| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G067049 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.67 x 10-11 | 258 | 46 | 101 | 49 | 84.87% | 32.67% | 304 | 150 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.67e-11' χ2 p-value for Mo17 x B73: '1.01e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G067049 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.25 x 10-6 | 863 | 673 | 954 | 596 | 56.18% | 38.45% | 1536 | 1550 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.25e-06' χ2 p-value for Mo17 x B73: '9.62e-20' Biased in favor of strain: 'B73' |
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| GRMZM2G067036 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.36 x 10-26 | 775 | 328 | 774 | 411 | 70.26% | 34.68% | 1103 | 1185 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '5.36e-26' Biased in favor of strain: 'B73' |
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| GRMZM2G067036 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.12406 x 10-1 | 1016 | 404 | 382 | 740 | 71.55% | 65.95% | 1420 | 1122 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000951' χ2 p-value for Mo17 x B73: '.612406' Biased in favor of strain: '' |
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| GRMZM2G067028 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.0 x 10-12 | 1019 | 327 | 588 | 651 | 75.71% | 52.54% | 1346 | 1239 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.00e-12' χ2 p-value for Mo17 x B73: '5.27e-26' Biased in favor of strain: 'B73' |
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| GRMZM2G067028 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.4004 x 10-3 | 328 | 259 | 385 | 247 | 55.88% | 39.08% | 587 | 632 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0044004' χ2 p-value for Mo17 x B73: '4.03e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G067022 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 3 | 4 | 50.00% | 57.14% | 4 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: '' |
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| GRMZM2G067022 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 10 | 3 | 3 | 44.44% | 50.00% | 18 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454974' χ2 p-value for Mo17 x B73: '.3864762' Biased in favor of strain: '' |
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| GRMZM2G067019 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.893059 x 10-1 | 76 | 36 | 53 | 68 | 67.86% | 56.20% | 112 | 121 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7893059' χ2 p-value for Mo17 x B73: '.0145765' Biased in favor of strain: '' |
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| GRMZM2G067019 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.345 x 10-3 | 113 | 74 | 104 | 61 | 60.43% | 36.97% | 187 | 165 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.004345' χ2 p-value for Mo17 x B73: '.0008153' Biased in favor of strain: 'B73' |
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| GRMZM2G066996 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3057 x 10-1 | 10 | 18 | 5 | 25 | 35.71% | 83.33% | 28 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.13057' χ2 p-value for Mo17 x B73: '.0002607' Biased in favor of strain: '' |
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| GRMZM2G066996 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.164124 x 10-1 | 6 | 10 | 5 | 14 | 37.50% | 73.68% | 16 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0133273' χ2 p-value for Mo17 x B73: '.5164124' Biased in favor of strain: '' |
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| GRMZM2G066923 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.05329 x 10-2 | 346 | 137 | 158 | 159 | 71.64% | 50.16% | 483 | 317 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0205329' χ2 p-value for Mo17 x B73: '4.51e-10' Biased in favor of strain: '' |
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| GRMZM2G066923 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.58 x 10-6 | 108 | 27 | 64 | 20 | 80.00% | 23.81% | 135 | 84 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.14e-12' χ2 p-value for Mo17 x B73: '1.58e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G066885 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.1 x 10-12 | 47 | 0 | 49 | 0 | 100.00% | 0.00% | 47 | 49 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.10e-12' χ2 p-value for Mo17 x B73: '2.56e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G066885 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 12 | 0 | 3 | 0 | 100.00% | 0.00% | 12 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143062' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G066876 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.016739 x 10-1 | 148 | 70 | 121 | 110 | 67.89% | 47.62% | 218 | 231 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7016739' χ2 p-value for Mo17 x B73: '8.19e-10' Biased in favor of strain: '' |
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| GRMZM2G066876 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.987 x 10-4 | 340 | 258 | 325 | 212 | 56.86% | 39.48% | 598 | 537 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0007987' χ2 p-value for Mo17 x B73: '1.08e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G066870 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 1 | 0 | 100.00% | 0.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G066870 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 1 | 100.00% | 50.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| GRMZM2G066867 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.36499 x 10-2 | 33 | 7 | 18 | 14 | 82.50% | 43.75% | 40 | 32 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0336499' χ2 p-value for Mo17 x B73: '.0059595' Biased in favor of strain: '' |
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| GRMZM2G066867 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.814974 x 10-1 | 30 | 18 | 23 | 22 | 62.50% | 48.89% | 48 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.8814974' Biased in favor of strain: '' |
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| GRMZM2G066860 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.703686 x 10-1 | 173 | 138 | 171 | 192 | 55.63% | 52.89% | 311 | 363 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0471814' χ2 p-value for Mo17 x B73: '.2703686' Biased in favor of strain: '' |
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| GRMZM2G066860 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.414847 x 10-1 | 154 | 67 | 92 | 100 | 69.68% | 52.08% | 221 | 192 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3414847' χ2 p-value for Mo17 x B73: '.0000181' Biased in favor of strain: '' |
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| GRMZM2G066851 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 2 | 7 | 1 | 80.00% | 12.50% | 10 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3710998' χ2 p-value for Mo17 x B73: '.001154' Biased in favor of strain: '' |
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| GRMZM2G066851 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.21 x 10-5 | 114 | 45 | 76 | 34 | 71.70% | 30.91% | 159 | 110 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.45e-08' χ2 p-value for Mo17 x B73: '.0000621' Biased in favor of strain: 'B73' |
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| GRMZM2G066815 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.12 x 10-6 | 1481 | 1122 | 1176 | 963 | 56.90% | 45.02% | 2603 | 2139 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.97e-12' χ2 p-value for Mo17 x B73: '4.12e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G066815 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.72293 x 10-2 | 3184 | 1496 | 1912 | 2926 | 68.03% | 60.48% | 4680 | 4838 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0472293' χ2 p-value for Mo17 x B73: '6.91e-20' Biased in favor of strain: '' |
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| GRMZM2G066784 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 2 | 0 | 0.00% | 0.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G066784 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.791 x 10-4 | 17 | 2 | 22 | 4 | 89.47% | 15.38% | 19 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005791' χ2 p-value for Mo17 x B73: '.0004154' Biased in favor of strain: 'B73' |
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| GRMZM2G066759 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G066759 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 8 | 0.00% | 100.00% | 3 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G066755 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.0 x 10-17 | 529 | 115 | 321 | 84 | 82.14% | 20.74% | 644 | 405 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.00e-17' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G066755 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.87 x 10-7 | 253 | 125 | 166 | 88 | 66.93% | 34.65% | 378 | 254 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.59e-11' χ2 p-value for Mo17 x B73: '9.87e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G066749 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.9366 x 10-3 | 369 | 227 | 259 | 202 | 61.91% | 43.82% | 596 | 461 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.01e-09' χ2 p-value for Mo17 x B73: '.0079366' Biased in favor of strain: 'B73' |
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| GRMZM2G066749 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.58 x 10-8 | 410 | 118 | 304 | 303 | 77.65% | 49.92% | 528 | 607 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.58e-08' χ2 p-value for Mo17 x B73: '2.07e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G066650 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.490482 x 10-1 | 206 | 89 | 123 | 151 | 69.83% | 55.11% | 295 | 274 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2490482' χ2 p-value for Mo17 x B73: '.0000495' Biased in favor of strain: '' |
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| GRMZM2G066650 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.985354 x 10-1 | 123 | 117 | 120 | 108 | 51.25% | 47.37% | 240 | 228 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6985354' χ2 p-value for Mo17 x B73: '.4267767' Biased in favor of strain: '' |
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| GRMZM2G066636 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 10 | 0.00% | 100.00% | 2 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: '' |
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| GRMZM2G066636 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 9 | 100.00% | 0 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G066618 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.0 x 10-30 | 527 | 68 | 259 | 110 | 88.57% | 29.81% | 595 | 369 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.86e-30' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G066618 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.4 x 10-9 | 409 | 630 | 338 | 512 | 39.36% | 60.24% | 1039 | 850 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.07e-12' χ2 p-value for Mo17 x B73: '2.40e-09' Biased in favor of strain: 'Mo17' |
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| GRMZM2G066615 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.52 x 10-19 | 547 | 286 | 452 | 203 | 65.67% | 30.99% | 833 | 655 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.52e-19' χ2 p-value for Mo17 x B73: '2.26e-22' Biased in favor of strain: 'B73' |
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| GRMZM2G066615 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.33 x 10-17 | 964 | 273 | 591 | 617 | 77.93% | 51.08% | 1237 | 1208 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.33e-17' χ2 p-value for Mo17 x B73: '1.40e-30' Biased in favor of strain: 'B73' |
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| GRMZM2G066614 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 1.58 x 10-5 | 78 | 77 | 122 | 83 | 50.32% | 40.49% | 155 | 205 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000158' χ2 p-value for Mo17 x B73: '1.85e-15' Biased in favor of strain: '' |
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| GRMZM2G066614 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.577 x 10-4 | 378 | 281 | 377 | 272 | 57.36% | 41.91% | 659 | 649 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001577' χ2 p-value for Mo17 x B73: '.0000376' Biased in favor of strain: 'B73' |
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| GRMZM2G066612 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.658029 x 10-1 | 53 | 21 | 26 | 21 | 71.62% | 44.68% | 74 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001993' χ2 p-value for Mo17 x B73: '.4658029' Biased in favor of strain: '' |
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| GRMZM2G066612 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.629712 x 10-1 | 52 | 35 | 33 | 54 | 59.77% | 62.07% | 87 | 87 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1723709' χ2 p-value for Mo17 x B73: '.3629712' Biased in favor of strain: '' |
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| GRMZM2G066578 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G066578 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.52 x 10-6 | 76 | 6 | 67 | 23 | 92.68% | 25.56% | 82 | 90 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.07e-14' χ2 p-value for Mo17 x B73: '3.52e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G066575 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.263 x 10-4 | 118 | 66 | 169 | 80 | 64.13% | 32.13% | 184 | 249 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001263' χ2 p-value for Mo17 x B73: '1.70e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G066575 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.58196 x 10-2 | 62 | 20 | 85 | 58 | 75.61% | 40.56% | 82 | 143 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0858196' χ2 p-value for Mo17 x B73: '3.53e-11' Biased in favor of strain: '' |
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| GRMZM2G066538 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 1 | 0.00% | 100.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G066538 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 1 | 2 | 0.00% | 66.67% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G066528 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.615133 x 10-1 | 16 | 9 | 16 | 8 | 64.00% | 33.33% | 25 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1615133' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: '' |
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| GRMZM2G066528 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 2 | 66.67% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G066516 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1541 x 10-3 | 9 | 42 | 2 | 30 | 17.65% | 93.75% | 51 | 32 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.12e-13' χ2 p-value for Mo17 x B73: '.0011541' Biased in favor of strain: 'Mo17' |
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| GRMZM2G066516 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.84 x 10-5 | 350 | 609 | 389 | 518 | 36.50% | 57.11% | 959 | 907 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.09e-17' χ2 p-value for Mo17 x B73: '.0000184' Biased in favor of strain: 'Mo17' |
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| GRMZM2G066496 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.83307 x 10-2 | 296 | 201 | 255 | 214 | 59.56% | 45.63% | 497 | 469 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000203' χ2 p-value for Mo17 x B73: '.0583307' Biased in favor of strain: '' |
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| GRMZM2G066496 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.37 x 10-5 | 383 | 127 | 198 | 263 | 75.10% | 57.05% | 510 | 461 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000537' χ2 p-value for Mo17 x B73: '.0000119' Biased in favor of strain: 'B73' |
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| GRMZM2G066485 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.811981 x 10-1 | 68 | 56 | 71 | 48 | 54.84% | 40.34% | 124 | 119 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2811981' χ2 p-value for Mo17 x B73: '.0349958' Biased in favor of strain: '' |
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| GRMZM2G066485 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.530417 x 10-1 | 81 | 24 | 43 | 65 | 77.14% | 60.19% | 105 | 108 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0227758' χ2 p-value for Mo17 x B73: '.1530417' Biased in favor of strain: '' |
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| GRMZM2G066460 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.16 x 10-7 | 178 | 156 | 110 | 397 | 53.29% | 78.30% | 334 | 507 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.16e-07' χ2 p-value for Mo17 x B73: '2.72e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM2G066460 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.77 x 10-8 | 306 | 633 | 161 | 275 | 32.59% | 63.07% | 939 | 436 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.39e-26' χ2 p-value for Mo17 x B73: '4.77e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM2G066448 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 2 | 0.00% | 100.00% | 4 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G066448 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G066441 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.4891 x 10-3 | 24 | 0 | 18 | 13 | 100.00% | 41.94% | 24 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0034891' Biased in favor of strain: 'B73' |
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| GRMZM2G066441 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.285 x 10-4 | 139 | 89 | 222 | 125 | 60.96% | 36.02% | 228 | 347 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009285' χ2 p-value for Mo17 x B73: '1.92e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G066432 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 0 | 0 | 100.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G066432 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.57 x 10-7 | 55 | 0 | 22 | 0 | 100.00% | 0.00% | 55 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.57e-07' χ2 p-value for Mo17 x B73: '3.28e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G066428 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G066428 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 0 | 0 | 25.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G066426 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 5 | 0 | 0.00% | 0.00% | 2 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G066426 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 3 | 4 | 50.00% | 57.14% | 4 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4794928' χ2 p-value for Mo17 x B73: '.59298' Biased in favor of strain: '' |
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| GRMZM2G066413 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.456332 x 10-1 | 52 | 24 | 30 | 86 | 68.42% | 74.14% | 76 | 116 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7456332' χ2 p-value for Mo17 x B73: '.0878252' Biased in favor of strain: '' |
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| GRMZM2G066413 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.85985 x 10-1 | 87 | 51 | 86 | 75 | 63.04% | 46.58% | 138 | 161 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0021802' χ2 p-value for Mo17 x B73: '.385985' Biased in favor of strain: '' |
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| GRMZM2G066400 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.042 x 10-4 | 984 | 826 | 687 | 548 | 54.36% | 44.37% | 1810 | 1235 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002042' χ2 p-value for Mo17 x B73: '.0000764' Biased in favor of strain: 'B73' |
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| GRMZM2G066400 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.865446 x 10-1 | 495 | 231 | 281 | 462 | 68.18% | 62.18% | 726 | 743 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3865446' χ2 p-value for Mo17 x B73: '.0094832' Biased in favor of strain: '' |
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| GRMZM2G066369 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 4 | 1 | 3 | 60.00% | 75.00% | 10 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.654709' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: '' |
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| GRMZM2G066369 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.19 x 10-7 | 50 | 137 | 60 | 129 | 26.74% | 68.25% | 187 | 189 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.99e-10' χ2 p-value for Mo17 x B73: '5.19e-07' Biased in favor of strain: 'Mo17' |
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| GRMZM2G066358 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.74 x 10-6 | 20 | 0 | 82 | 0 | 100.00% | 0.00% | 20 | 82 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.74e-06' χ2 p-value for Mo17 x B73: '1.36e-19' Biased in favor of strain: 'B73' |
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| GRMZM2G066358 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 14 | 0 | 0 | 0 | 100.00% | 14 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G066343 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 0 | 0 | 100.00% | 6 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G066343 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G066341 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 12 | 15 | 15 | 15 | 44.44% | 50.00% | 27 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G066341 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.054571 x 10-1 | 6 | 5 | 4 | 10 | 54.55% | 71.43% | 11 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3937584' χ2 p-value for Mo17 x B73: '.7054571' Biased in favor of strain: '' |
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| GRMZM2G066326 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 8 | 4 | 100.00% | 33.33% | 7 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G066326 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.9821 x 10-3 | 89 | 42 | 99 | 60 | 67.94% | 37.74% | 131 | 159 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000402' χ2 p-value for Mo17 x B73: '.0019821' Biased in favor of strain: 'B73' |
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| GRMZM2G066321 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 5 | 4 | 5 | 54.55% | 55.56% | 11 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7630246' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: '' |
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| GRMZM2G066321 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G066293 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.452828 x 10-1 | 71 | 35 | 28 | 72 | 66.98% | 72.00% | 106 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9452828' χ2 p-value for Mo17 x B73: '.2578992' Biased in favor of strain: '' |
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| GRMZM2G066293 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.388827 x 10-1 | 29 | 13 | 19 | 17 | 69.05% | 47.22% | 42 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0135547' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: '' |
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| GRMZM2G066290 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 6388 | 3875 | 6508 | 4380 | 62.24% | 40.23% | 10263 | 10888 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G066290 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.27305 x 10-2 | 1517 | 676 | 922 | 1416 | 69.17% | 60.56% | 2193 | 2338 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0127305' χ2 p-value for Mo17 x B73: '3.87e-10' Biased in favor of strain: '' |
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| GRMZM2G066274 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G066274 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.457786 x 10-1 | 152 | 136 | 194 | 159 | 52.78% | 45.04% | 288 | 353 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3457786' χ2 p-value for Mo17 x B73: '.0624817' Biased in favor of strain: '' |
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| GRMZM2G066256 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G066256 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 0 | 100.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G066248 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.74 x 10-5 | 1 | 51 | 0 | 34 | 1.92% | 100.00% | 52 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.00e-23' χ2 p-value for Mo17 x B73: '.0000374' Biased in favor of strain: 'Mo17' |
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| GRMZM2G066248 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 19 | 0 | 6 | 0.00% | 100.00% | 19 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000131' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |