e-25' Biased in favor of strain: 'B73' |
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| GRMZM2G571844 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.07 x 10-4 | 224 | 114 | 174 | 114 | 66.27% | 39.58% | 338 | 288 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.19e-09' χ2 p-value for Mo17 x B73: '.000407' Biased in favor of strain: 'B73' |
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| GRMZM2G571844 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.518449 x 10-1 | 14 | 6 | 17 | 17 | 70.00% | 50.00% | 20 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7518449' χ2 p-value for Mo17 x B73: '.0392503' Biased in favor of strain: '' |
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| GRMZM2G571316 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3406 x 10-3 | 20 | 2 | 13 | 1 | 90.91% | 7.14% | 22 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001242' χ2 p-value for Mo17 x B73: '.0013406' Biased in favor of strain: 'B73' |
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| GRMZM2G571316 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 1 | 100.00% | 100.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G570528 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.482131 x 10-1 | 6 | 11 | 8 | 4 | 35.29% | 33.33% | 17 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2252529' χ2 p-value for Mo17 x B73: '.2482131' Biased in favor of strain: '' |
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| GRMZM2G570528 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.054693 x 10-1 | 10 | 4 | 2 | 14 | 71.43% | 87.50% | 14 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7054693' χ2 p-value for Mo17 x B73: '.0770999' Biased in favor of strain: '' |
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| GRMZM2G569948 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.171082 x 10-1 | 522 | 438 | 304 | 313 | 54.38% | 50.73% | 960 | 617 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0067063' χ2 p-value for Mo17 x B73: '.7171082' Biased in favor of strain: '' |
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| GRMZM2G569948 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.299627 x 10-1 | 50 | 18 | 27 | 87 | 73.53% | 76.32% | 68 | 114 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2299627' χ2 p-value for Mo17 x B73: '.0288538' Biased in favor of strain: '' |
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| GRMZM2G569855 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.64 x 10-21 | 744 | 423 | 690 | 330 | 63.75% | 32.35% | 1167 | 1020 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.64e-21' χ2 p-value for Mo17 x B73: '1.80e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G569855 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.44 x 10-22 | 704 | 150 | 325 | 285 | 82.44% | 46.72% | 854 | 610 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.44e-22' χ2 p-value for Mo17 x B73: '1.47e-25' Biased in favor of strain: 'B73' |
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| GRMZM2G569356 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 19 | 0 | 0 | 8 | 100.00% | 100.00% | 19 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000131' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G569356 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 2.14 x 10-19 | 201 | 1 | 2 | 172 | 99.50% | 98.85% | 202 | 174 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.14e-23' χ2 p-value for Mo17 x B73: '2.14e-19' Biased in favor of strain: '' |
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| GRMZM2G568636 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.170751 x 10-1 | 9 | 7 | 18 | 11 | 56.25% | 37.93% | 16 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170751' χ2 p-value for Mo17 x B73: '.1936464' Biased in favor of strain: '' |
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| GRMZM2G568636 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G568484 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 6 | 0 | 10 | 0.00% | 100.00% | 6 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: '' |
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| GRMZM2G568484 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 9 | 0 | 14 | 0.00% | 100.00% | 9 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: '' |
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| GRMZM2G568478 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.94564 x 10-2 | 26 | 62 | 19 | 35 | 29.55% | 64.81% | 88 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001242' χ2 p-value for Mo17 x B73: '.0294564' Biased in favor of strain: 'Mo17' |
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| GRMZM2G568478 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.5515 x 10-3 | 0 | 10 | 0 | 17 | 0.00% | 100.00% | 10 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.74e-06' χ2 p-value for Mo17 x B73: '.0035515' Biased in favor of strain: 'Mo17' |
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| GRMZM2G567897 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.185458 x 10-1 | 469 | 462 | 356 | 403 | 50.38% | 53.10% | 931 | 759 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8185458' χ2 p-value for Mo17 x B73: '.0880096' Biased in favor of strain: '' |
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| GRMZM2G567897 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.47354 x 10-2 | 66 | 56 | 72 | 110 | 54.10% | 60.44% | 122 | 182 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0032305' χ2 p-value for Mo17 x B73: '.0747354' Biased in favor of strain: '' |
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| GRMZM2G567452 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.99 x 10-25 | 609 | 292 | 879 | 493 | 67.59% | 35.93% | 901 | 1372 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.53e-26' χ2 p-value for Mo17 x B73: '1.99e-25' Biased in favor of strain: 'B73' |
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| GRMZM2G567452 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G566804 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.19 x 10-13 | 539 | 321 | 510 | 304 | 62.67% | 37.35% | 860 | 814 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.06e-13' χ2 p-value for Mo17 x B73: '5.19e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G566804 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.01 x 10-18 | 673 | 158 | 476 | 366 | 80.99% | 43.47% | 831 | 842 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.01e-18' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G566786 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.657123 x 10-1 | 20 | 1 | 7 | 4 | 95.24% | 36.36% | 21 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000338' χ2 p-value for Mo17 x B73: '.3657123' Biased in favor of strain: '' |
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| GRMZM2G566786 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 17 | 2 | 7 | 2 | 89.47% | 22.22% | 19 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0349563' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G565140 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6367 x 10-3 | 749 | 870 | 582 | 759 | 46.26% | 56.60% | 1619 | 1341 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026367' χ2 p-value for Mo17 x B73: '1.34e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G565140 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.297142 x 10-1 | 153 | 137 | 162 | 279 | 52.76% | 63.27% | 290 | 441 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.05e-07' χ2 p-value for Mo17 x B73: '.1297142' Biased in favor of strain: '' |
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| GRMZM2G563726 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.919197 x 10-1 | 46 | 41 | 22 | 59 | 52.87% | 72.84% | 87 | 81 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5919197' χ2 p-value for Mo17 x B73: '.0000394' Biased in favor of strain: '' |
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| GRMZM2G563726 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.55343 x 10-2 | 34 | 43 | 20 | 73 | 44.16% | 78.49% | 77 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000279' χ2 p-value for Mo17 x B73: '.0155343' Biased in favor of strain: '' |
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| GRMZM2G561974 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.115 x 10-4 | 0 | 24 | 0 | 13 | 0.00% | 100.00% | 24 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.63e-07' χ2 p-value for Mo17 x B73: '.0003115' Biased in favor of strain: 'Mo17' |
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| GRMZM2G561974 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 5 | 0 | 12 | 0.00% | 100.00% | 5 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015653' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G561444 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.93 x 10-4 | 0 | 19 | 3 | 20 | 0.00% | 86.96% | 19 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000131' χ2 p-value for Mo17 x B73: '.000393' Biased in favor of strain: 'Mo17' |
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| GRMZM2G561444 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 7 | 0 | 18 | 0.00% | 100.00% | 7 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| GRMZM2G561067 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5815 x 10-3 | 30 | 6 | 38 | 15 | 83.33% | 28.30% | 36 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.0015815' Biased in favor of strain: 'B73' |
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| GRMZM2G561067 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.57 x 10-6 | 54 | 0 | 29 | 15 | 100.00% | 34.09% | 54 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.03e-07' χ2 p-value for Mo17 x B73: '4.57e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G560551 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 3 | 3 | 0 | 62.50% | 0.00% | 8 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G560551 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 1 | 0 | 0.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G559436 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.23434 x 10-2 | 58 | 34 | 46 | 21 | 63.04% | 31.34% | 92 | 67 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0123434' χ2 p-value for Mo17 x B73: '.0022563' Biased in favor of strain: 'B73' |
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| GRMZM2G559436 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.524742 x 10-1 | 36 | 15 | 47 | 54 | 70.59% | 53.47% | 51 | 101 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5524742' χ2 p-value for Mo17 x B73: '.004887' Biased in favor of strain: '' |
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| GRMZM2G558539 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.963458 x 10-1 | 126 | 105 | 141 | 124 | 54.55% | 46.79% | 231 | 265 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1670643' χ2 p-value for Mo17 x B73: '.2963458' Biased in favor of strain: '' |
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| GRMZM2G558539 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.091157 x 10-1 | 87 | 37 | 50 | 50 | 70.16% | 50.00% | 124 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4091157' χ2 p-value for Mo17 x B73: '.000407' Biased in favor of strain: '' |
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| GRMZM2G556667 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 14082 | 4140 | 10959 | 3359 | 77.28% | 23.46% | 18222 | 14318 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G556667 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 27072 | 3268 | 12577 | 6076 | 89.23% | 32.57% | 30340 | 18653 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G556522 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 0 | 0 | 100.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G556522 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G556131 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.648048 x 10-1 | 158 | 147 | 127 | 134 | 51.80% | 51.34% | 305 | 261 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5287874' χ2 p-value for Mo17 x B73: '.6648048' Biased in favor of strain: '' |
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| GRMZM2G556131 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.681596 x 10-1 | 68 | 25 | 35 | 60 | 73.12% | 63.16% | 93 | 95 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1869076' χ2 p-value for Mo17 x B73: '.4681596' Biased in favor of strain: '' |
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| GRMZM2G556094 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 4 | 0 | 100.00% | 0.00% | 8 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G556094 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G555972 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.34454 x 10-1 | 133 | 40 | 73 | 56 | 76.88% | 43.41% | 173 | 129 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.54e-12' χ2 p-value for Mo17 x B73: '.134454' Biased in favor of strain: '' |
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| GRMZM2G555972 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.463941 x 10-1 | 103 | 60 | 67 | 101 | 63.19% | 60.12% | 163 | 168 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3463941' χ2 p-value for Mo17 x B73: '.0718136' Biased in favor of strain: '' |
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| GRMZM2G555108 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.34 x 10-10 | 366 | 183 | 310 | 174 | 66.67% | 35.95% | 549 | 484 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.71e-15' χ2 p-value for Mo17 x B73: '6.34e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G555108 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.889163 x 10-1 | 245 | 132 | 166 | 209 | 64.99% | 55.73% | 377 | 375 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4889163' χ2 p-value for Mo17 x B73: '7.08e-06' Biased in favor of strain: '' |
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| GRMZM2G554962 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.86714 x 10-2 | 31 | 16 | 23 | 10 | 65.96% | 30.30% | 47 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0286714' χ2 p-value for Mo17 x B73: '.0236351' Biased in favor of strain: 'B73' |
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| GRMZM2G554962 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G554914 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.116827 x 10-1 | 51 | 46 | 51 | 34 | 52.58% | 40.00% | 97 | 85 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6116827' χ2 p-value for Mo17 x B73: '.0651964' Biased in favor of strain: '' |
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| GRMZM2G554914 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.16927 x 10-1 | 55 | 29 | 6 | 46 | 65.48% | 88.46% | 84 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.816927' χ2 p-value for Mo17 x B73: '.0008561' Biased in favor of strain: '' |