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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G21482 CKX7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 1 1 100.00% 50.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.472548'
Avg. expression score for this sample: '3.49186'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G21482 CKX7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.78895 x 10-1 3 7 0 0 30.00% 10 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.472548'
Avg. expression score for this sample: '4.22735'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G21482 CKX7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '6.8024'
Avg. embryo expression (LCM): '9.53196'
AT5G21482 CKX7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21482 CKX7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21482 CKX7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21430 NdhU endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.54933'
Avg. expression score in LCM sample: '1.55798'
Tissue used: 'pure endosperm, no chalazal'
AT5G21430 NdhU endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.917367'
Avg. expression score in LCM sample: '1.55798'
Tissue used: 'full endosperm'
AT5G21430 NdhU embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '16.8187'
Avg. embryo expression (LCM): '17.356'
AT5G21430 NdhU endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21430 NdhU endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21430 NdhU endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21378 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G21378 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G21378 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G21378 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21378 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21378 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21326 CIPK26 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '109.54'
Avg. expression score in LCM sample: '122.14'
Tissue used: 'pure endosperm, no chalazal'
AT5G21326 CIPK26 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '116.781'
Avg. expression score in LCM sample: '122.14'
Tissue used: 'full endosperm'
AT5G21326 CIPK26 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '62.7311'
Avg. embryo expression (LCM): '75.9668'
AT5G21326 CIPK26 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21326 CIPK26 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21326 CIPK26 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '47.2544'
Avg. expression score in LCM sample: '11.3027'
Tissue used: 'pure endosperm, no chalazal'
AT5G21280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '48.6096'
Avg. expression score in LCM sample: '11.3027'
Tissue used: 'full endosperm'
AT5G21280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '18.1815'
Avg. embryo expression (LCM): '8.57751'
AT5G21280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21274 CAM6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.72455 x 10-1 5 14 2 16 26.32% 88.89% 19 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.765607'
Avg. expression score for this sample: '573.868'
Avg. expression score in LCM sample: '316.476'
Tissue used: 'pure endosperm, no chalazal'
AT5G21274 CAM6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 16 6 14 26 72.73% 65.00% 22 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.765607'
Avg. expression score for this sample: '865.743'
Avg. expression score in LCM sample: '316.476'
Tissue used: 'full endosperm'
AT5G21274 CAM6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 9 8 1 1 52.94% 50.00% 17 2 TAIR8 Avg. embryo expression (dissected): '466.427'
Avg. embryo expression (LCM): '610.51'
AT5G21274 CAM6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.2578 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21274 CAM6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8705 x 10-1 84 32 72.41% 116 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21274 CAM6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.736 x 10-3 46 9 83.64% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21222 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.65188 x 10-1 56 48 27 70 53.85% 72.16% 104 97 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.622384'
Avg. expression score for this sample: '107.525'
Avg. expression score in LCM sample: '38.729'
Tissue used: 'pure endosperm, no chalazal'
AT5G21222 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.74182 x 10-1 165 85 83 225 66.00% 73.05% 250 308 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.622384'
Avg. expression score for this sample: '145.743'
Avg. expression score in LCM sample: '38.729'
Tissue used: 'full endosperm'
AT5G21222 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.72791 x 10-1 119 120 33 39 49.79% 54.17% 239 72 TAIR8 Avg. embryo expression (dissected): '287.003'
Avg. embryo expression (LCM): '178.03'
AT5G21222 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.9675 x 10-2 28 6 82.35% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21222 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.296 x 10-3 24 2 92.31% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21222 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.71116 x 10-1 29 19 60.42% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21170 AKINBETA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 18 8 11 19 69.23% 63.33% 26 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.250545'
Avg. expression score for this sample: '300.98'
Avg. expression score in LCM sample: '172.509'
Tissue used: 'pure endosperm, no chalazal'
AT5G21170 AKINBETA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.43587 x 10-1 52 14 27 67 78.79% 71.28% 66 94 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.250545'
Avg. expression score for this sample: '175.231'
Avg. expression score in LCM sample: '172.509'
Tissue used: 'full endosperm'
AT5G21170 AKINBETA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.7438 x 10-2 29 12 5 8 70.73% 61.54% 41 13 TAIR8 Avg. embryo expression (dissected): '342.979'
Avg. embryo expression (LCM): '122.496'
AT5G21170 AKINBETA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 10 3 76.92% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21170 AKINBETA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9424 x 10-1 38 8 82.61% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21170 AKINBETA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.8351 x 10-2 49 8 85.96% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21160 LARP1a endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.7515 x 10-1 223 128 108 326 63.53% 75.12% 351 434 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.182286'
Avg. expression score for this sample: '307.383'
Avg. expression score in LCM sample: '179.079'
Tissue used: 'pure endosperm, no chalazal'
AT5G21160 LARP1a endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.11921 x 10-1 268 143 140 332 65.21% 70.34% 411 472 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.182286'
Avg. expression score for this sample: '383.371'
Avg. expression score in LCM sample: '179.079'
Tissue used: 'full endosperm'
AT5G21160 LARP1a embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.17076 x 10-1 238 310 113 122 43.43% 51.91% 548 235 TAIR8 Avg. embryo expression (dissected): '459.017'
Avg. embryo expression (LCM): '444.184'
AT5G21160 LARP1a endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.953 x 10-2 79 24 76.70% 103 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21160 LARP1a endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.2 x 10-7 547 147 78.82% 694 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21160 LARP1a endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.5 x 10-13 575 118 82.97% 693 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21150 AGO9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 3.2784 x 10-1 21 9 0 12 70.00% 100.00% 30 12 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '.000025'
Avg. expression score for this sample: '19.8074'
Avg. expression score in LCM sample: '20.1214'
Tissue used: 'pure endosperm, no chalazal'
AT5G21150 AGO9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 2.7 x 10-5 53 9 6 64 85.48% 91.43% 62 70 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '.000025'
Avg. expression score for this sample: '37.2249'
Avg. expression score in LCM sample: '20.1214'
Tissue used: 'full endosperm'
AT5G21150 AGO9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.22393 x 10-1 10 5 1 0 66.67% 0.00% 15 1 TAIR8 Avg. embryo expression (dissected): '14.4411'
Avg. embryo expression (LCM): '23.4845'
AT5G21150 AGO9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.2384 x 10-1 15 0 100.00% 15 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G21150 AGO9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5531 x 10-2 212 59 78.23% 271 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G21150 AGO9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.051 x 10-3 449 31 93.54% 480 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G21140 emb1379 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.68525'
Avg. expression score in LCM sample: '3.26294'
Tissue used: 'pure endosperm, no chalazal'
AT5G21140 emb1379 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 1 2 0 83.33% 0.00% 6 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '10.5832'
Avg. expression score in LCM sample: '3.26294'
Tissue used: 'full endosperm'
AT5G21140 emb1379 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '4.87648'
Avg. embryo expression (LCM): '27.8926'
AT5G21140 emb1379 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21140 emb1379 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.69231 x 10-1 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21140 emb1379 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.45455 x 10-1 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.259467'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G21130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.180207'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G21130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G21130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 25 30 45.45% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 32 16 66.67% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21125 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.685539'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G21125 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.476126'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G21125 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G21125 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21125 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21125 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21120 EIL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.148992'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G21120 EIL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.525648'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G21120 EIL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.506082'
Avg. embryo expression (LCM): '0'
AT5G21120 EIL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21120 EIL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21120 EIL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 36 18 66.67% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G21110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G21110 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G21110 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21110 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21110 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21105 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 21 18 5 26 53.85% 83.87% 39 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.3e-07'
Avg. expression score for this sample: '361.834'
Avg. expression score in LCM sample: '64.9648'
Tissue used: 'pure endosperm, no chalazal'
AT5G21105 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.5 x 10-9 69 33 27 258 67.65% 90.53% 102 285 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.3e-07'
Avg. expression score for this sample: '822.207'
Avg. expression score in LCM sample: '64.9648'
Tissue used: 'full endosperm'
AT5G21105 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.86727 x 10-1 13 33 1 14 28.26% 93.33% 46 15 TAIR8 Avg. embryo expression (dissected): '372.996'
Avg. embryo expression (LCM): '273.488'
AT5G21105 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 40 9 81.63% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21105 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.1 x 10-9 251 10 96.17% 261 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21105 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-9 329 16 95.36% 345 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.31989 x 10-1 7 0 2 10 100.00% 83.33% 7 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.07137'
Avg. expression score for this sample: '24.32'
Avg. expression score in LCM sample: '10.7295'
Tissue used: 'pure endosperm, no chalazal'
AT5G21100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.14098 x 10-1 10 0 4 9 100.00% 69.23% 10 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.07137'
Avg. expression score for this sample: '29.6861'
Avg. expression score in LCM sample: '10.7295'
Tissue used: 'full endosperm'
AT5G21100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 3 8 1 72.73% 11.11% 11 9 TAIR8 Avg. embryo expression (dissected): '64.9804'
Avg. embryo expression (LCM): '22.6054'
AT5G21100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'