Displaying data sets 26201 - 26300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G22240 OFP10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22240 OFP10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22220 E2F1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G22220 E2F1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G22220 E2F1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G22220 E2F1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22220 E2F1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22220 E2F1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 13 5 6 5 72.22% 45.45% 18 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.056095'
Avg. expression score for this sample: '40.4137'
Avg. expression score in LCM sample: '6.30541'
Tissue used: 'pure endosperm, no chalazal'
AT5G22210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.4757 x 10-2 63 14 10 37 81.82% 78.72% 77 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.056095'
Avg. expression score for this sample: '88.3352'
Avg. expression score in LCM sample: '6.30541'
Tissue used: 'full endosperm'
AT5G22210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.80172 x 10-1 6 3 1 1 66.67% 50.00% 9 2 TAIR8 Avg. embryo expression (dissected): '28.3552'
Avg. embryo expression (LCM): '10.7753'
AT5G22210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.9968 x 10-2 10 8 55.56% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.7881 x 10-2 4 4 50.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.6989 x 10-1 15 2 88.24% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 2.8 x 10-14 121 1 1 20 99.18% 95.24% 122 21 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '188.664'
Avg. expression score in LCM sample: '188.677'
Tissue used: 'pure endosperm, no chalazal'
AT5G22200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 1.0 x 10-30 266 1 1 23 99.63% 95.83% 267 24 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '600.099'
Avg. expression score in LCM sample: '188.677'
Tissue used: 'full endosperm'
AT5G22200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 3 0 0 0 100.00% 3 0 TAIR8 Avg. embryo expression (dissected): '11.6206'
Avg. embryo expression (LCM): '0'
AT5G22200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.81838 x 10-1 119 3 97.54% 122 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G22200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 33 0 100.00% 33 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G22200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.1498 x 10-2 436 0 100.00% 436 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G22190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.742178'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G22190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.515464'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G22190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G22190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.50575'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G22180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.356861'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G22180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G22180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G22170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.336298'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G22170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G22170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.491982'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G22160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G22160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G22160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.03665 x 10-1 18 9 9 7 66.67% 43.75% 27 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.350363'
Avg. expression score for this sample: '25.8191'
Avg. expression score in LCM sample: '66.802'
Tissue used: 'pure endosperm, no chalazal'
AT5G22150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.33222 x 10-1 5 0 8 5 100.00% 38.46% 5 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.350363'
Avg. expression score for this sample: '4.50074'
Avg. expression score in LCM sample: '66.802'
Tissue used: 'full endosperm'
AT5G22150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28571 x 10-1 0 1 3 0 0.00% 0.00% 1 3 TAIR8 Avg. embryo expression (dissected): '4.05303'
Avg. embryo expression (LCM): '0'
AT5G22150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.91354 x 10-1 44 19 69.84% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.15 x 10-4 3 20 13.04% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 141 50 63 89 73.82% 58.55% 191 152 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.397253'
Avg. expression score for this sample: '86.1452'
Avg. expression score in LCM sample: '98.6377'
Tissue used: 'pure endosperm, no chalazal'
AT5G22140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.38134 x 10-1 50 13 68 153 79.37% 69.23% 63 221 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.397253'
Avg. expression score for this sample: '56.3385'
Avg. expression score in LCM sample: '98.6377'
Tissue used: 'full endosperm'
AT5G22140 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.42812 x 10-1 191 130 54 36 59.50% 40.00% 321 90 TAIR8 Avg. embryo expression (dissected): '154.711'
Avg. embryo expression (LCM): '131.84'
AT5G22140 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.81 x 10-4 30 1 96.77% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22140 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.32562 x 10-1 173 84 67.32% 257 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22140 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.74 x 10-4 145 30 82.86% 175 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22130 PNT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 62 26 39 65 70.45% 62.50% 88 104 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.651765'
Avg. expression score for this sample: '80.0273'
Avg. expression score in LCM sample: '48.8118'
Tissue used: 'pure endosperm, no chalazal'
AT5G22130 PNT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.00258 x 10-1 57 35 38 70 61.96% 64.81% 92 108 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.651765'
Avg. expression score for this sample: '77.1543'
Avg. expression score in LCM sample: '48.8118'
Tissue used: 'full endosperm'
AT5G22130 PNT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.33571 x 10-1 73 75 38 23 49.32% 37.70% 148 61 TAIR8 Avg. embryo expression (dissected): '134.962'
Avg. embryo expression (LCM): '63.559'
AT5G22130 PNT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.42338 x 10-1 15 6 71.43% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22130 PNT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.57 x 10-4 370 119 75.66% 489 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22130 PNT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2 x 10-12 246 33 88.17% 279 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.1003'
Avg. expression score in LCM sample: '18.4018'
Tissue used: 'pure endosperm, no chalazal'
AT5G22120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '44.9153'
Avg. expression score in LCM sample: '18.4018'
Tissue used: 'full endosperm'
AT5G22120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '12.8229'
Avg. embryo expression (LCM): '13.0986'
AT5G22120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22110 DPB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 2 0 3 60.00% 100.00% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.645957'
Avg. expression score for this sample: '9.5488'
Avg. expression score in LCM sample: '11.1704'
Tissue used: 'pure endosperm, no chalazal'
AT5G22110 DPB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.9965 x 10-1 14 4 6 13 77.78% 68.42% 18 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.645957'
Avg. expression score for this sample: '16.3207'
Avg. expression score in LCM sample: '11.1704'
Tissue used: 'full endosperm'
AT5G22110 DPB2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.03188 x 10-1 1 12 0 1 7.69% 100.00% 13 1 TAIR8 Avg. embryo expression (dissected): '28.4223'
Avg. embryo expression (LCM): '36.8343'
AT5G22110 DPB2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22110 DPB2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.87493 x 10-1 34 6 85.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22110 DPB2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.96311 x 10-1 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 1 1 0.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.09073'
Avg. expression score in LCM sample: '5.29125'
Tissue used: 'pure endosperm, no chalazal'
AT5G22100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 2 1 7 33.33% 87.50% 3 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.73688'
Avg. expression score in LCM sample: '5.29125'
Tissue used: 'full endosperm'
AT5G22100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.66667 x 10-1 0 4 1 0 0.00% 0.00% 4 1 TAIR8 Avg. embryo expression (dissected): '12.0567'
Avg. embryo expression (LCM): '24.4264'
AT5G22100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.4 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22100 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 13 6 68.42% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 12 6 66.67% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 4 1 4 63.64% 80.00% 11 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.474985'
Avg. expression score for this sample: '9.28151'
Avg. expression score in LCM sample: '.764292'
Tissue used: 'pure endosperm, no chalazal'
AT5G22090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.40952 x 10-1 17 9 6 26 65.38% 81.25% 26 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.474985'
Avg. expression score for this sample: '21.4532'
Avg. expression score in LCM sample: '.764292'
Tissue used: 'full endosperm'
AT5G22090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.77713 x 10-1 3 8 1 2 27.27% 66.67% 11 3 TAIR8 Avg. embryo expression (dissected): '28.5821'
Avg. embryo expression (LCM): '30.1029'
AT5G22090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.9693 x 10-2 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '643.329'
Avg. expression score in LCM sample: '88.2169'
Tissue used: 'pure endosperm, no chalazal'
AT5G22080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '674.493'
Avg. expression score in LCM sample: '88.2169'
Tissue used: 'full endosperm'
AT5G22080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '431.636'
Avg. embryo expression (LCM): '266.242'
AT5G22080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 1 2 66.67% 66.67% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.587368'
Avg. expression score for this sample: '102.017'
Avg. expression score in LCM sample: '100.019'
Tissue used: 'pure endosperm, no chalazal'
AT5G22070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.84085 x 10-1 14 1 5 7 93.33% 58.33% 15 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.587368'
Avg. expression score for this sample: '153.406'
Avg. expression score in LCM sample: '100.019'
Tissue used: 'full endosperm'
AT5G22070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 0 3 0 0 0.00% 3 0 TAIR8 Avg. embryo expression (dissected): '78.218'
Avg. embryo expression (LCM): '78.78'
AT5G22070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.57393 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.878 x 10-3 35 0 100.00% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G22060 J2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.457 x 10-3 103 28 42 126 78.63% 75.00% 131 168 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000056'
Avg. expression score for this sample: '1321.6'
Avg. expression score in LCM sample: '394.771'
Tissue used: 'pure endosperm, no chalazal'
AT5G22060 J2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.929 x 10-3 74 25 24 116 74.75% 82.86% 99 140 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000056'
Avg. expression score for this sample: '688.532'
Avg. expression score in LCM sample: '394.771'
Tissue used: 'full endosperm'