| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G064818 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G064818 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.11 x 10-5 | 344 | 238 | 436 | 235 | 59.11% | 35.02% | 582 | 671 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000111' χ2 p-value for Mo17 x B73: '8.53e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G064804 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.96 x 10-18 | 770 | 337 | 602 | 334 | 69.56% | 35.68% | 1107 | 936 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.02e-38' χ2 p-value for Mo17 x B73: '1.96e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G064804 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3987 x 10-3 | 494 | 188 | 381 | 345 | 72.43% | 47.52% | 682 | 726 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0013987' χ2 p-value for Mo17 x B73: '7.15e-28' Biased in favor of strain: 'B73' |
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| GRMZM2G064799 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.136874 x 10-1 | 343 | 241 | 297 | 622 | 58.73% | 67.68% | 584 | 919 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000476' χ2 p-value for Mo17 x B73: '.5136874' Biased in favor of strain: '' |
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| GRMZM2G064799 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.58128 x 10-2 | 440 | 358 | 350 | 306 | 55.14% | 46.65% | 798 | 656 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0036988' χ2 p-value for Mo17 x B73: '.0858128' Biased in favor of strain: '' |
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| GRMZM2G064775 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.142162 x 10-1 | 14 | 10 | 4 | 8 | 58.33% | 66.67% | 24 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.2482131' Biased in favor of strain: '' |
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| GRMZM2G064775 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.94601 x 10-2 | 214 | 130 | 51 | 64 | 62.21% | 55.65% | 344 | 115 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0794601' χ2 p-value for Mo17 x B73: '.0122228' Biased in favor of strain: '' |
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| GRMZM2G064767 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.876116 x 10-1 | 97 | 73 | 58 | 137 | 57.06% | 70.26% | 170 | 195 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.007873' χ2 p-value for Mo17 x B73: '.2876116' Biased in favor of strain: '' |
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| GRMZM2G064767 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.426166 x 10-1 | 96 | 97 | 63 | 88 | 49.74% | 58.28% | 193 | 151 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9426166' χ2 p-value for Mo17 x B73: '.0419041' Biased in favor of strain: '' |
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| GRMZM2G064759 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.997413 x 10-1 | 30 | 25 | 32 | 31 | 54.55% | 49.21% | 55 | 63 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5001842' χ2 p-value for Mo17 x B73: '.8997413' Biased in favor of strain: '' |
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| GRMZM2G064759 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 4 | 4 | 75.00% | 50.00% | 4 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7236798' χ2 p-value for Mo17 x B73: '.3173104' Biased in favor of strain: '' |
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| GRMZM2G064753 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.9 x 10-5 | 72 | 10 | 74 | 36 | 87.80% | 32.73% | 82 | 110 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000049' χ2 p-value for Mo17 x B73: '4.32e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G064753 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.84 x 10-7 | 81 | 28 | 73 | 23 | 74.31% | 23.96% | 109 | 96 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.84e-07' χ2 p-value for Mo17 x B73: '3.34e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G064750 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 2 | 16 | 0 | 77.78% | 0.00% | 9 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0955807' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: '' |
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| GRMZM2G064750 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 5 | 5 | 100.00% | 50.00% | 2 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.2635524' Biased in favor of strain: '' |
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| GRMZM2G064744 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 2 | 1 | 60.00% | 33.33% | 5 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7518208' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: '' |
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| GRMZM2G064744 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 0 | 100.00% | 0.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G064732 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.56 x 10-13 | 552 | 279 | 436 | 248 | 66.43% | 36.26% | 831 | 684 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.79e-21' χ2 p-value for Mo17 x B73: '6.56e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G064732 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.54 x 10-22 | 863 | 208 | 522 | 475 | 80.58% | 47.64% | 1071 | 997 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.54e-22' χ2 p-value for Mo17 x B73: '3.44e-37' Biased in favor of strain: 'B73' |
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| GRMZM2G064710 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 4 | 0 | 100.00% | 0.00% | 8 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G064710 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.15 x 10-17 | 91 | 7 | 131 | 1 | 92.86% | 0.76% | 98 | 132 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.15e-17' χ2 p-value for Mo17 x B73: '1.11e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G064708 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.21 x 10-7 | 29 | 0 | 28 | 0 | 100.00% | 0.00% | 29 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.24e-08' χ2 p-value for Mo17 x B73: '1.21e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G064708 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 15 | 0 | 2 | 0 | 100.00% | 0.00% | 15 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0061701' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G064695 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 0 | 2 | 100.00% | 100.00% | 5 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G064695 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 3 | 0 | 2 | 50.00% | 100.00% | 6 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G064679 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G064679 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G064663 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G064663 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 5 | 3 | 0 | 28.57% | 0.00% | 7 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2568392' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G064655 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.487 x 10-3 | 52 | 135 | 44 | 76 | 27.81% | 63.33% | 187 | 120 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.28e-09' χ2 p-value for Mo17 x B73: '.003487' Biased in favor of strain: 'Mo17' |
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| GRMZM2G064655 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G064640 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 11 | 0 | 6 | 0.00% | 100.00% | 11 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.73e-06' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G064640 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.2819 x 10-3 | 0 | 38 | 1 | 12 | 0.00% | 92.31% | 38 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.07e-10' χ2 p-value for Mo17 x B73: '.0022819' Biased in favor of strain: 'Mo17' |
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| GRMZM2G064638 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.373519 x 10-1 | 10 | 8 | 13 | 4 | 55.56% | 23.53% | 18 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6373519' χ2 p-value for Mo17 x B73: '.029049' Biased in favor of strain: '' |
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| GRMZM2G064638 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G064628 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G064628 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.774686 x 10-1 | 13 | 16 | 13 | 21 | 44.83% | 61.76% | 29 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5774686' χ2 p-value for Mo17 x B73: '.170067' Biased in favor of strain: '' |
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| GRMZM2G064612 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.04 x 10-10 | 685 | 469 | 874 | 471 | 59.36% | 35.02% | 1154 | 1345 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.04e-10' χ2 p-value for Mo17 x B73: '4.33e-28' Biased in favor of strain: 'B73' |
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| GRMZM2G064612 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.77 x 10-14 | 752 | 210 | 474 | 459 | 78.17% | 49.20% | 962 | 933 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.77e-14' χ2 p-value for Mo17 x B73: '1.04e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G064608 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.20702 x 10-2 | 407 | 169 | 238 | 307 | 70.66% | 56.33% | 576 | 545 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0420702' χ2 p-value for Mo17 x B73: '3.07e-07' Biased in favor of strain: '' |
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| GRMZM2G064608 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.143759 x 10-1 | 305 | 170 | 174 | 172 | 64.21% | 49.71% | 475 | 346 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.86e-10' χ2 p-value for Mo17 x B73: '.9143759' Biased in favor of strain: '' |
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| GRMZM2G064605 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.26 x 10-19 | 105 | 2 | 81 | 0 | 98.13% | 0.00% | 107 | 81 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.34e-23' χ2 p-value for Mo17 x B73: '2.26e-19' Biased in favor of strain: 'B73' |
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| GRMZM2G064605 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 387 | 0 | 151 | 0 | 100.00% | 0.00% | 387 | 151 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G064603 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.49551 x 10-2 | 31 | 3 | 2 | 17 | 91.18% | 89.47% | 34 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.002432' χ2 p-value for Mo17 x B73: '.0349551' Biased in favor of strain: '' |
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| GRMZM2G064603 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.7451 x 10-3 | 3 | 17 | 1 | 18 | 15.00% | 94.74% | 20 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0017451' χ2 p-value for Mo17 x B73: '.0000962' Biased in favor of strain: 'Mo17' |
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| GRMZM2G064601 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.77 x 10-11 | 68 | 9 | 85 | 8 | 88.31% | 8.60% | 77 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.77e-11' χ2 p-value for Mo17 x B73: '1.41e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G064601 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.22058 x 10-2 | 22 | 4 | 14 | 3 | 84.62% | 17.65% | 26 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0522058' χ2 p-value for Mo17 x B73: '.0000181' Biased in favor of strain: '' |
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| GRMZM2G064594 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 1 | 0 | 100.00% | 0.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G064594 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.05871 x 10-2 | 16 | 2 | 22 | 8 | 88.89% | 26.67% | 18 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009674' χ2 p-value for Mo17 x B73: '.0105871' Biased in favor of strain: 'B73' |
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| GRMZM2G064584 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.53473 x 10-2 | 15 | 30 | 11 | 41 | 33.33% | 78.85% | 45 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0000318' Biased in favor of strain: 'Mo17' |
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| GRMZM2G064584 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.439 x 10-4 | 7 | 35 | 2 | 38 | 16.67% | 95.00% | 42 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.25e-12' χ2 p-value for Mo17 x B73: '.0001439' Biased in favor of strain: 'Mo17' |
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| GRMZM2G064580 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G064580 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 4 | 1 | 5 | 69.23% | 83.33% | 13 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1655179' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: '' |
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| GRMZM2G064563 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.701581 x 10-1 | 358 | 328 | 389 | 405 | 52.19% | 51.01% | 686 | 794 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2520413' χ2 p-value for Mo17 x B73: '.5701581' Biased in favor of strain: '' |
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| GRMZM2G064563 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.53 x 10-20 | 339 | 43 | 176 | 105 | 88.74% | 37.37% | 382 | 281 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.53e-20' χ2 p-value for Mo17 x B73: '2.03e-25' Biased in favor of strain: 'B73' |
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| GRMZM2G064562 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 4 | 100.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G064562 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 20 | 6 | 4 | 2 | 76.92% | 33.33% | 26 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0060396' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM2G064558 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.97 x 10-11 | 1 | 49 | 0 | 45 | 2.00% | 100.00% | 50 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.14e-11' χ2 p-value for Mo17 x B73: '1.97e-11' Biased in favor of strain: 'Mo17' |
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| GRMZM2G064558 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.59 x 10-8 | 0 | 41 | 0 | 59 | 0.00% | 100.00% | 41 | 59 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.36e-19' χ2 p-value for Mo17 x B73: '5.59e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM2G064547 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.24864 x 10-2 | 96 | 34 | 29 | 36 | 73.85% | 55.38% | 130 | 65 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0824864' χ2 p-value for Mo17 x B73: '.0536653' Biased in favor of strain: '' |
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| GRMZM2G064547 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.4155 x 10-3 | 66 | 39 | 97 | 57 | 62.86% | 37.01% | 105 | 154 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0084155' χ2 p-value for Mo17 x B73: '.0012673' Biased in favor of strain: 'B73' |
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| GRMZM2G064541 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.080725 x 10-1 | 54 | 57 | 38 | 37 | 48.65% | 49.33% | 111 | 75 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7758377' χ2 p-value for Mo17 x B73: '.9080725' Biased in favor of strain: '' |
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| GRMZM2G064541 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.49314 x 10-2 | 124 | 87 | 87 | 286 | 58.77% | 76.68% | 211 | 373 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0149314' χ2 p-value for Mo17 x B73: '.0000412' Biased in favor of strain: '' |
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| GRMZM2G064521 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G064521 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 18 | 0 | 3 | 5.26% | 100.00% | 19 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000962' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G064518 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.668543 x 10-1 | 7 | 10 | 3 | 11 | 41.18% | 78.57% | 17 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4668543' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: '' |
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| GRMZM2G064518 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.680827 x 10-1 | 5 | 6 | 7 | 16 | 45.45% | 69.57% | 11 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1355876' χ2 p-value for Mo17 x B73: '.7680827' Biased in favor of strain: '' |
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| GRMZM2G064503 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.501642 x 10-1 | 75 | 24 | 43 | 85 | 75.76% | 66.41% | 99 | 128 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.055014' χ2 p-value for Mo17 x B73: '.9501642' Biased in favor of strain: '' |
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| GRMZM2G064503 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.6668 x 10-3 | 128 | 75 | 81 | 48 | 63.05% | 37.21% | 203 | 129 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001993' χ2 p-value for Mo17 x B73: '.0036668' Biased in favor of strain: 'B73' |
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| GRMZM2G064501 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.32 x 10-8 | 177 | 85 | 178 | 81 | 67.56% | 31.27% | 262 | 259 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.32e-08' χ2 p-value for Mo17 x B73: '1.67e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G064501 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.752 x 10-2 | 171 | 63 | 68 | 85 | 73.08% | 55.56% | 234 | 153 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.03752' χ2 p-value for Mo17 x B73: '.0035515' Biased in favor of strain: '' |
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| GRMZM2G064473 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.13 x 10-13 | 645 | 177 | 438 | 393 | 78.47% | 47.29% | 822 | 831 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.13e-13' χ2 p-value for Mo17 x B73: '2.21e-32' Biased in favor of strain: 'B73' |
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| GRMZM2G064473 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.02 x 10-9 | 661 | 349 | 617 | 428 | 65.45% | 40.96% | 1010 | 1045 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.48e-23' χ2 p-value for Mo17 x B73: '5.02e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G064467 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.014538 x 10-1 | 34 | 21 | 38 | 25 | 61.82% | 39.68% | 55 | 63 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0796158' χ2 p-value for Mo17 x B73: '.1014538' Biased in favor of strain: '' |
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| GRMZM2G064467 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.728581 x 10-1 | 22 | 15 | 14 | 37 | 59.46% | 72.55% | 37 | 51 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3523643' χ2 p-value for Mo17 x B73: '.3728581' Biased in favor of strain: '' |
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| GRMZM2G064437 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G064437 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 3 | 3 | 4 | 40.00% | 57.14% | 5 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: '' |
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| GRMZM2G064390 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.09 x 10-10 | 97 | 25 | 85 | 21 | 79.51% | 19.81% | 122 | 106 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.10e-11' χ2 p-value for Mo17 x B73: '5.09e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G064390 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.37674 x 10-2 | 73 | 21 | 48 | 43 | 77.66% | 47.25% | 94 | 91 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0237674' χ2 p-value for Mo17 x B73: '.0000854' Biased in favor of strain: '' |
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| GRMZM2G064382 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 606 | 41 | 218 | 47 | 93.66% | 17.74% | 647 | 265 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G064382 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.93 x 10-9 | 116 | 42 | 93 | 27 | 73.42% | 22.50% | 158 | 120 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.93e-09' χ2 p-value for Mo17 x B73: '1.69e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G064371 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 2 | 3 | 1 | 75.00% | 25.00% | 8 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G064371 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 8 | 0 | 100.00% | 0.00% | 6 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: '' |
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| GRMZM2G064366 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.927773 x 10-1 | 74 | 36 | 61 | 79 | 67.27% | 56.43% | 110 | 140 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8927773' χ2 p-value for Mo17 x B73: '.0101774' Biased in favor of strain: '' |
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| GRMZM2G064366 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.724976 x 10-1 | 81 | 64 | 66 | 58 | 55.86% | 46.77% | 145 | 124 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1580168' χ2 p-value for Mo17 x B73: '.4724976' Biased in favor of strain: '' |
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| GRMZM2G064330 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.373519 x 10-1 | 10 | 8 | 5 | 7 | 55.56% | 58.33% | 18 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6373519' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G064330 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.236735 x 10-1 | 8 | 10 | 6 | 10 | 44.44% | 62.50% | 18 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454974' χ2 p-value for Mo17 x B73: '.7236735' Biased in favor of strain: '' |
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| GRMZM2G064328 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.31766 x 10-2 | 137 | 49 | 71 | 104 | 73.66% | 59.43% | 186 | 175 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0431766' χ2 p-value for Mo17 x B73: '.0422361' Biased in favor of strain: '' |
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| GRMZM2G064328 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.244859 x 10-1 | 116 | 102 | 83 | 75 | 53.21% | 47.47% | 218 | 158 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3430278' χ2 p-value for Mo17 x B73: '.5244859' Biased in favor of strain: '' |
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| GRMZM2G064320 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 1 | 7 | 0 | 90.00% | 0.00% | 10 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.011412' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: '' |
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| GRMZM2G064320 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G064311 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 37 | 0 | 0 | 0 | 100.00% | 37 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G064311 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G064302 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 41815 | 15473 | 42485 | 16831 | 72.99% | 28.38% | 57288 | 59316 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G064302 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 84468 | 13153 | 73159 | 43293 | 86.53% | 37.18% | 97621 | 116452 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G064268 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.904 x 10-4 | 103 | 22 | 47 | 38 | 82.40% | 44.71% | 125 | 85 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001904' χ2 p-value for Mo17 x B73: '.0000175' Biased in favor of strain: 'B73' |
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| GRMZM2G064268 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.151 x 10-3 | 129 | 70 | 105 | 70 | 64.82% | 40.00% | 199 | 175 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000288' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: 'B73' |
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| GRMZM2G064255 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.91 x 10-5 | 322 | 440 | 314 | 474 | 42.26% | 60.15% | 762 | 788 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000191' χ2 p-value for Mo17 x B73: '1.20e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM2G064255 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.49694 x 10-2 | 374 | 249 | 233 | 555 | 60.03% | 70.43% | 623 | 788 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004431' χ2 p-value for Mo17 x B73: '.0249694' Biased in favor of strain: '' |