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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G20620 UBQ4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.89854 x 10-1 372 85 81.40% 457 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20620 UBQ4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.49984 x 10-1 221 69 76.21% 290 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.7907 x 10-2 232 82 95 219 73.89% 69.75% 314 314 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000011'
Avg. expression score for this sample: '169.625'
Avg. expression score in LCM sample: '79.3246'
Tissue used: 'pure endosperm, no chalazal'
AT5G20610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.3 x 10-5 384 179 234 748 68.21% 76.17% 563 982 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000011'
Avg. expression score for this sample: '254.521'
Avg. expression score in LCM sample: '79.3246'
Tissue used: 'full endosperm'
AT5G20610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.57394 x 10-1 120 148 47 57 44.78% 54.81% 268 104 TAIR8 Avg. embryo expression (dissected): '178.676'
Avg. embryo expression (LCM): '124.255'
AT5G20610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.22636 x 10-1 83 42 66.40% 125 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 450 168 72.82% 618 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4 x 10-7 615 134 82.11% 749 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.20988 x 10-1 49 27 34 63 64.47% 64.95% 76 97 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000035'
Avg. expression score for this sample: '224.888'
Avg. expression score in LCM sample: '146.582'
Tissue used: 'pure endosperm, no chalazal'
AT5G20600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.0 x 10-6 297 123 165 584 70.71% 77.97% 420 749 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000035'
Avg. expression score for this sample: '402.298'
Avg. expression score in LCM sample: '146.582'
Tissue used: 'full endosperm'
AT5G20600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.89274 x 10-1 98 94 28 31 51.04% 52.54% 192 59 TAIR8 Avg. embryo expression (dissected): '485.7'
Avg. embryo expression (LCM): '563.955'
AT5G20600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.4898 x 10-2 64 34 65.31% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.48214 x 10-1 837 307 73.16% 1144 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-14 1004 161 86.18% 1165 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20590 TBL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.56127 x 10-1 27 15 14 39 64.29% 73.58% 42 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.912913'
Avg. expression score for this sample: '68.2317'
Avg. expression score in LCM sample: '48.6648'
Tissue used: 'pure endosperm, no chalazal'
AT5G20590 TBL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.44877 x 10-1 29 21 14 28 58.00% 66.67% 50 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.912913'
Avg. expression score for this sample: '67.5076'
Avg. expression score in LCM sample: '48.6648'
Tissue used: 'full endosperm'
AT5G20590 TBL5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.69341 x 10-1 28 33 16 16 45.90% 50.00% 61 32 TAIR8 Avg. embryo expression (dissected): '101.334'
Avg. embryo expression (LCM): '92.4688'
AT5G20590 TBL5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.01021 x 10-1 5 6 45.45% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20590 TBL5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.26508 x 10-1 16 3 84.21% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20590 TBL5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.75776 x 10-1 8 8 50.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.11194 x 10-1 5 3 1 9 62.50% 90.00% 8 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.835369'
Avg. expression score for this sample: '11.1807'
Avg. expression score in LCM sample: '1.04355'
Tissue used: 'pure endosperm, no chalazal'
AT5G20580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 16 6 6 7 72.73% 53.85% 22 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.835369'
Avg. expression score for this sample: '17.3751'
Avg. expression score in LCM sample: '1.04355'
Tissue used: 'full endosperm'
AT5G20580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 12 10 1 1 54.55% 50.00% 22 2 TAIR8 Avg. embryo expression (dissected): '9.75097'
Avg. embryo expression (LCM): '9.82081'
AT5G20580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.5807 x 10-1 15 4 78.95% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.11 x 10-4 38 0 100.00% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20570 RBX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '307.446'
Avg. expression score in LCM sample: '111.249'
Tissue used: 'pure endosperm, no chalazal'
AT5G20570 RBX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 2 2 100.00% 50.00% 1 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '312.76'
Avg. expression score in LCM sample: '111.249'
Tissue used: 'full endosperm'
AT5G20570 RBX1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '255.974'
Avg. embryo expression (LCM): '340.011'
AT5G20570 RBX1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20570 RBX1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 11 6 64.71% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20570 RBX1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.58072 x 10-1 17 4 80.95% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G20560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.35265'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G20560 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.286596'
Avg. embryo expression (LCM): '0'
AT5G20560 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20560 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20560 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.25 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.41424'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G20550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.14687'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G20550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.601322'
Avg. embryo expression (LCM): '1.01724'
AT5G20550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20540 BRXL4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.79791 x 10-1 45 16 17 40 73.77% 70.18% 61 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.686781'
Avg. expression score for this sample: '119.595'
Avg. expression score in LCM sample: '74.0628'
Tissue used: 'pure endosperm, no chalazal'
AT5G20540 BRXL4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.36733 x 10-1 59 41 46 77 59.00% 62.60% 100 123 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.686781'
Avg. expression score for this sample: '106.154'
Avg. expression score in LCM sample: '74.0628'
Tissue used: 'full endosperm'
AT5G20540 BRXL4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 21 18 10 6 53.85% 37.50% 39 16 TAIR8 Avg. embryo expression (dissected): '114.962'
Avg. embryo expression (LCM): '96.9899'
AT5G20540 BRXL4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.78503 x 10-1 13 11 54.17% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20540 BRXL4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.0407 x 10-2 28 7 80.00% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20540 BRXL4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.684 x 10-3 67 16 80.72% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20520 WAV2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '195.365'
Avg. expression score in LCM sample: '130.65'
Tissue used: 'pure endosperm, no chalazal'
AT5G20520 WAV2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '196.605'
Avg. expression score in LCM sample: '130.65'
Tissue used: 'full endosperm'
AT5G20520 WAV2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '165.344'
Avg. embryo expression (LCM): '97.6806'
AT5G20520 WAV2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20520 WAV2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20520 WAV2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20510 AL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '344.051'
Avg. expression score in LCM sample: '49.091'
Tissue used: 'pure endosperm, no chalazal'
AT5G20510 AL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '377.954'
Avg. expression score in LCM sample: '49.091'
Tissue used: 'full endosperm'
AT5G20510 AL5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '438.303'
Avg. embryo expression (LCM): '307.183'
AT5G20510 AL5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20510 AL5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20510 AL5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.04891 x 10-1 58 20 31 50 74.36% 61.73% 78 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.08404'
Avg. expression score for this sample: '163.66'
Avg. expression score in LCM sample: '155.915'
Tissue used: 'pure endosperm, no chalazal'
AT5G20500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.1191 x 10-2 107 27 60 140 79.85% 70.00% 134 200 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.08404'
Avg. expression score for this sample: '268.361'
Avg. expression score in LCM sample: '155.915'
Tissue used: 'full endosperm'
AT5G20500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.0998 x 10-1 35 28 4 7 55.56% 63.64% 63 11 TAIR8 Avg. embryo expression (dissected): '112.778'
Avg. embryo expression (LCM): '211.599'
AT5G20500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 66 25 72.53% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4353 x 10-2 172 41 80.75% 213 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-13 253 18 93.36% 271 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20490 XIK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.39468 x 10-1 26 5 10 16 83.87% 61.54% 31 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.067186'
Avg. expression score for this sample: '86.8432'
Avg. expression score in LCM sample: '50.4579'
Tissue used: 'pure endosperm, no chalazal'
AT5G20490 XIK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2432 x 10-1 26 14 10 55 65.00% 84.62% 40 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.067186'
Avg. expression score for this sample: '149.834'
Avg. expression score in LCM sample: '50.4579'
Tissue used: 'full endosperm'
AT5G20490 XIK embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.96107 x 10-1 15 10 3 2 60.00% 40.00% 25 5 TAIR8 Avg. embryo expression (dissected): '70.9566'
Avg. embryo expression (LCM): '62.5417'
AT5G20490 XIK endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20490 XIK endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3184 x 10-1 67 12 84.81% 79 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20490 XIK endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.547 x 10-3 84 9 90.32% 93 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20480 EFR endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 3 100.00% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.102941'
Avg. expression score for this sample: '1.70827'
Avg. expression score in LCM sample: '.881875'
Tissue used: 'pure endosperm, no chalazal'
AT5G20480 EFR endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.54545 x 10-1 3 0 0 3 100.00% 100.00% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.102941'
Avg. expression score for this sample: '4.48345'
Avg. expression score in LCM sample: '.881875'
Tissue used: 'full endosperm'
AT5G20480 EFR embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '1.28519'
Avg. embryo expression (LCM): '.753515'
AT5G20480 EFR endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20480 EFR endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.57143 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20480 EFR endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 24 0 100.00% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20470 HDK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G20470 HDK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.10919'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G20470 HDK embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G20470 HDK endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20470 HDK endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20470 HDK endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 3 0 2 40.00% 100.00% 5 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.438433'
Avg. expression score for this sample: '6.84661'
Avg. expression score in LCM sample: '9.73002'
Tissue used: 'pure endosperm, no chalazal'
AT5G20460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.10526 x 10-1 3 0 0 7 100.00% 100.00% 3 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.438433'
Avg. expression score for this sample: '8.02183'
Avg. expression score in LCM sample: '9.73002'
Tissue used: 'full endosperm'
AT5G20460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '3.84531'
Avg. embryo expression (LCM): '0'
AT5G20460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.48113 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.39243 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '10.6177'
Avg. expression score in LCM sample: '4.11542'
Tissue used: 'pure endosperm, no chalazal'
AT5G20450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '10.4759'
Avg. expression score in LCM sample: '4.11542'
Tissue used: 'full endosperm'
AT5G20450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '10.5031'
Avg. embryo expression (LCM): '11.4032'
AT5G20450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G20447 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.61648'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G20447 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'