GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G066234	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.896 x 10^-4	61	27	58	20	69.32%	25.64%	88	78	RefGen V2	χ2 p-value for B73 x Mo17: '.0002896' χ2 p-value for Mo17 x B73: '.0000169' Biased in favor of strain: 'B73'
GRMZM2G066234	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	5	15	20	44.44%	57.14%	9	35	RefGen V2	χ2 p-value for B73 x Mo17: '.1572937' χ2 p-value for Mo17 x B73: '.2319976' Biased in favor of strain: ''
GRMZM2G066225	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1342	115	647	254	92.11%	28.19%	1457	901	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G066225	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	668	124	547	93	84.34%	14.53%	792	640	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G066222	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.5699 x 10^-3	38	68	30	60	35.85%	66.67%	106	90	RefGen V2	χ2 p-value for B73 x Mo17: '.0035699' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: 'Mo17'
GRMZM2G066222	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.38073 x 10^-1	104	59	53	183	63.80%	77.54%	163	236	RefGen V2	χ2 p-value for B73 x Mo17: '.438073' χ2 p-value for Mo17 x B73: '.0003938' Biased in favor of strain: ''
GRMZM2G066219	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.81 x 10^-8	69	0	21	3	100.00%	12.50%	69	24	RefGen V2	χ2 p-value for B73 x Mo17: '4.26e-09' χ2 p-value for Mo17 x B73: '1.81e-08' Biased in favor of strain: 'B73'
GRMZM2G066219	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.74254 x 10^-2	34	8	28	15	80.95%	34.88%	42	43	RefGen V2	χ2 p-value for B73 x Mo17: '.0000602' χ2 p-value for Mo17 x B73: '.0474254' Biased in favor of strain: 'B73'
GRMZM2G066202	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	0	6	11	100.00%	64.71%	7	17	RefGen V2	χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.2252529' Biased in favor of strain: ''
GRMZM2G066202	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G066189	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.37291 x 10^-2	607	238	244	555	71.83%	69.46%	845	799	RefGen V2	χ2 p-value for B73 x Mo17: '.0014402' χ2 p-value for Mo17 x B73: '.0937291' Biased in favor of strain: ''
GRMZM2G066189	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.741491 x 10^-1	331	261	222	234	55.91%	51.32%	592	456	RefGen V2	χ2 p-value for B73 x Mo17: '.004015' χ2 p-value for Mo17 x B73: '.5741491' Biased in favor of strain: ''
GRMZM2G066171	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.085477 x 10^-1	126	118	94	104	51.64%	52.53%	244	198	RefGen V2	χ2 p-value for B73 x Mo17: '.6085477' χ2 p-value for Mo17 x B73: '.4772893' Biased in favor of strain: ''
GRMZM2G066171	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	9.3733 x 10^-3	52	44	45	33	54.17%	42.31%	96	78	RefGen V2	χ2 p-value for B73 x Mo17: '.0093733' χ2 p-value for Mo17 x B73: '5.03e-06' Biased in favor of strain: ''
GRMZM2G066169	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	4	1	3	0.00%	75.00%	4	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: ''
GRMZM2G066169	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	2	0	66.67%	0.00%	3	2	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G066165	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.307911 x 10^-1	26	32	18	36	44.83%	66.67%	58	54	RefGen V2	χ2 p-value for B73 x Mo17: '.4307911' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G066165	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.085 x 10^-2	12	22	16	15	35.29%	48.39%	34	31	RefGen V2	χ2 p-value for B73 x Mo17: '.0001042' χ2 p-value for Mo17 x B73: '.03085' Biased in favor of strain: ''
GRMZM2G066162	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.547211 x 10^-1	25	15	12	28	62.50%	70.00%	40	40	RefGen V2	χ2 p-value for B73 x Mo17: '.5761284' χ2 p-value for Mo17 x B73: '.6547211' Biased in favor of strain: ''
GRMZM2G066162	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	1	5	7	88.89%	58.33%	9	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0196307' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G066158	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.921713 x 10^-1	41	32	44	56	56.16%	56.00%	73	100	RefGen V2	χ2 p-value for B73 x Mo17: '.2921713' χ2 p-value for Mo17 x B73: '.2301393' Biased in favor of strain: ''
GRMZM2G066158	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	0	2	50.00%	100.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G066153	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.853151 x 10^-1	1527	740	817	1857	67.36%	69.45%	2267	2674	RefGen V2	χ2 p-value for B73 x Mo17: '.4853151' χ2 p-value for Mo17 x B73: '.0022933' Biased in favor of strain: ''
GRMZM2G066153	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.83 x 10^-7	1139	786	1100	872	59.17%	44.22%	1925	1972	RefGen V2	χ2 p-value for B73 x Mo17: '8.58e-16' χ2 p-value for Mo17 x B73: '2.83e-07' Biased in favor of strain: 'B73'
GRMZM2G066142	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G066142	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.14 x 10^-16	234	89	380	107	72.45%	21.97%	323	487	RefGen V2	χ2 p-value for B73 x Mo17: '7.14e-16' χ2 p-value for Mo17 x B73: '3.76e-35' Biased in favor of strain: 'B73'
GRMZM2G066120	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.491847 x 10^-1	35	26	33	11	57.38%	25.00%	61	44	RefGen V2	χ2 p-value for B73 x Mo17: '.2491847' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: ''
GRMZM2G066120	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.036307 x 10^-1	20	17	28	29	54.05%	50.88%	37	57	RefGen V2	χ2 p-value for B73 x Mo17: '.1036307' χ2 p-value for Mo17 x B73: '.0114459' Biased in favor of strain: ''
GRMZM2G066107	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	0	0.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G066107	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	2	6	3	80.00%	33.33%	10	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0577796' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G066101	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2195	523	1919	533	80.76%	21.74%	2718	2452	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G066101	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.05 x 10^-26	1057	256	833	586	80.50%	41.30%	1313	1419	RefGen V2	χ2 p-value for B73 x Mo17: '2.05e-26' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G066059	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.73 x 10^-13	370	78	183	94	82.59%	33.94%	448	277	RefGen V2	χ2 p-value for B73 x Mo17: '8.73e-13' χ2 p-value for Mo17 x B73: '6.87e-31' Biased in favor of strain: 'B73'
GRMZM2G066059	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.88 x 10^-12	295	106	270	131	73.57%	32.67%	401	401	RefGen V2	χ2 p-value for B73 x Mo17: '3.79e-21' χ2 p-value for Mo17 x B73: '3.88e-12' Biased in favor of strain: 'B73'
GRMZM2G066049	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1089	34	1336	46	96.97%	3.33%	1123	1382	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G066049	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	5	0.00%	100.00%	1	5	RefGen V2	χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: ''
GRMZM2G066029	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	1	0.00%	100.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G066029	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	2	0.00%	100.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G066024	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.31 x 10^-16	282	107	213	74	72.49%	25.78%	389	287	RefGen V2	χ2 p-value for B73 x Mo17: '7.13e-19' χ2 p-value for Mo17 x B73: '2.31e-16' Biased in favor of strain: 'B73'
GRMZM2G066024	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.09 x 10^-6	156	32	117	61	82.98%	34.27%	188	178	RefGen V2	χ2 p-value for B73 x Mo17: '2.09e-06' χ2 p-value for Mo17 x B73: '4.78e-20' Biased in favor of strain: 'B73'
GRMZM2G066005	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		17	2	5	2	89.47%	28.57%	19	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0349563' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: ''
GRMZM2G066005	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.47003 x 10^-2	90	49	80	54	64.75%	40.30%	139	134	RefGen V2	χ2 p-value for B73 x Mo17: '.000506' χ2 p-value for Mo17 x B73: '.0247003' Biased in favor of strain: 'B73'
GRMZM2G065989	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.290345 x 10^-1	39	36	34	77	52.00%	69.37%	75	111	RefGen V2	χ2 p-value for B73 x Mo17: '.7290345' χ2 p-value for Mo17 x B73: '.0000448' Biased in favor of strain: ''
GRMZM2G065989	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.9756 x 10^-3	379	145	226	342	72.33%	60.21%	524	568	RefGen V2	χ2 p-value for B73 x Mo17: '.0059756' χ2 p-value for Mo17 x B73: '.0010999' Biased in favor of strain: 'B73'
GRMZM2G065971	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999723 x 10^-1	24	12	30	15	66.67%	33.33%	36	45	RefGen V2	χ2 p-value for B73 x Mo17: '.9999723' χ2 p-value for Mo17 x B73: '2.10e-06' Biased in favor of strain: ''
GRMZM2G065971	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.393165 x 10^-1	16	7	16	10	69.57%	38.46%	23	26	RefGen V2	χ2 p-value for B73 x Mo17: '.0605689' χ2 p-value for Mo17 x B73: '.2393165' Biased in favor of strain: ''
GRMZM2G065970	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.585255 x 10^-1	51	24	49	36	68.00%	42.35%	75	85	RefGen V2	χ2 p-value for B73 x Mo17: '.0018227' χ2 p-value for Mo17 x B73: '.1585255' Biased in favor of strain: ''
GRMZM2G065970	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.837956 x 10^-1	100	41	74	47	70.92%	38.84%	141	121	RefGen V2	χ2 p-value for B73 x Mo17: '.2837956' χ2 p-value for Mo17 x B73: '8.44e-11' Biased in favor of strain: ''
GRMZM2G065956	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.15792 x 10^-2	220	154	73	193	58.82%	72.56%	374	266	RefGen V2	χ2 p-value for B73 x Mo17: '.0012922' χ2 p-value for Mo17 x B73: '.0415792' Biased in favor of strain: ''
GRMZM2G065956	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.6454 x 10^-1	432	427	311	401	50.29%	56.32%	859	712	RefGen V2	χ2 p-value for B73 x Mo17: '.86454' χ2 p-value for Mo17 x B73: '.0007438' Biased in favor of strain: ''
GRMZM2G065953	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.24 x 10^-10	42	0	39	0	100.00%	0.00%	42	39	RefGen V2	χ2 p-value for B73 x Mo17: '9.13e-11' χ2 p-value for Mo17 x B73: '4.24e-10' Biased in favor of strain: 'B73'
GRMZM2G065953	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.34 x 10^-9	74	0	22	2	100.00%	8.33%	74	24	RefGen V2	χ2 p-value for B73 x Mo17: '1.18e-09' χ2 p-value for Mo17 x B73: '1.34e-09' Biased in favor of strain: 'B73'
GRMZM2G065908	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.623965 x 10^-1	51	22	35	24	69.86%	40.68%	73	59	RefGen V2	χ2 p-value for B73 x Mo17: '.5623965' χ2 p-value for Mo17 x B73: '.0000229' Biased in favor of strain: ''
GRMZM2G065908	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.373519 x 10^-1	10	8	14	2	55.56%	12.50%	18	16	RefGen V2	χ2 p-value for B73 x Mo17: '.6373519' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: ''
GRMZM2G065893	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.44127 x 10^-1	113	63	68	52	64.20%	43.33%	176	120	RefGen V2	χ2 p-value for B73 x Mo17: '.000164' χ2 p-value for Mo17 x B73: '.144127' Biased in favor of strain: ''
GRMZM2G065893	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.219187 x 10^-1	104	54	115	144	65.82%	55.60%	158	259	RefGen V2	χ2 p-value for B73 x Mo17: '.8219187' χ2 p-value for Mo17 x B73: '.0001577' Biased in favor of strain: ''
GRMZM2G065868	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.665 x 10^-4	133	26	73	86	83.65%	54.09%	159	159	RefGen V2	χ2 p-value for B73 x Mo17: '5.57e-06' χ2 p-value for Mo17 x B73: '.0007665' Biased in favor of strain: 'B73'
GRMZM2G065868	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.48 x 10^-9	134	47	114	40	74.03%	25.97%	181	154	RefGen V2	χ2 p-value for B73 x Mo17: '1.00e-10' χ2 p-value for Mo17 x B73: '2.48e-09' Biased in favor of strain: 'B73'
GRMZM2G065839	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.11564 x 10^-2	237	154	195	148	60.61%	43.15%	391	343	RefGen V2	χ2 p-value for B73 x Mo17: '.000027' χ2 p-value for Mo17 x B73: '.0111564' Biased in favor of strain: 'B73'
GRMZM2G065839	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.00145 x 10^-2	137	44	76	73	75.69%	48.99%	181	149	RefGen V2	χ2 p-value for B73 x Mo17: '.0100145' χ2 p-value for Mo17 x B73: '4.73e-06' Biased in favor of strain: ''
GRMZM2G065804	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.68309 x 10^-2	126	81	47	202	60.87%	81.12%	207	249	RefGen V2	χ2 p-value for B73 x Mo17: '.0768309' χ2 p-value for Mo17 x B73: '1.30e-06' Biased in favor of strain: ''
GRMZM2G065804	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.220527 x 10^-1	129	151	117	127	46.07%	52.05%	280	244	RefGen V2	χ2 p-value for B73 x Mo17: '.1885934' χ2 p-value for Mo17 x B73: '.5220527' Biased in favor of strain: ''
GRMZM2G065800	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	6	2	15	25.00%	88.24%	8	17	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0016162' Biased in favor of strain: ''
GRMZM2G065800	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G065781	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G065781	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	5	5	5	11	50.00%	68.75%	10	16	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1336144' Biased in favor of strain: ''
GRMZM2G065757	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2993	583	3053	598	83.70%	16.38%	3576	3651	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G065757	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	7063	988	4198	1920	87.73%	31.38%	8051	6118	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G065718	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.989608 x 10^-1	21	10	6	39	67.74%	86.67%	31	45	RefGen V2	χ2 p-value for B73 x Mo17: '.8989608' χ2 p-value for Mo17 x B73: '.0044265' Biased in favor of strain: ''
GRMZM2G065718	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.129237 x 10^-1	42	17	32	46	71.19%	58.97%	59	78	RefGen V2	χ2 p-value for B73 x Mo17: '.001135' χ2 p-value for Mo17 x B73: '.1129237' Biased in favor of strain: ''
GRMZM2G065696	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.733217 x 10^-1	12	18	11	21	40.00%	65.62%	30	32	RefGen V2	χ2 p-value for B73 x Mo17: '.2733217' χ2 p-value for Mo17 x B73: '.0770999' Biased in favor of strain: ''
GRMZM2G065696	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.92 x 10^-10	107	4	42	17	96.40%	28.81%	111	59	RefGen V2	χ2 p-value for B73 x Mo17: '3.04e-11' χ2 p-value for Mo17 x B73: '6.92e-10' Biased in favor of strain: 'B73'
GRMZM2G065635	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G065635	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.63071 x 10^-1	42	49	48	102	46.15%	68.00%	91	150	RefGen V2	χ2 p-value for B73 x Mo17: '.463071' χ2 p-value for Mo17 x B73: '.0000104' Biased in favor of strain: ''
GRMZM2G065617	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.8 x 10^-26	447	94	263	69	82.62%	20.78%	541	332	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.80e-26' Biased in favor of strain: 'B73'
GRMZM2G065617	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.63 x 10^-11	195	29	78	50	87.05%	39.06%	224	128	RefGen V2	χ2 p-value for B73 x Mo17: '9.63e-11' χ2 p-value for Mo17 x B73: '3.47e-11' Biased in favor of strain: 'B73'
GRMZM2G065593	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.790353 x 10^-1	69	27	53	42	71.88%	44.21%	96	95	RefGen V2	χ2 p-value for B73 x Mo17: '.2790353' χ2 p-value for Mo17 x B73: '3.43e-06' Biased in favor of strain: ''
GRMZM2G065593	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.015081 x 10^-1	88	74	69	63	54.32%	47.73%	162	132	RefGen V2	χ2 p-value for B73 x Mo17: '.2713566' χ2 p-value for Mo17 x B73: '.6015081' Biased in favor of strain: ''
GRMZM2G065566	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.89235 x 10^-1	696	711	697	864	49.47%	55.35%	1407	1561	RefGen V2	χ2 p-value for B73 x Mo17: '.689235' χ2 p-value for Mo17 x B73: '.0000237' Biased in favor of strain: ''
GRMZM2G065566	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.97594 x 10^-2	541	321	347	798	62.76%	69.69%	862	1145	RefGen V2	χ2 p-value for B73 x Mo17: '.0149889' χ2 p-value for Mo17 x B73: '.0297594' Biased in favor of strain: ''
GRMZM2G065557	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.864275 x 10^-1	9	2	15	9	81.82%	37.50%	11	24	RefGen V2	χ2 p-value for B73 x Mo17: '.2864275' χ2 p-value for Mo17 x B73: '.0024367' Biased in favor of strain: ''
GRMZM2G065557	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.059032 x 10^-1	7	3	10	5	70.00%	33.33%	10	15	RefGen V2	χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '.1967056' Biased in favor of strain: ''
GRMZM2G065552	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.464936 x 10^-1	24	20	13	18	54.55%	58.06%	44	31	RefGen V2	χ2 p-value for B73 x Mo17: '.5464936' χ2 p-value for Mo17 x B73: '.3691714' Biased in favor of strain: ''
GRMZM2G065552	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.772972 x 10^-1	8	13	9	16	38.10%	64.00%	21	25	RefGen V2	χ2 p-value for B73 x Mo17: '.005478' χ2 p-value for Mo17 x B73: '.7772972' Biased in favor of strain: ''
GRMZM2G065532	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.0272 x 10^-3	74	17	60	56	81.32%	48.28%	91	116	RefGen V2	χ2 p-value for B73 x Mo17: '.0030272' χ2 p-value for Mo17 x B73: '.0000265' Biased in favor of strain: 'B73'
GRMZM2G065532	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.487559 x 10^-1	103	71	85	93	59.20%	52.25%	174	178	RefGen V2	χ2 p-value for B73 x Mo17: '.0152699' χ2 p-value for Mo17 x B73: '.5487559' Biased in favor of strain: ''
GRMZM2G065506	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.797125 x 10^-1	35	18	27	18	66.04%	40.00%	53	45	RefGen V2	χ2 p-value for B73 x Mo17: '.0195367' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G065506	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.340949 x 10^-1	32	12	14	25	72.73%	64.10%	44	39	RefGen V2	χ2 p-value for B73 x Mo17: '.3937845' χ2 p-value for Mo17 x B73: '.7340949' Biased in favor of strain: ''
GRMZM2G065498	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	6	2	5	33.33%	71.43%	9	7	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: ''
GRMZM2G065498	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	1	100.00%	100.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G065496	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	2	21	0	60.00%	0.00%	5	21	RefGen V2	χ2 p-value for B73 x Mo17: '.7518208' χ2 p-value for Mo17 x B73: '9.13e-11' Biased in favor of strain: ''
GRMZM2G065496	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1517	631	1472	579	70.62%	28.23%	2148	2051	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G065494	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.71 x 10^-4	151	94	150	78	61.63%	34.21%	245	228	RefGen V2	χ2 p-value for B73 x Mo17: '.000271' χ2 p-value for Mo17 x B73: '1.86e-06' Biased in favor of strain: 'B73'
GRMZM2G065494	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.559746 x 10^-1	51	20	53	25	71.83%	32.05%	71	78	RefGen V2	χ2 p-value for B73 x Mo17: '.3559746' χ2 p-value for Mo17 x B73: '8.86e-11' Biased in favor of strain: ''
GRMZM2G065480	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	0	8	75.00%	100.00%	4	8	RefGen V2	χ2 p-value for B73 x Mo17: '.7236798' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G065480	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	7	1	2	50.00%	66.67%	14	3	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G065478	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.3057 x 10^-1	84	26	64	48	76.36%	42.86%	110	112	RefGen V2	χ2 p-value for B73 x Mo17: '3.20e-08' χ2 p-value for Mo17 x B73: '.13057' Biased in favor of strain: ''
GRMZM2G065478	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.95 x 10^-7	62	2	43	9	96.88%	17.31%	64	52	RefGen V2	χ2 p-value for B73 x Mo17: '2.95e-07' χ2 p-value for Mo17 x B73: '4.34e-14' Biased in favor of strain: 'B73'
GRMZM2G065451	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.77 x 10^-8	141	22	111	32	86.50%	22.38%	163	143	RefGen V2	χ2 p-value for B73 x Mo17: '7.77e-08' χ2 p-value for Mo17 x B73: '2.75e-29' Biased in favor of strain: 'B73'
GRMZM2G065451	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.84 x 10^-11	153	31	139	48	83.15%	25.67%	184	187	RefGen V2	χ2 p-value for B73 x Mo17: '2.38e-19' χ2 p-value for Mo17 x B73: '2.84e-11' Biased in favor of strain: 'B73'

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