GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G062738	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.61 x 10^-7	85	31	127	60	73.28%	32.09%	116	187	RefGen V2	χ2 p-value for B73 x Mo17: '5.34e-07' χ2 p-value for Mo17 x B73: '9.61e-07' Biased in favor of strain: 'B73'
GRMZM2G062738	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.566 x 10^-4	67	8	36	30	89.33%	45.45%	75	66	RefGen V2	χ2 p-value for B73 x Mo17: '.0000313' χ2 p-value for Mo17 x B73: '.0002566' Biased in favor of strain: 'B73'
GRMZM2G062683	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	8	1	83.33%	11.11%	6	9	RefGen V2	χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.000407' Biased in favor of strain: ''
GRMZM2G062683	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	3	1	100.00%	25.00%	5	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G062673	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.4627 x 10^-3	42	12	25	7	77.78%	21.88%	54	32	RefGen V2	χ2 p-value for B73 x Mo17: '.0000446' χ2 p-value for Mo17 x B73: '.0014627' Biased in favor of strain: 'B73'
GRMZM2G062673	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.083431 x 10^-1	22	12	31	58	64.71%	65.17%	34	89	RefGen V2	χ2 p-value for B73 x Mo17: '.8083431' χ2 p-value for Mo17 x B73: '.7643197' Biased in favor of strain: ''
GRMZM2G062657	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.56494 x 10^-2	48	62	103	158	43.64%	60.54%	110	261	RefGen V2	χ2 p-value for B73 x Mo17: '2.99e-07' χ2 p-value for Mo17 x B73: '.0356494' Biased in favor of strain: ''
GRMZM2G062657	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.12 x 10^-11	250	121	254	105	67.39%	29.25%	371	359	RefGen V2	χ2 p-value for B73 x Mo17: '2.12e-11' χ2 p-value for Mo17 x B73: '3.72e-15' Biased in favor of strain: 'B73'
GRMZM2G062650	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	0.0	11005	419	176	5140	96.33%	96.69%	11424	5316	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G062650	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	0.0	93607	6672	2488	70441	93.35%	96.59%	100279	72929	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G062641	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.361255 x 10^-1	45	19	45	61	70.31%	57.55%	64	106	RefGen V2	χ2 p-value for B73 x Mo17: '.5361255' χ2 p-value for Mo17 x B73: '.0464008' Biased in favor of strain: ''
GRMZM2G062641	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.772893 x 10^-1	67	55	41	29	54.92%	41.43%	122	70	RefGen V2	χ2 p-value for B73 x Mo17: '.2772893' χ2 p-value for Mo17 x B73: '.151494' Biased in favor of strain: ''
GRMZM2G062638	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.155 x 10^-4	424	278	365	268	60.40%	42.34%	702	633	RefGen V2	χ2 p-value for B73 x Mo17: '3.58e-08' χ2 p-value for Mo17 x B73: '.0001155' Biased in favor of strain: 'B73'
GRMZM2G062638	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.39 x 10^-5	544	191	276	372	74.01%	57.41%	735	648	RefGen V2	χ2 p-value for B73 x Mo17: '.0000239' χ2 p-value for Mo17 x B73: '5.73e-07' Biased in favor of strain: 'B73'
GRMZM2G062618	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G062618	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.76422 x 10^-1	148	136	115	189	52.11%	62.17%	284	304	RefGen V2	χ2 p-value for B73 x Mo17: '.476422' χ2 p-value for Mo17 x B73: '.0000219' Biased in favor of strain: ''
GRMZM2G062613	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.55003 x 10^-2	12	4	15	2	75.00%	11.76%	16	17	RefGen V2	χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0016162' Biased in favor of strain: 'B73'
GRMZM2G062613	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	4	2	83.33%	33.33%	6	6	RefGen V2	χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G062591	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.5643 x 10^-3	217	75	100	137	74.32%	57.81%	292	237	RefGen V2	χ2 p-value for B73 x Mo17: '.0055643' χ2 p-value for Mo17 x B73: '.0038075' Biased in favor of strain: 'B73'
GRMZM2G062591	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.626117 x 10^-1	242	178	201	216	57.62%	51.80%	420	417	RefGen V2	χ2 p-value for B73 x Mo17: '.0017909' χ2 p-value for Mo17 x B73: '.4626117' Biased in favor of strain: ''
GRMZM2G062585	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	5	4	5	64.29%	55.56%	14	9	RefGen V2	χ2 p-value for B73 x Mo17: '.2850494' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: ''
GRMZM2G062585	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	1	100.00%	100.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G062577	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.408 x 10^-4	84	11	33	25	88.42%	43.10%	95	58	RefGen V2	χ2 p-value for B73 x Mo17: '6.86e-06' χ2 p-value for Mo17 x B73: '.0001408' Biased in favor of strain: 'B73'
GRMZM2G062577	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1741	680	2159	853	71.91%	28.32%	2421	3012	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G062559	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.6777 x 10^-3	48	24	13	40	66.67%	75.47%	72	53	RefGen V2	χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.0002083' Biased in favor of strain: ''
GRMZM2G062559	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.1875 x 10^-3	820	341	438	496	70.63%	53.10%	1161	934	RefGen V2	χ2 p-value for B73 x Mo17: '.0041875' χ2 p-value for Mo17 x B73: '1.47e-18' Biased in favor of strain: 'B73'
GRMZM2G062555	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.36 x 10^-28	944	206	561	471	82.09%	45.64%	1150	1032	RefGen V2	χ2 p-value for B73 x Mo17: '1.36e-28' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G062555	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1513	536	1510	669	73.84%	30.70%	2049	2179	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G062552	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.11 x 10^-5	1054	544	729	585	65.96%	44.52%	1598	1314	RefGen V2	χ2 p-value for B73 x Mo17: '2.81e-37' χ2 p-value for Mo17 x B73: '.0000711' Biased in favor of strain: 'B73'
GRMZM2G062552	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.49 x 10^-7	1620	509	716	1123	76.09%	61.07%	2129	1839	RefGen V2	χ2 p-value for B73 x Mo17: '2.83e-20' χ2 p-value for Mo17 x B73: '3.49e-07' Biased in favor of strain: 'B73'
GRMZM2G062527	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.868517 x 10^-1	55	42	64	40	56.70%	38.46%	97	104	RefGen V2	χ2 p-value for B73 x Mo17: '.1868517' χ2 p-value for Mo17 x B73: '.0186029' Biased in favor of strain: ''
GRMZM2G062527	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G062524	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.038569 x 10^-1	98	81	110	76	54.75%	40.86%	179	186	RefGen V2	χ2 p-value for B73 x Mo17: '.2038569' χ2 p-value for Mo17 x B73: '.0126669' Biased in favor of strain: ''
GRMZM2G062524	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.267895 x 10^-1	7	6	16	18	53.85%	52.94%	13	34	RefGen V2	χ2 p-value for B73 x Mo17: '.3267895' χ2 p-value for Mo17 x B73: '.089555' Biased in favor of strain: ''
GRMZM2G062499	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.08861 x 10^-2	532	326	373	847	62.00%	69.43%	858	1220	RefGen V2	χ2 p-value for B73 x Mo17: '.0037678' χ2 p-value for Mo17 x B73: '.0408861' Biased in favor of strain: ''
GRMZM2G062499	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.39 x 10^-10	615	403	511	329	60.41%	39.17%	1018	840	RefGen V2	χ2 p-value for B73 x Mo17: '3.04e-11' χ2 p-value for Mo17 x B73: '3.39e-10' Biased in favor of strain: 'B73'
GRMZM2G062495	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.71 x 10^-15	85	0	61	0	100.00%	0.00%	85	61	RefGen V2	χ2 p-value for B73 x Mo17: '2.98e-20' χ2 p-value for Mo17 x B73: '5.71e-15' Biased in favor of strain: 'B73'
GRMZM2G062495	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.55 x 10^-13	140	0	26	0	100.00%	0.00%	140	26	RefGen V2	χ2 p-value for B73 x Mo17: '5.93e-17' χ2 p-value for Mo17 x B73: '5.55e-13' Biased in favor of strain: 'B73'
GRMZM2G062488	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.61845 x 10^-2	45	65	48	143	40.91%	74.87%	110	191	RefGen V2	χ2 p-value for B73 x Mo17: '1.00e-08' χ2 p-value for Mo17 x B73: '.0161845' Biased in favor of strain: ''
GRMZM2G062488	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.324088 x 10^-1	289	177	257	224	62.02%	46.57%	466	481	RefGen V2	χ2 p-value for B73 x Mo17: '2.12e-07' χ2 p-value for Mo17 x B73: '.1324088' Biased in favor of strain: ''
GRMZM2G062481	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.57 x 10^-9	378	231	350	195	62.07%	35.78%	609	545	RefGen V2	χ2 p-value for B73 x Mo17: '2.57e-09' χ2 p-value for Mo17 x B73: '3.15e-11' Biased in favor of strain: 'B73'
GRMZM2G062481	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.961827 x 10^-1	53	29	27	64	64.63%	70.33%	82	91	RefGen V2	χ2 p-value for B73 x Mo17: '.6961827' χ2 p-value for Mo17 x B73: '.4585426' Biased in favor of strain: ''
GRMZM2G062476	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.19835 x 10^-2	204	229	160	377	47.11%	70.20%	433	537	RefGen V2	χ2 p-value for B73 x Mo17: '6.06e-18' χ2 p-value for Mo17 x B73: '.0819835' Biased in favor of strain: ''
GRMZM2G062476	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.54 x 10^-12	530	317	546	336	62.57%	38.10%	847	882	RefGen V2	χ2 p-value for B73 x Mo17: '2.50e-13' χ2 p-value for Mo17 x B73: '1.54e-12' Biased in favor of strain: 'B73'
GRMZM2G062471	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.09515 x 10^-2	27	42	22	47	39.13%	68.12%	69	69	RefGen V2	χ2 p-value for B73 x Mo17: '.0709515' χ2 p-value for Mo17 x B73: '.0026155' Biased in favor of strain: ''
GRMZM2G062471	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	0	22	0	100.00%	0.00%	8	22	RefGen V2	χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '3.28e-11' Biased in favor of strain: ''
GRMZM2G062470	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	3	0		0.00%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G062470	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	0	10	4	100.00%	28.57%	8	14	RefGen V2	χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.1088094' Biased in favor of strain: ''
GRMZM2G062453	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	5	0	3	0.00%	100.00%	5	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G062453	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	9		100.00%	0	9	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G062452	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.270671 x 10^-1	28	17	31	51	62.22%	62.20%	45	82	RefGen V2	χ2 p-value for B73 x Mo17: '.5270671' χ2 p-value for Mo17 x B73: '.3903647' Biased in favor of strain: ''
GRMZM2G062452	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.272594 x 10^-1	33	14	10	11	70.21%	52.38%	47	21	RefGen V2	χ2 p-value for B73 x Mo17: '.005581' χ2 p-value for Mo17 x B73: '.8272594' Biased in favor of strain: ''
GRMZM2G062429	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.526473 x 10^-1	179	158	169	128	53.12%	43.10%	337	297	RefGen V2	χ2 p-value for B73 x Mo17: '.2526473' χ2 p-value for Mo17 x B73: '.0173568' Biased in favor of strain: ''
GRMZM2G062429	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.49477 x 10^-2	5	10	10	39	33.33%	79.59%	15	49	RefGen V2	χ2 p-value for B73 x Mo17: '.0061694' χ2 p-value for Mo17 x B73: '.0549477' Biased in favor of strain: ''
GRMZM2G062425	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.13 x 10^-12	1030	333	588	615	75.57%	51.12%	1363	1203	RefGen V2	χ2 p-value for B73 x Mo17: '3.13e-12' χ2 p-value for Mo17 x B73: '2.73e-30' Biased in favor of strain: 'B73'
GRMZM2G062425	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.12 x 10^-9	902	642	701	494	58.42%	41.34%	1544	1195	RefGen V2	χ2 p-value for B73 x Mo17: '3.67e-11' χ2 p-value for Mo17 x B73: '2.12e-09' Biased in favor of strain: 'B73'
GRMZM2G062424	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.221988 x 10^-1	107	93	111	127	53.50%	53.36%	200	238	RefGen V2	χ2 p-value for B73 x Mo17: '.3221988' χ2 p-value for Mo17 x B73: '.2996772' Biased in favor of strain: ''
GRMZM2G062424	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.465071 x 10^-1	16	6	8	10	72.73%	55.56%	22	18	RefGen V2	χ2 p-value for B73 x Mo17: '.5465071' χ2 p-value for Mo17 x B73: '.3173104' Biased in favor of strain: ''
GRMZM2G062420	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.29 x 10^-5	101	17	61	18	85.59%	22.78%	118	79	RefGen V2	χ2 p-value for B73 x Mo17: '.0000129' χ2 p-value for Mo17 x B73: '1.30e-16' Biased in favor of strain: 'B73'
GRMZM2G062420	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.263541 x 10^-1	244	166	204	217	59.51%	51.54%	410	421	RefGen V2	χ2 p-value for B73 x Mo17: '.0001171' χ2 p-value for Mo17 x B73: '.5263541' Biased in favor of strain: ''
GRMZM2G062416	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.898 x 10^-3	104	150	133	186	40.94%	58.31%	254	319	RefGen V2	χ2 p-value for B73 x Mo17: '.003898' χ2 p-value for Mo17 x B73: '.003003' Biased in favor of strain: 'Mo17'
GRMZM2G062416	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.03 x 10^-6	4	29	7	71	12.12%	91.03%	33	78	RefGen V2	χ2 p-value for B73 x Mo17: '2.99e-11' χ2 p-value for Mo17 x B73: '5.03e-06' Biased in favor of strain: 'Mo17'
GRMZM2G062396	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		145	0	0	8	100.00%	100.00%	145	8	RefGen V2	χ2 p-value for B73 x Mo17: '1.67e-17' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G062396	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.29 x 10^-24	200	0	106	1	100.00%	0.93%	200	107	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.29e-24' Biased in favor of strain: 'B73'
GRMZM2G062394	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.142162 x 10^-1	59	38	30	24	60.82%	44.44%	97	54	RefGen V2	χ2 p-value for B73 x Mo17: '.0329882' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: ''
GRMZM2G062394	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.120428 x 10^-1	27	14	19	31	65.85%	62.00%	41	50	RefGen V2	χ2 p-value for B73 x Mo17: '.9120428' χ2 p-value for Mo17 x B73: '.4839271' Biased in favor of strain: ''
GRMZM2G062391	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.922501 x 10^-1	94	39	37	72	70.68%	66.06%	133	109	RefGen V2	χ2 p-value for B73 x Mo17: '.3266068' χ2 p-value for Mo17 x B73: '.8922501' Biased in favor of strain: ''
GRMZM2G062391	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.333757 x 10^-1	121	61	66	53	66.48%	44.54%	182	119	RefGen V2	χ2 p-value for B73 x Mo17: '8.69e-06' χ2 p-value for Mo17 x B73: '.2333757' Biased in favor of strain: ''
GRMZM2G062390	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.79 x 10^-5	197	301	184	276	39.56%	60.00%	498	460	RefGen V2	χ2 p-value for B73 x Mo17: '3.16e-06' χ2 p-value for Mo17 x B73: '.0000179' Biased in favor of strain: 'Mo17'
GRMZM2G062390	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.917193 x 10^-1	186	78	169	111	70.45%	39.64%	264	280	RefGen V2	χ2 p-value for B73 x Mo17: '.1917193' χ2 p-value for Mo17 x B73: '8.60e-22' Biased in favor of strain: ''
GRMZM2G062377	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.807317 x 10^-1	211	141	88	189	59.94%	68.23%	352	277	RefGen V2	χ2 p-value for B73 x Mo17: '.0074504' χ2 p-value for Mo17 x B73: '.5807317' Biased in favor of strain: ''
GRMZM2G062377	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.135358 x 10^-1	381	288	376	366	56.95%	49.33%	669	742	RefGen V2	χ2 p-value for B73 x Mo17: '.0003237' χ2 p-value for Mo17 x B73: '.7135358' Biased in favor of strain: ''
GRMZM2G062373	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.47 x 10^-10	276	120	247	127	69.70%	33.96%	396	374	RefGen V2	χ2 p-value for B73 x Mo17: '4.53e-15' χ2 p-value for Mo17 x B73: '5.47e-10' Biased in favor of strain: 'B73'
GRMZM2G062373	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.340739 x 10^-1	49	24	44	69	67.12%	61.06%	73	113	RefGen V2	χ2 p-value for B73 x Mo17: '.9340739' χ2 p-value for Mo17 x B73: '.2062797' Biased in favor of strain: ''
GRMZM2G062357	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.05443 x 10^-2	91	16	64	84	85.05%	56.76%	107	148	RefGen V2	χ2 p-value for B73 x Mo17: '.000055' χ2 p-value for Mo17 x B73: '.0105443' Biased in favor of strain: ''
GRMZM2G062357	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.09 x 10^-13	242	106	323	146	69.54%	31.13%	348	469	RefGen V2	χ2 p-value for B73 x Mo17: '3.09e-13' χ2 p-value for Mo17 x B73: '3.01e-16' Biased in favor of strain: 'B73'
GRMZM2G062354	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.44073 x 10^-2	578	396	352	290	59.34%	45.17%	974	642	RefGen V2	χ2 p-value for B73 x Mo17: '5.49e-09' χ2 p-value for Mo17 x B73: '.0144073' Biased in favor of strain: 'B73'
GRMZM2G062354	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.52 x 10^-21	1809	525	823	1068	77.51%	56.48%	2334	1891	RefGen V2	χ2 p-value for B73 x Mo17: '1.14e-28' χ2 p-value for Mo17 x B73: '5.52e-21' Biased in favor of strain: 'B73'
GRMZM2G062342	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.024705 x 10^-1	24	3	5	22	88.89%	81.48%	27	27	RefGen V2	χ2 p-value for B73 x Mo17: '.0143065' χ2 p-value for Mo17 x B73: '.1024705' Biased in favor of strain: ''
GRMZM2G062342	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.12701 x 10^-2	48	14	31	14	77.42%	31.11%	62	45	RefGen V2	χ2 p-value for B73 x Mo17: '.0000157' χ2 p-value for Mo17 x B73: '.0112701' Biased in favor of strain: 'B73'
GRMZM2G062333	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.03 x 10^-20	393	166	291	109	70.30%	27.25%	559	400	RefGen V2	χ2 p-value for B73 x Mo17: '7.91e-22' χ2 p-value for Mo17 x B73: '9.03e-20' Biased in favor of strain: 'B73'
GRMZM2G062333	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.42 x 10^-7	125	18	148	74	87.41%	33.33%	143	222	RefGen V2	χ2 p-value for B73 x Mo17: '1.42e-07' χ2 p-value for Mo17 x B73: '5.92e-26' Biased in favor of strain: 'B73'
GRMZM2G062318	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G062318	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.96 x 10^-4	233	166	247	108	58.40%	30.42%	399	355	RefGen V2	χ2 p-value for B73 x Mo17: '.000796' χ2 p-value for Mo17 x B73: '1.61e-13' Biased in favor of strain: 'B73'
GRMZM2G062289	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.08128 x 10^-2	484	277	278	237	63.60%	46.02%	761	515	RefGen V2	χ2 p-value for B73 x Mo17: '6.20e-14' χ2 p-value for Mo17 x B73: '.0708128' Biased in favor of strain: ''
GRMZM2G062289	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.84 x 10^-14	586	149	307	314	79.73%	50.56%	735	621	RefGen V2	χ2 p-value for B73 x Mo17: '5.84e-14' χ2 p-value for Mo17 x B73: '1.70e-17' Biased in favor of strain: 'B73'
GRMZM2G062283	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.838938 x 10^-1	11	4	100	11	73.33%	9.91%	15	111	RefGen V2	χ2 p-value for B73 x Mo17: '.5838938' χ2 p-value for Mo17 x B73: '7.18e-37' Biased in favor of strain: ''
GRMZM2G062283	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	4	2	3	42.86%	60.00%	7	5	RefGen V2	χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''
GRMZM2G062268	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.22916 x 10^-1	123	139	115	191	46.95%	62.42%	262	306	RefGen V2	χ2 p-value for B73 x Mo17: '.322916' χ2 p-value for Mo17 x B73: '.000014' Biased in favor of strain: ''
GRMZM2G062268	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.844 x 10^-4	104	129	45	167	44.64%	78.77%	233	212	RefGen V2	χ2 p-value for B73 x Mo17: '9.75e-13' χ2 p-value for Mo17 x B73: '.0001844' Biased in favor of strain: 'Mo17'
GRMZM2G062260	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	8.378 x 10^-3	142	100	85	78	58.68%	47.85%	242	163	RefGen V2	χ2 p-value for B73 x Mo17: '.008378' χ2 p-value for Mo17 x B73: '3.48e-07' Biased in favor of strain: ''
GRMZM2G062260	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.407483 x 10^-1	60	163	90	91	26.91%	50.28%	223	181	RefGen V2	χ2 p-value for B73 x Mo17: '5.30e-12' χ2 p-value for Mo17 x B73: '.9407483' Biased in favor of strain: ''
GRMZM2G062245	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.33 x 10^-5	26	0	16	0	100.00%	0.00%	26	16	RefGen V2	χ2 p-value for B73 x Mo17: '3.41e-07' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: 'B73'
GRMZM2G062245	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5655 x 10^-3	20	0	15	0	100.00%	0.00%	20	15	RefGen V2	χ2 p-value for B73 x Mo17: '.0015655' χ2 p-value for Mo17 x B73: '4.32e-08' Biased in favor of strain: 'B73'
GRMZM2G062230	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.4534 x 10^-3	325	121	205	304	72.87%	59.72%	446	509	RefGen V2	χ2 p-value for B73 x Mo17: '.0054534' χ2 p-value for Mo17 x B73: '.000893' Biased in favor of strain: 'B73'
GRMZM2G062230	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.188542 x 10^-1	429	320	327	302	57.28%	48.01%	749	629	RefGen V2	χ2 p-value for B73 x Mo17: '.0000681' χ2 p-value for Mo17 x B73: '.3188542' Biased in favor of strain: ''
GRMZM2G062210	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2184	1207	1797	1150	64.41%	39.02%	3391	2947	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '9.50e-33' Biased in favor of strain: 'B73'
GRMZM2G062210	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	4292	1316	2433	2766	76.53%	53.20%	5608	5199	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G062199	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.511813 x 10^-1	79	35	62	50	69.30%	44.64%	114	112	RefGen V2	χ2 p-value for B73 x Mo17: '.5511813' χ2 p-value for Mo17 x B73: '7.64e-07' Biased in favor of strain: ''
GRMZM2G062199	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.4472 x 10^-3	153	87	160	113	63.75%	41.39%	240	273	RefGen V2	χ2 p-value for B73 x Mo17: '.0000204' χ2 p-value for Mo17 x B73: '.0044472' Biased in favor of strain: 'B73'

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