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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G22060 J2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.23353 x 10-1 92 74 32 18 55.42% 36.00% 166 50 TAIR8 Avg. embryo expression (dissected): '1370.79'
Avg. embryo expression (LCM): '420.235'
AT5G22060 J2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.1921 x 10-2 39 4 90.70% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22060 J2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.17216 x 10-1 236 87 73.07% 323 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22060 J2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1634 x 10-2 135 22 85.99% 157 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '17.4687'
Avg. expression score in LCM sample: '1.20523'
Tissue used: 'pure endosperm, no chalazal'
AT5G22050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '119.771'
Avg. expression score in LCM sample: '1.20523'
Tissue used: 'full endosperm'
AT5G22050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '79.5114'
Avg. embryo expression (LCM): '101.461'
AT5G22050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.07625 x 10-1 53 26 31 56 67.09% 64.37% 79 87 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.289851'
Avg. expression score for this sample: '157.117'
Avg. expression score in LCM sample: '49.1351'
Tissue used: 'pure endosperm, no chalazal'
AT5G22040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.07803 x 10-1 60 19 27 78 75.95% 74.29% 79 105 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.289851'
Avg. expression score for this sample: '178.607'
Avg. expression score in LCM sample: '49.1351'
Tissue used: 'full endosperm'
AT5G22040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.22696 x 10-1 81 43 25 17 65.32% 40.48% 124 42 TAIR8 Avg. embryo expression (dissected): '234.628'
Avg. embryo expression (LCM): '129.429'
AT5G22040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.72749 x 10-1 29 9 76.32% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.3 x 10-7 171 22 88.60% 193 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.72068 x 10-1 147 48 75.38% 195 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22035 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '21.4439'
Avg. expression score in LCM sample: '28.6021'
Tissue used: 'pure endosperm, no chalazal'
AT5G22035 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '30.4828'
Avg. expression score in LCM sample: '28.6021'
Tissue used: 'full endosperm'
AT5G22035 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '24.2252'
Avg. embryo expression (LCM): '30.9443'
AT5G22035 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22035 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22035 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22030 UBP8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.0644'
Avg. expression score in LCM sample: '15.0654'
Tissue used: 'pure endosperm, no chalazal'
AT5G22030 UBP8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.8385'
Avg. expression score in LCM sample: '15.0654'
Tissue used: 'full endosperm'
AT5G22030 UBP8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '17.6088'
Avg. embryo expression (LCM): '19.5914'
AT5G22030 UBP8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22030 UBP8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22030 UBP8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.5 x 10-5 36 0 0 9 100.00% 100.00% 36 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '390.82'
Avg. expression score in LCM sample: '20.239'
Tissue used: 'pure endosperm, no chalazal'
AT5G22020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 436 0 30 417 100.00% 93.29% 436 447 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1621.53'
Avg. expression score in LCM sample: '20.239'
Tissue used: 'full endosperm'
AT5G22020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.46965 x 10-1 7 1 3 1 87.50% 25.00% 8 4 TAIR8 Avg. embryo expression (dissected): '258.297'
Avg. embryo expression (LCM): '126.276'
AT5G22020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.5805 x 10-2 29 4 87.88% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.1191 x 10-1 797 35 95.79% 832 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.3 x 10-9 1652 6 99.64% 1658 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22010 RFC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.67594 x 10-1 128 43 63 67 74.85% 51.54% 171 130 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '200.379'
Avg. expression score in LCM sample: '64.127'
Tissue used: 'pure endosperm, no chalazal'
AT5G22010 RFC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.02297 x 10-1 139 61 63 126 69.50% 66.67% 200 189 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '270.24'
Avg. expression score in LCM sample: '64.127'
Tissue used: 'full endosperm'
AT5G22010 RFC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.81595 x 10-1 125 79 33 12 61.27% 26.67% 204 45 TAIR8 Avg. embryo expression (dissected): '283.352'
Avg. embryo expression (LCM): '186.281'
AT5G22010 RFC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.3718 x 10-2 30 6 83.33% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22010 RFC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.59402 x 10-1 48 15 76.19% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22010 RFC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.2 x 10-10 131 14 90.34% 145 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22000 RHF2A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 1 1 50.00% 50.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.19935'
Avg. expression score for this sample: '96.8891'
Avg. expression score in LCM sample: '37.1563'
Tissue used: 'pure endosperm, no chalazal'
AT5G22000 RHF2A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.32391 x 10-1 13 2 0 7 86.67% 100.00% 15 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.19935'
Avg. expression score for this sample: '148.142'
Avg. expression score in LCM sample: '37.1563'
Tissue used: 'full endosperm'
AT5G22000 RHF2A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '121.767'
Avg. embryo expression (LCM): '74.9873'
AT5G22000 RHF2A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22000 RHF2A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.85185 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22000 RHF2A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.85185 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21990 TPR7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '115.3'
Avg. expression score in LCM sample: '100.299'
Tissue used: 'pure endosperm, no chalazal'
AT5G21990 TPR7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '176.743'
Avg. expression score in LCM sample: '100.299'
Tissue used: 'full endosperm'
AT5G21990 TPR7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '81.445'
Avg. embryo expression (LCM): '58.5104'
AT5G21990 TPR7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21990 TPR7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21990 TPR7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.05961 x 10-1 9 12 4 3 42.86% 42.86% 21 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.89287'
Avg. expression score for this sample: '77.144'
Avg. expression score in LCM sample: '35.2309'
Tissue used: 'pure endosperm, no chalazal'
AT5G21970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.35912 x 10-1 41 9 18 26 82.00% 59.09% 50 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.89287'
Avg. expression score for this sample: '121.19'
Avg. expression score in LCM sample: '35.2309'
Tissue used: 'full endosperm'
AT5G21970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 16 13 2 0 55.17% 0.00% 29 2 TAIR8 Avg. embryo expression (dissected): '188.215'
Avg. embryo expression (LCM): '235.423'
AT5G21970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.9559 x 10-1 11 7 61.11% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.08608 x 10-1 17 4 80.95% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.542676'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G21960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.765832'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G21960 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G21960 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21960 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21960 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.47153 x 10-1 4 6 0 18 40.00% 100.00% 10 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.633684'
Avg. expression score for this sample: '12.6817'
Avg. expression score in LCM sample: '21.2532'
Tissue used: 'pure endosperm, no chalazal'
AT5G21950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 4 1 9 0.00% 90.00% 4 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.633684'
Avg. expression score for this sample: '11.2293'
Avg. expression score in LCM sample: '21.2532'
Tissue used: 'full endosperm'
AT5G21950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '3.9167'
Avg. embryo expression (LCM): '2.788'
AT5G21950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.38647 x 10-1 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.143'
Avg. expression score in LCM sample: '5.08548'
Tissue used: 'pure endosperm, no chalazal'
AT5G21940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '38.3561'
Avg. expression score in LCM sample: '5.08548'
Tissue used: 'full endosperm'
AT5G21940 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '51.756'
Avg. embryo expression (LCM): '18.4485'
AT5G21940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21930 PAA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 1 2 2 83.33% 50.00% 6 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '45.7762'
Avg. expression score in LCM sample: '26.1476'
Tissue used: 'pure endosperm, no chalazal'
AT5G21930 PAA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 9 10 0 11 47.37% 100.00% 19 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '41.1271'
Avg. expression score in LCM sample: '26.1476'
Tissue used: 'full endosperm'
AT5G21930 PAA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.22393 x 10-1 6 4 2 3 60.00% 60.00% 10 5 TAIR8 Avg. embryo expression (dissected): '150.342'
Avg. embryo expression (LCM): '40.2251'
AT5G21930 PAA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.41771 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21930 PAA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.2444 x 10-2 20 1 95.24% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21930 PAA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.46534 x 10-1 19 4 82.61% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21920 YLMG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.91787 x 10-1 22 7 10 20 75.86% 66.67% 29 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.896558'
Avg. expression score for this sample: '258.972'
Avg. expression score in LCM sample: '103.664'
Tissue used: 'pure endosperm, no chalazal'
AT5G21920 YLMG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 23 18 8 26 56.10% 76.47% 41 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.896558'
Avg. expression score for this sample: '165.778'
Avg. expression score in LCM sample: '103.664'
Tissue used: 'full endosperm'
AT5G21920 YLMG2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.74016 x 10-1 42 33 13 9 56.00% 40.91% 75 22 TAIR8 Avg. embryo expression (dissected): '620.005'
Avg. embryo expression (LCM): '223.405'
AT5G21920 YLMG2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21920 YLMG2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.51541 x 10-1 33 11 75.00% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21920 YLMG2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.7436 x 10-1 14 3 82.35% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G21910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.581761'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G21910 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.39368'
Avg. embryo expression (LCM): '0'
AT5G21910 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.83887 x 10-1 21 0 21 0 100.00% 0.00% 21 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.8e-09'
Avg. expression score for this sample: '26.0449'
Avg. expression score in LCM sample: '23.4873'
Tissue used: 'pure endosperm, no chalazal'
AT5G21900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.0 x 10-8 45 0 96 2 100.00% 2.04% 45 98 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.8e-09'
Avg. expression score for this sample: '69.7549'
Avg. expression score in LCM sample: '23.4873'
Tissue used: 'full endosperm'
AT5G21900 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.36461 x 10-1 11 1 2 0 91.67% 0.00% 12 2 TAIR8 Avg. embryo expression (dissected): '17.0294'
Avg. embryo expression (LCM): '20.0686'
AT5G21900 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.306 x 10-3 0 11 0.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21900 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1 x 10-29 1 272 0.37% 273 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G21900 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 152 0 100.00% 152 TAIR8 Mutant effect: 'N/A (not a MEG)'