GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G063511	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.108226 x 10^-1	52	22	70	69	70.27%	49.64%	74	139	RefGen V2	χ2 p-value for B73 x Mo17: '.5108226' χ2 p-value for Mo17 x B73: '.0000206' Biased in favor of strain: ''
GRMZM2G063511	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.36573 x 10^-2	168	133	152	115	55.81%	43.07%	301	267	RefGen V2	χ2 p-value for B73 x Mo17: '.0436573' χ2 p-value for Mo17 x B73: '.0235518' Biased in favor of strain: 'B73'
GRMZM2G063503	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.59 x 10^-7	618	413	591	424	59.94%	41.77%	1031	1015	RefGen V2	χ2 p-value for B73 x Mo17: '1.72e-10' χ2 p-value for Mo17 x B73: '1.59e-07' Biased in favor of strain: 'B73'
GRMZM2G063503	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.79 x 10^-16	375	66	364	49	85.03%	11.86%	441	413	RefGen V2	χ2 p-value for B73 x Mo17: '2.79e-16' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G063498	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	3.54 x 10^-6	43	0	2	411	100.00%	99.52%	43	413	RefGen V2	χ2 p-value for B73 x Mo17: '3.54e-06' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G063498	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	9.111 x 10^-4	11	0	0	21	100.00%	100.00%	11	21	RefGen V2	χ2 p-value for B73 x Mo17: '.0009111' χ2 p-value for Mo17 x B73: '4.59e-06' Biased in favor of strain: ''
GRMZM2G063492	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	82	1668	62	1740	4.69%	96.56%	1750	1802	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G063492	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	265	564	144	1023	31.97%	87.66%	829	1167	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G063478	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.172455 x 10^-1	47	21	19	42	69.12%	68.85%	68	61	RefGen V2	χ2 p-value for B73 x Mo17: '.6681352' χ2 p-value for Mo17 x B73: '.7172455' Biased in favor of strain: ''
GRMZM2G063478	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.707504 x 10^-1	53	59	61	41	47.32%	40.20%	112	102	RefGen V2	χ2 p-value for B73 x Mo17: '.5707504' χ2 p-value for Mo17 x B73: '.0476704' Biased in favor of strain: ''
GRMZM2G063473	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.464936 x 10^-1	92	84	92	103	52.27%	52.82%	176	195	RefGen V2	χ2 p-value for B73 x Mo17: '.5464936' χ2 p-value for Mo17 x B73: '.4308568' Biased in favor of strain: ''
GRMZM2G063473	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.304147 x 10^-1	111	73	87	148	60.33%	62.98%	184	235	RefGen V2	χ2 p-value for B73 x Mo17: '.0680657' χ2 p-value for Mo17 x B73: '.2304147' Biased in favor of strain: ''
GRMZM2G063468	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.060567 x 10^-1	21	6	14	33	77.78%	70.21%	27	47	RefGen V2	χ2 p-value for B73 x Mo17: '.2206791' χ2 p-value for Mo17 x B73: '.6060567' Biased in favor of strain: ''
GRMZM2G063468	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.112996 x 10^-1	37	27	41	18	57.81%	30.51%	64	59	RefGen V2	χ2 p-value for B73 x Mo17: '.2112996' χ2 p-value for Mo17 x B73: '.0027503' Biased in favor of strain: ''
GRMZM2G063462	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.70219 x 10^-2	148	192	179	237	43.53%	56.97%	340	416	RefGen V2	χ2 p-value for B73 x Mo17: '.0170219' χ2 p-value for Mo17 x B73: '.0044595' Biased in favor of strain: 'Mo17'
GRMZM2G063462	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.245057 x 10^-1	164	110	88	195	59.85%	68.90%	274	283	RefGen V2	χ2 p-value for B73 x Mo17: '.0167437' χ2 p-value for Mo17 x B73: '.4245057' Biased in favor of strain: ''
GRMZM2G063435	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G063435	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	4	0	4	0.00%	100.00%	4	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G063426	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.173 x 10^-4	81	138	53	152	36.99%	74.15%	219	205	RefGen V2	χ2 p-value for B73 x Mo17: '.0001173' χ2 p-value for Mo17 x B73: '4.70e-12' Biased in favor of strain: 'Mo17'
GRMZM2G063426	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G063394	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.857 x 10^-4	455	165	338	405	73.39%	54.51%	620	743	RefGen V2	χ2 p-value for B73 x Mo17: '.0003857' χ2 p-value for Mo17 x B73: '2.06e-12' Biased in favor of strain: 'B73'
GRMZM2G063394	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.93 x 10^-7	523	364	527	371	58.96%	41.31%	887	898	RefGen V2	χ2 p-value for B73 x Mo17: '9.36e-08' χ2 p-value for Mo17 x B73: '1.93e-07' Biased in favor of strain: 'B73'
GRMZM2G063387	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.319263 x 10^-1	246	143	145	162	63.24%	52.77%	389	307	RefGen V2	χ2 p-value for B73 x Mo17: '1.77e-07' χ2 p-value for Mo17 x B73: '.3319263' Biased in favor of strain: ''
GRMZM2G063387	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.71163 x 10^-2	341	143	208	273	70.45%	56.76%	484	481	RefGen V2	χ2 p-value for B73 x Mo17: '.0771163' χ2 p-value for Mo17 x B73: '4.02e-06' Biased in favor of strain: ''
GRMZM2G063369	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.87 x 10^-11	498	130	275	305	79.30%	52.59%	628	580	RefGen V2	χ2 p-value for B73 x Mo17: '1.87e-11' χ2 p-value for Mo17 x B73: '6.32e-13' Biased in favor of strain: 'B73'
GRMZM2G063369	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.6513 x 10^-3	356	243	273	215	59.43%	44.06%	599	488	RefGen V2	χ2 p-value for B73 x Mo17: '3.89e-06' χ2 p-value for Mo17 x B73: '.0086513' Biased in favor of strain: 'B73'
GRMZM2G063363	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	3	3	1	25.00%	25.00%	4	4	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G063363	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	0	0	75.00%		4	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G063342	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.65 x 10^-7	97	12	133	46	88.99%	25.70%	109	179	RefGen V2	χ2 p-value for B73 x Mo17: '7.65e-07' χ2 p-value for Mo17 x B73: '2.99e-31' Biased in favor of strain: 'B73'
GRMZM2G063342	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.14 x 10^-7	197	97	192	104	67.01%	35.14%	294	296	RefGen V2	χ2 p-value for B73 x Mo17: '5.47e-09' χ2 p-value for Mo17 x B73: '3.14e-07' Biased in favor of strain: 'B73'
GRMZM2G063340	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.45 x 10^-6	95	32	59	17	74.80%	22.37%	127	76	RefGen V2	χ2 p-value for B73 x Mo17: '2.27e-08' χ2 p-value for Mo17 x B73: '1.45e-06' Biased in favor of strain: 'B73'
GRMZM2G063340	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.539514 x 10^-1	40	19	25	25	67.80%	50.00%	59	50	RefGen V2	χ2 p-value for B73 x Mo17: '.8539514' χ2 p-value for Mo17 x B73: '.0124193' Biased in favor of strain: ''
GRMZM2G063328	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		10	3	1	7	76.92%	87.50%	13	8	RefGen V2	χ2 p-value for B73 x Mo17: '.4327761' χ2 p-value for Mo17 x B73: '.2112996' Biased in favor of strain: ''
GRMZM2G063328	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.71971 x 10^-2	146	119	113	86	55.09%	43.22%	265	199	RefGen V2	χ2 p-value for B73 x Mo17: '.0971971' χ2 p-value for Mo17 x B73: '.0556228' Biased in favor of strain: ''
GRMZM2G063298	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.511 x 10^-4	79	28	85	45	73.83%	34.62%	107	130	RefGen V2	χ2 p-value for B73 x Mo17: '8.21e-07' χ2 p-value for Mo17 x B73: '.0004511' Biased in favor of strain: 'B73'
GRMZM2G063298	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.716 x 10^-4	111	28	62	57	79.86%	47.90%	139	119	RefGen V2	χ2 p-value for B73 x Mo17: '.0009716' χ2 p-value for Mo17 x B73: '.0000141' Biased in favor of strain: 'B73'
GRMZM2G063291	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		17	0	7	1	100.00%	12.50%	17	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0035516' χ2 p-value for Mo17 x B73: '.001154' Biased in favor of strain: ''
GRMZM2G063291	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	0	10	0	100.00%	0.00%	8	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: ''
GRMZM2G063287	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	939	340	1179	432	73.42%	26.82%	1279	1611	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G063287	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.230743 x 10^-1	7	3	8	25	70.00%	75.76%	10	33	RefGen V2	χ2 p-value for B73 x Mo17: '.8230743' χ2 p-value for Mo17 x B73: '.2679382' Biased in favor of strain: ''
GRMZM2G063276	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	3	100.00%	100.00%	1	3	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G063276	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.630246 x 10^-1	6	5	11	0	54.55%	0.00%	11	11	RefGen V2	χ2 p-value for B73 x Mo17: '.7630246' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: ''
GRMZM2G063263	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.88 x 10^-4	142	68	110	64	67.62%	36.78%	210	174	RefGen V2	χ2 p-value for B73 x Mo17: '3.28e-07' χ2 p-value for Mo17 x B73: '.000488' Biased in favor of strain: 'B73'
GRMZM2G063263	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.15268 x 10^-1	146	69	78	151	67.91%	65.94%	215	229	RefGen V2	χ2 p-value for B73 x Mo17: '.6996995' χ2 p-value for Mo17 x B73: '.815268' Biased in favor of strain: ''
GRMZM2G063262	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.415663 x 10^-1	199	62	78	132	76.25%	62.86%	261	210	RefGen V2	χ2 p-value for B73 x Mo17: '.0010286' χ2 p-value for Mo17 x B73: '.2415663' Biased in favor of strain: ''
GRMZM2G063262	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.43 x 10^-10	215	101	196	79	68.04%	28.73%	316	275	RefGen V2	χ2 p-value for B73 x Mo17: '1.43e-10' χ2 p-value for Mo17 x B73: '1.72e-12' Biased in favor of strain: 'B73'
GRMZM2G063258	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.1042 x 10^-1	39	40	27	18	49.37%	40.00%	79	45	RefGen V2	χ2 p-value for B73 x Mo17: '.91042' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G063258	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.8603 x 10^-3	211	72	111	87	74.56%	43.94%	283	198	RefGen V2	χ2 p-value for B73 x Mo17: '.0048603' χ2 p-value for Mo17 x B73: '1.17e-11' Biased in favor of strain: 'B73'
GRMZM2G063253	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	4.572 x 10^-4	93	79	183	59	54.07%	24.38%	172	242	RefGen V2	χ2 p-value for B73 x Mo17: '.0004572' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G063253	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.9691 x 10^-3	430	331	383	302	56.50%	44.09%	761	685	RefGen V2	χ2 p-value for B73 x Mo17: '.0003323' χ2 p-value for Mo17 x B73: '.0019691' Biased in favor of strain: 'B73'
GRMZM2G063244	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.90165 x 10^-2	5	57	33	55	8.06%	62.50%	62	88	RefGen V2	χ2 p-value for B73 x Mo17: '4.00e-11' χ2 p-value for Mo17 x B73: '.0190165' Biased in favor of strain: 'Mo17'
GRMZM2G063244	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.28 x 10^-7	1	26	2	63	3.70%	96.92%	27	65	RefGen V2	χ2 p-value for B73 x Mo17: '3.91e-12' χ2 p-value for Mo17 x B73: '2.28e-07' Biased in favor of strain: 'Mo17'
GRMZM2G063223	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	4	100.00%	100.00%	3	4	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G063223	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	5	1	5	0.00%	83.33%	5	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: ''
GRMZM2G063220	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.0171 x 10^-3	1094	886	1331	1193	55.25%	47.27%	1980	2524	RefGen V2	χ2 p-value for B73 x Mo17: '2.95e-06' χ2 p-value for Mo17 x B73: '.0060171' Biased in favor of strain: 'B73'
GRMZM2G063220	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1797	108	679	284	94.33%	29.49%	1905	963	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G063192	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G063192	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.89475 x 10^-2	19	6	14	5	76.00%	26.32%	25	19	RefGen V2	χ2 p-value for B73 x Mo17: '.0093224' χ2 p-value for Mo17 x B73: '.0389475' Biased in favor of strain: 'B73'
GRMZM2G063188	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.493965 x 10^-1	90	103	102	129	46.63%	55.84%	193	231	RefGen V2	χ2 p-value for B73 x Mo17: '.3493965' χ2 p-value for Mo17 x B73: '.0756555' Biased in favor of strain: ''
GRMZM2G063188	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	9.2827 x 10^-3	29	36	34	37	44.62%	52.11%	65	71	RefGen V2	χ2 p-value for B73 x Mo17: '.0001623' χ2 p-value for Mo17 x B73: '.0092827' Biased in favor of strain: ''
GRMZM2G063163	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.73 x 10^-15	509	117	344	121	81.31%	26.02%	626	465	RefGen V2	χ2 p-value for B73 x Mo17: '7.73e-15' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G063163	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1069	390	970	425	73.27%	30.47%	1459	1395	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G063156	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.862137 x 10^-1	32	42	25	29	43.24%	53.70%	74	54	RefGen V2	χ2 p-value for B73 x Mo17: '.245042' χ2 p-value for Mo17 x B73: '.5862137' Biased in favor of strain: ''
GRMZM2G063156	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.17563 x 10^-2	99	31	98	41	76.15%	29.50%	130	139	RefGen V2	χ2 p-value for B73 x Mo17: '.0217563' χ2 p-value for Mo17 x B73: '1.45e-20' Biased in favor of strain: ''
GRMZM2G063151	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	596	1142	339	2114	34.29%	86.18%	1738	2453	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G063151	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.96 x 10^-11	319	508	236	477	38.57%	66.90%	827	713	RefGen V2	χ2 p-value for B73 x Mo17: '4.96e-11' χ2 p-value for Mo17 x B73: '1.79e-19' Biased in favor of strain: 'Mo17'
GRMZM2G063144	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G063144	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	2	0	100.00%	0.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G063133	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.120899 x 10^-1	27	13	19	16	67.50%	45.71%	40	35	RefGen V2	χ2 p-value for B73 x Mo17: '.0268567' χ2 p-value for Mo17 x B73: '.6120899' Biased in favor of strain: ''
GRMZM2G063133	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	1	4	75.00%	80.00%	4	5	RefGen V2	χ2 p-value for B73 x Mo17: '.7236798' χ2 p-value for Mo17 x B73: '.5270893' Biased in favor of strain: ''
GRMZM2G063069	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.921286 x 10^-1	1175	554	692	1453	67.96%	67.74%	1729	2145	RefGen V2	χ2 p-value for B73 x Mo17: '.2546321' χ2 p-value for Mo17 x B73: '.2921286' Biased in favor of strain: ''
GRMZM2G063069	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.7021 x 10^-3	319	221	252	318	59.07%	55.79%	540	570	RefGen V2	χ2 p-value for B73 x Mo17: '.0000247' χ2 p-value for Mo17 x B73: '.0057021' Biased in favor of strain: ''
GRMZM2G063060	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.94 x 10^-6	362	198	329	225	64.64%	40.61%	560	554	RefGen V2	χ2 p-value for B73 x Mo17: '4.20e-12' χ2 p-value for Mo17 x B73: '9.94e-06' Biased in favor of strain: 'B73'
GRMZM2G063060	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1909 x 10^-3	489	185	309	439	72.55%	58.69%	674	748	RefGen V2	χ2 p-value for B73 x Mo17: '.0011909' χ2 p-value for Mo17 x B73: '3.69e-06' Biased in favor of strain: 'B73'
GRMZM2G063048	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.433966 x 10^-1	27	15	21	38	64.29%	64.41%	42	59	RefGen V2	χ2 p-value for B73 x Mo17: '.7433966' χ2 p-value for Mo17 x B73: '.7127016' Biased in favor of strain: ''
GRMZM2G063048	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.84597 x 10^-2	72	48	82	55	60.00%	40.15%	120	137	RefGen V2	χ2 p-value for B73 x Mo17: '.0284597' χ2 p-value for Mo17 x B73: '.0210679' Biased in favor of strain: 'B73'
GRMZM2G063042	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.500973 x 10^-1	133	80	245	238	62.44%	49.28%	213	483	RefGen V2	χ2 p-value for B73 x Mo17: '.0002818' χ2 p-value for Mo17 x B73: '.7500973' Biased in favor of strain: ''
GRMZM2G063042	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.74278 x 10^-2	67	18	310	254	78.82%	45.04%	85	564	RefGen V2	χ2 p-value for B73 x Mo17: '.0174278' χ2 p-value for Mo17 x B73: '1.18e-27' Biased in favor of strain: ''
GRMZM2G063025	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	605	84	307	174	87.81%	36.17%	689	481	RefGen V2	χ2 p-value for B73 x Mo17: '5.44e-32' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G063025	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.15 x 10^-11	535	247	382	218	68.41%	36.33%	782	600	RefGen V2	χ2 p-value for B73 x Mo17: '7.13e-25' χ2 p-value for Mo17 x B73: '2.15e-11' Biased in favor of strain: 'B73'
GRMZM2G063024	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	2	5	9	60.00%	64.29%	5	14	RefGen V2	χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.2850494' Biased in favor of strain: ''
GRMZM2G063024	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	2	0.00%	100.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G062953	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.72443 x 10^-2	67	58	44	120	53.60%	73.17%	125	164	RefGen V2	χ2 p-value for B73 x Mo17: '.0019411' χ2 p-value for Mo17 x B73: '.0772443' Biased in favor of strain: ''
GRMZM2G062953	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.767752 x 10^-1	232	203	153	158	53.33%	50.80%	435	311	RefGen V2	χ2 p-value for B73 x Mo17: '.1643942' χ2 p-value for Mo17 x B73: '.7767752' Biased in favor of strain: ''
GRMZM2G062914	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.07 x 10^-16	102	14	96	10	87.93%	9.43%	116	106	RefGen V2	χ2 p-value for B73 x Mo17: '3.07e-16' χ2 p-value for Mo17 x B73: '6.65e-17' Biased in favor of strain: 'B73'
GRMZM2G062914	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.5263 x 10^-3	36	2	16	12	94.74%	42.86%	38	28	RefGen V2	χ2 p-value for B73 x Mo17: '.0002419' χ2 p-value for Mo17 x B73: '.0075263' Biased in favor of strain: 'B73'
GRMZM2G062911	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	15	0.00%	100.00%	3	15	RefGen V2	χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.0061699' Biased in favor of strain: ''
GRMZM2G062911	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.63 x 10^-7	0	32	0	24	0.00%	100.00%	32	24	RefGen V2	χ2 p-value for B73 x Mo17: '1.54e-08' χ2 p-value for Mo17 x B73: '9.63e-07' Biased in favor of strain: 'Mo17'
GRMZM2G062910	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	4	2	100.00%	33.33%	2	6	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: ''
GRMZM2G062910	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	3	5	80.00%	62.50%	5	8	RefGen V2	χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.8025872' Biased in favor of strain: ''
GRMZM2G062885	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G062885	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.815113 x 10^-1	4	6	7	6	40.00%	46.15%	10	13	RefGen V2	χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.7815113' Biased in favor of strain: ''
GRMZM2G062848	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.547208 x 10^-1	11	9	18	2	55.00%	10.00%	20	20	RefGen V2	χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.0003466' Biased in favor of strain: ''
GRMZM2G062848	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.154 x 10^-2	10	20	19	20	33.33%	51.28%	30	39	RefGen V2	χ2 p-value for B73 x Mo17: '.0001075' χ2 p-value for Mo17 x B73: '.04154' Biased in favor of strain: ''
GRMZM2G062844	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G062844	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.247 x 10^-4	40	77	32	66	34.19%	67.35%	117	98	RefGen V2	χ2 p-value for B73 x Mo17: '.0006247' χ2 p-value for Mo17 x B73: '.0005936' Biased in favor of strain: 'Mo17'
GRMZM2G062841	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.744241 x 10^-1	258	172	225	234	60.00%	50.98%	430	459	RefGen V2	χ2 p-value for B73 x Mo17: '.0000336' χ2 p-value for Mo17 x B73: '.6744241' Biased in favor of strain: ''
GRMZM2G062841	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	8.299 x 10^-4	312	210	185	261	59.77%	58.52%	522	446	RefGen V2	χ2 p-value for B73 x Mo17: '.0008299' χ2 p-value for Mo17 x B73: '.0002627' Biased in favor of strain: ''
GRMZM2G062761	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5275 x 10^-3	27	2	37	19	93.10%	33.93%	29	56	RefGen V2	χ2 p-value for B73 x Mo17: '.0025275' χ2 p-value for Mo17 x B73: '2.03e-07' Biased in favor of strain: 'B73'
GRMZM2G062761	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.27 x 10^-16	388	140	376	183	73.48%	32.74%	528	559	RefGen V2	χ2 p-value for B73 x Mo17: '3.72e-27' χ2 p-value for Mo17 x B73: '3.27e-16' Biased in favor of strain: 'B73'

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