GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G069195	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.27 x 10^-17	349	56	239	86	86.17%	26.46%	405	325	RefGen V2	χ2 p-value for B73 x Mo17: '8.27e-17' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G069195	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.79 x 10^-8	2861	2456	2914	2084	53.81%	41.70%	5317	4998	RefGen V2	χ2 p-value for B73 x Mo17: '2.79e-08' χ2 p-value for Mo17 x B73: '7.92e-32' Biased in favor of strain: 'B73'
GRMZM2G069177	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.378702 x 10^-1	369	419	319	331	46.83%	50.92%	788	650	RefGen V2	χ2 p-value for B73 x Mo17: '.0748837' χ2 p-value for Mo17 x B73: '.6378702' Biased in favor of strain: ''
GRMZM2G069177	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.084747 x 10^-1	559	321	331	593	63.52%	64.18%	880	924	RefGen V2	χ2 p-value for B73 x Mo17: '.0478631' χ2 p-value for Mo17 x B73: '.1084747' Biased in favor of strain: ''
GRMZM2G069174	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G069174	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	1	2	0.00%	66.67%	1	3	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G069162	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		10	2	8	0	83.33%	0.00%	12	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0209213' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G069162	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		19	0	2	0	100.00%	0.00%	19	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0020548' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G069106	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.21 x 10^-23	414	55	232	139	88.27%	37.47%	469	371	RefGen V2	χ2 p-value for B73 x Mo17: '3.21e-23' χ2 p-value for Mo17 x B73: '8.15e-33' Biased in favor of strain: 'B73'
GRMZM2G069106	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.29 x 10^-19	389	174	316	108	69.09%	25.47%	563	424	RefGen V2	χ2 p-value for B73 x Mo17: '1.29e-19' χ2 p-value for Mo17 x B73: '5.45e-24' Biased in favor of strain: 'B73'
GRMZM2G069102	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	643	56	599	56	91.99%	8.55%	699	655	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G069102	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	873	44	464	69	95.20%	12.95%	917	533	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G069098	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	5	3	8	16.67%	72.73%	6	11	RefGen V2	χ2 p-value for B73 x Mo17: '.0093742' χ2 p-value for Mo17 x B73: '.6698155' Biased in favor of strain: ''
GRMZM2G069098	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.218148 x 10^-1	37	34	36	25	52.11%	40.98%	71	61	RefGen V2	χ2 p-value for B73 x Mo17: '.7218148' χ2 p-value for Mo17 x B73: '.159011' Biased in favor of strain: ''
GRMZM2G069095	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	1	0	100.00%	0.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G069095	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	0	100.00%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G069085	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.3 x 10^-12	97	0	31	0	100.00%	0.00%	97	31	RefGen V2	χ2 p-value for B73 x Mo17: '3.30e-12' χ2 p-value for Mo17 x B73: '3.43e-15' Biased in favor of strain: 'B73'
GRMZM2G069085	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.52 x 10^-23	152	1	100	0	99.35%	0.00%	153	100	RefGen V2	χ2 p-value for B73 x Mo17: '2.83e-34' χ2 p-value for Mo17 x B73: '1.52e-23' Biased in favor of strain: 'B73'
GRMZM2G069078	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.3039 x 10^-1	27	8	16	22	77.14%	57.89%	35	38	RefGen V2	χ2 p-value for B73 x Mo17: '.00132' χ2 p-value for Mo17 x B73: '.33039' Biased in favor of strain: ''
GRMZM2G069078	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.164124 x 10^-1	11	1	5	14	91.67%	73.68%	12	19	RefGen V2	χ2 p-value for B73 x Mo17: '.0661941' χ2 p-value for Mo17 x B73: '.5164124' Biased in favor of strain: ''
GRMZM2G069061	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.9475 x 10^-3	207	73	121	144	73.93%	54.34%	280	265	RefGen V2	χ2 p-value for B73 x Mo17: '.0099475' χ2 p-value for Mo17 x B73: '.0000207' Biased in favor of strain: 'B73'
GRMZM2G069061	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.04 x 10^-4	360	267	408	298	57.42%	42.21%	627	706	RefGen V2	χ2 p-value for B73 x Mo17: '.000204' χ2 p-value for Mo17 x B73: '.0000347' Biased in favor of strain: 'B73'
GRMZM2G069024	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.371418 x 10^-1	87	53	57	49	62.14%	46.23%	140	106	RefGen V2	χ2 p-value for B73 x Mo17: '.0040592' χ2 p-value for Mo17 x B73: '.4371418' Biased in favor of strain: ''
GRMZM2G069024	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.26123 x 10^-1	31	11	21	4	73.81%	16.00%	42	25	RefGen V2	χ2 p-value for B73 x Mo17: '.326123' χ2 p-value for Mo17 x B73: '7.70e-08' Biased in favor of strain: ''
GRMZM2G069018	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.328513 x 10^-1	593	242	281	588	71.02%	67.66%	835	869	RefGen V2	χ2 p-value for B73 x Mo17: '.0076498' χ2 p-value for Mo17 x B73: '.5328513' Biased in favor of strain: ''
GRMZM2G069018	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.964019 x 10^-1	688	663	631	599	50.93%	48.70%	1351	1230	RefGen V2	χ2 p-value for B73 x Mo17: '.4964019' χ2 p-value for Mo17 x B73: '.3615448' Biased in favor of strain: ''
GRMZM2G069016	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.105184 x 10^-1	254	76	149	132	76.97%	46.98%	330	281	RefGen V2	χ2 p-value for B73 x Mo17: '1.14e-22' χ2 p-value for Mo17 x B73: '.3105184' Biased in favor of strain: ''
GRMZM2G069016	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1511	313	1132	796	82.84%	41.29%	1824	1928	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G069009	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.97848 x 10^-2	161	62	141	95	72.20%	40.25%	223	236	RefGen V2	χ2 p-value for B73 x Mo17: '.0797848' χ2 p-value for Mo17 x B73: '7.48e-18' Biased in favor of strain: ''
GRMZM2G069009	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.682459 x 10^-1	253	266	179	257	48.75%	58.94%	519	436	RefGen V2	χ2 p-value for B73 x Mo17: '.5682459' χ2 p-value for Mo17 x B73: '.0001873' Biased in favor of strain: ''
GRMZM2G069008	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		10	1	6	3	90.91%	33.33%	11	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0066556' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G069008	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	3	2	4	62.50%	66.67%	8	6	RefGen V2	χ2 p-value for B73 x Mo17: '.8025764' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM2G068989	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	5	0	17	0.00%	100.00%	5	17	RefGen V2	χ2 p-value for B73 x Mo17: '.0015653' χ2 p-value for Mo17 x B73: '.0035515' Biased in favor of strain: ''
GRMZM2G068989	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.33 x 10^-5	0	16	0	22	0.00%	100.00%	16	22	RefGen V2	χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '2.73e-06' Biased in favor of strain: 'Mo17'
GRMZM2G068984	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.704 x 10^-4	115	66	84	30	63.54%	26.32%	181	114	RefGen V2	χ2 p-value for B73 x Mo17: '.0002704' χ2 p-value for Mo17 x B73: '4.25e-07' Biased in favor of strain: 'B73'
GRMZM2G068984	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.539514 x 10^-1	40	19	45	31	67.80%	40.79%	59	76	RefGen V2	χ2 p-value for B73 x Mo17: '.8539514' χ2 p-value for Mo17 x B73: '1.71e-06' Biased in favor of strain: ''
GRMZM2G068982	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.838823 x 10^-1	19	0	6	9	100.00%	60.00%	19	15	RefGen V2	χ2 p-value for B73 x Mo17: '.0020548' χ2 p-value for Mo17 x B73: '.5838823' Biased in favor of strain: ''
GRMZM2G068982	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.38578 x 10^-1	9	6	15	2	60.00%	11.76%	15	17	RefGen V2	χ2 p-value for B73 x Mo17: '.438578' χ2 p-value for Mo17 x B73: '.0016162' Biased in favor of strain: ''
GRMZM2G068973	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.313639 x 10^-1	131	144	135	143	47.64%	51.44%	275	278	RefGen V2	χ2 p-value for B73 x Mo17: '.4330815' χ2 p-value for Mo17 x B73: '.6313639' Biased in favor of strain: ''
GRMZM2G068973	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	2.83 x 10^-9	435	334	612	574	56.57%	48.40%	769	1186	RefGen V2	χ2 p-value for B73 x Mo17: '2.83e-09' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G068967	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.15594 x 10^-2	44	9	25	13	83.02%	34.21%	53	38	RefGen V2	χ2 p-value for B73 x Mo17: '.0115594' χ2 p-value for Mo17 x B73: '.0000219' Biased in favor of strain: ''
GRMZM2G068967	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.13 x 10^-7	379	249	400	162	60.35%	28.83%	628	562	RefGen V2	χ2 p-value for B73 x Mo17: '2.13e-07' χ2 p-value for Mo17 x B73: '1.02e-23' Biased in favor of strain: 'B73'
GRMZM2G068963	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	2	6	5	66.67%	45.45%	6	11	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.7630246' Biased in favor of strain: ''
GRMZM2G068963	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	3	1	1	40.00%	50.00%	5	2	RefGen V2	χ2 p-value for B73 x Mo17: '.2058979' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: ''
GRMZM2G068955	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.69 x 10^-5	12	40	18	95	23.08%	84.07%	52	113	RefGen V2	χ2 p-value for B73 x Mo17: '2.59e-11' χ2 p-value for Mo17 x B73: '.0000869' Biased in favor of strain: 'Mo17'
GRMZM2G068955	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.4 x 10^-14	160	50	200	76	76.19%	27.54%	210	276	RefGen V2	χ2 p-value for B73 x Mo17: '3.18e-14' χ2 p-value for Mo17 x B73: '8.40e-14' Biased in favor of strain: 'B73'
GRMZM2G068952	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.8 x 10^-6	569	402	654	502	58.60%	43.43%	971	1156	RefGen V2	χ2 p-value for B73 x Mo17: '8.36e-08' χ2 p-value for Mo17 x B73: '7.80e-06' Biased in favor of strain: 'B73'
GRMZM2G068952	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.74902 x 10^-1	520	249	319	467	67.62%	59.41%	769	786	RefGen V2	χ2 p-value for B73 x Mo17: '.574902' χ2 p-value for Mo17 x B73: '.0000161' Biased in favor of strain: ''
GRMZM2G068943	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.6313 x 10^-3	144	84	186	130	63.16%	41.14%	228	316	RefGen V2	χ2 p-value for B73 x Mo17: '.0000708' χ2 p-value for Mo17 x B73: '.0016313' Biased in favor of strain: 'B73'
GRMZM2G068943	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.24714 x 10^-1	190	107	141	239	63.97%	62.89%	297	380	RefGen V2	χ2 p-value for B73 x Mo17: '.324714' χ2 p-value for Mo17 x B73: '.1188131' Biased in favor of strain: ''
GRMZM2G068936	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	1	4	100.00%	80.00%	1	5	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.5270893' Biased in favor of strain: ''
GRMZM2G068936	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.830914 x 10^-1	13	11	6	13	54.17%	68.42%	24	19	RefGen V2	χ2 p-value for B73 x Mo17: '.6830914' χ2 p-value for Mo17 x B73: '.1082937' Biased in favor of strain: ''
GRMZM2G068913	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.414372 x 10^-1	80	86	75	56	48.19%	42.75%	166	131	RefGen V2	χ2 p-value for B73 x Mo17: '.6414372' χ2 p-value for Mo17 x B73: '.0969069' Biased in favor of strain: ''
GRMZM2G068913	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.511293 x 10^-1	118	46	55	179	71.95%	76.50%	164	234	RefGen V2	χ2 p-value for B73 x Mo17: '.1511293' χ2 p-value for Mo17 x B73: '.0014251' Biased in favor of strain: ''
GRMZM2G068904	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	2	3	7	71.43%	70.00%	7	10	RefGen V2	χ2 p-value for B73 x Mo17: '.789277' χ2 p-value for Mo17 x B73: '.8230634' Biased in favor of strain: ''
GRMZM2G068904	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	4	0.00%	100.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G068862	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	4421	2131	3423	2164	67.48%	38.73%	6552	5587	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G068862	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	7172	1751	3385	3598	80.38%	51.53%	8923	6983	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G068826	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	4	1		20.00%	0	5	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G068826	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.316006 x 10^-1	16	18	7	11	47.06%	61.11%	34	18	RefGen V2	χ2 p-value for B73 x Mo17: '.7316006' χ2 p-value for Mo17 x B73: '.3457786' Biased in favor of strain: ''
GRMZM2G068808	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.45 x 10^-15	473	233	551	316	67.00%	36.45%	706	867	RefGen V2	χ2 p-value for B73 x Mo17: '1.68e-19' χ2 p-value for Mo17 x B73: '1.45e-15' Biased in favor of strain: 'B73'
GRMZM2G068808	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	4.277 x 10^-3	161	114	192	101	58.55%	34.47%	275	293	RefGen V2	χ2 p-value for B73 x Mo17: '.004277' χ2 p-value for Mo17 x B73: '1.42e-31' Biased in favor of strain: ''
GRMZM2G068789	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.77986 x 10^-2	135	104	89	139	56.49%	60.96%	239	228	RefGen V2	χ2 p-value for B73 x Mo17: '.0008407' χ2 p-value for Mo17 x B73: '.0677986' Biased in favor of strain: ''
GRMZM2G068789	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.62826 x 10^-2	272	223	211	172	54.95%	44.91%	495	383	RefGen V2	χ2 p-value for B73 x Mo17: '.027638' χ2 p-value for Mo17 x B73: '.0462826' Biased in favor of strain: 'B73'
GRMZM2G068715	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1501 x 10^-3	85	133	43	122	38.99%	73.94%	218	165	RefGen V2	χ2 p-value for B73 x Mo17: '.0011501' χ2 p-value for Mo17 x B73: '7.74e-10' Biased in favor of strain: 'Mo17'
GRMZM2G068715	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.99 x 10^-7	250	286	129	424	46.64%	76.67%	536	553	RefGen V2	χ2 p-value for B73 x Mo17: '7.97e-23' χ2 p-value for Mo17 x B73: '5.99e-07' Biased in favor of strain: 'Mo17'
GRMZM2G068714	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G068714	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	2	2	0	33.33%	0.00%	3	2	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G068710	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.218445 x 10^-1	501	413	469	466	54.81%	49.84%	914	935	RefGen V2	χ2 p-value for B73 x Mo17: '.0036053' χ2 p-value for Mo17 x B73: '.9218445' Biased in favor of strain: ''
GRMZM2G068710	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.823 x 10^-4	512	370	241	639	58.05%	72.61%	882	880	RefGen V2	χ2 p-value for B73 x Mo17: '5.68e-08' χ2 p-value for Mo17 x B73: '.0001823' Biased in favor of strain: 'Mo17'
GRMZM2G068701	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.319601 x 10^-1	20	14	8	26	58.82%	76.47%	34	34	RefGen V2	χ2 p-value for B73 x Mo17: '.3319601' χ2 p-value for Mo17 x B73: '.225253' Biased in favor of strain: ''
GRMZM2G068701	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.861428 x 10^-1	376	365	267	312	50.74%	53.89%	741	579	RefGen V2	χ2 p-value for B73 x Mo17: '.6861428' χ2 p-value for Mo17 x B73: '.0614649' Biased in favor of strain: ''
GRMZM2G068699	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	6	0	100.00%	0.00%	5	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G068699	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G068690	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	4	2	4	50.00%	66.67%	8	6	RefGen V2	χ2 p-value for B73 x Mo17: '.3173024' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM2G068690	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.888444 x 10^-1	19	13	20	9	59.38%	31.03%	32	29	RefGen V2	χ2 p-value for B73 x Mo17: '.2888444' χ2 p-value for Mo17 x B73: '.0410872' Biased in favor of strain: ''
GRMZM2G068657	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.04 x 10^-17	535	289	597	322	64.93%	35.04%	824	919	RefGen V2	χ2 p-value for B73 x Mo17: '1.04e-17' χ2 p-value for Mo17 x B73: '1.17e-19' Biased in favor of strain: 'B73'
GRMZM2G068657	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.196 x 10^-4	368	112	182	262	76.67%	59.01%	480	444	RefGen V2	χ2 p-value for B73 x Mo17: '3.36e-06' χ2 p-value for Mo17 x B73: '.0006196' Biased in favor of strain: 'B73'
GRMZM2G068639	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.43059 x 10^-2	0	33	0	12	0.00%	100.00%	33	12	RefGen V2	χ2 p-value for B73 x Mo17: '4.51e-16' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G068639	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.55003 x 10^-2	23	58	12	24	28.40%	66.67%	81	36	RefGen V2	χ2 p-value for B73 x Mo17: '.0001007' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: 'Mo17'
GRMZM2G068604	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.93464 x 10^-2	5	13	25	6	27.78%	19.35%	18	31	RefGen V2	χ2 p-value for B73 x Mo17: '.0593464' χ2 p-value for Mo17 x B73: '.0006437' Biased in favor of strain: ''
GRMZM2G068604	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G068590	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.18237 x 10^-2	93	33	88	140	73.81%	61.40%	126	228	RefGen V2	χ2 p-value for B73 x Mo17: '.0889819' χ2 p-value for Mo17 x B73: '.0918237' Biased in favor of strain: ''
GRMZM2G068590	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.35 x 10^-6	201	103	250	153	66.12%	37.97%	304	403	RefGen V2	χ2 p-value for B73 x Mo17: '1.90e-08' χ2 p-value for Mo17 x B73: '1.35e-06' Biased in favor of strain: 'B73'
GRMZM2G068575	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.89 x 10^-21	185	32	156	29	85.25%	15.68%	217	185	RefGen V2	χ2 p-value for B73 x Mo17: '2.86e-25' χ2 p-value for Mo17 x B73: '9.89e-21' Biased in favor of strain: 'B73'
GRMZM2G068575	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.7158 x 10^-3	120	20	76	101	85.71%	57.06%	140	177	RefGen V2	χ2 p-value for B73 x Mo17: '1.75e-06' χ2 p-value for Mo17 x B73: '.0067158' Biased in favor of strain: 'B73'
GRMZM2G068566	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.34 x 10^-16	2236	796	1312	1414	73.75%	51.87%	3032	2726	RefGen V2	χ2 p-value for B73 x Mo17: '1.34e-16' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G068566	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.5015 x 10^-2	626	371	375	435	62.79%	53.70%	997	810	RefGen V2	χ2 p-value for B73 x Mo17: '6.70e-16' χ2 p-value for Mo17 x B73: '.035015' Biased in favor of strain: ''
GRMZM2G068557	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.28919 x 10^-2	86	52	114	90	62.32%	44.12%	138	204	RefGen V2	χ2 p-value for B73 x Mo17: '.0038004' χ2 p-value for Mo17 x B73: '.0928919' Biased in favor of strain: ''
GRMZM2G068557	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	5	1	3	37.50%	75.00%	8	4	RefGen V2	χ2 p-value for B73 x Mo17: '.080115' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: ''
GRMZM2G068510	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G068510	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.6162 x 10^-3	15	2	13	1	88.24%	7.14%	17	14	RefGen V2	χ2 p-value for B73 x Mo17: '.0016162' χ2 p-value for Mo17 x B73: '.0013406' Biased in favor of strain: 'B73'
GRMZM2G068506	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.04 x 10^-12	1938	224	511	311	89.64%	37.83%	2162	822	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.04e-12' Biased in favor of strain: 'B73'
GRMZM2G068506	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	49347	9549	17487	20598	83.79%	54.08%	58896	38085	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G068489	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.896875 x 10^-1	17	9	15	15	65.38%	50.00%	26	30	RefGen V2	χ2 p-value for B73 x Mo17: '.8896875' χ2 p-value for Mo17 x B73: '.0528075' Biased in favor of strain: ''
GRMZM2G068489	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.752335 x 10^-1	18	12	13	8	60.00%	38.10%	30	21	RefGen V2	χ2 p-value for B73 x Mo17: '.2733217' χ2 p-value for Mo17 x B73: '.2752335' Biased in favor of strain: ''
GRMZM2G068479	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.328798 x 10^-1	153	183	202	183	45.54%	47.53%	336	385	RefGen V2	χ2 p-value for B73 x Mo17: '.1017069' χ2 p-value for Mo17 x B73: '.3328798' Biased in favor of strain: ''
GRMZM2G068479	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.012593 x 10^-1	195	118	127	188	62.30%	59.68%	313	315	RefGen V2	χ2 p-value for B73 x Mo17: '.1012593' χ2 p-value for Mo17 x B73: '.008551' Biased in favor of strain: ''
GRMZM2G068476	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.46 x 10^-8	219	46	110	86	82.64%	43.88%	265	196	RefGen V2	χ2 p-value for B73 x Mo17: '3.46e-08' χ2 p-value for Mo17 x B73: '1.31e-11' Biased in favor of strain: 'B73'
GRMZM2G068476	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.950765 x 10^-1	172	182	195	158	48.59%	44.76%	354	353	RefGen V2	χ2 p-value for B73 x Mo17: '.5950765' χ2 p-value for Mo17 x B73: '.0489174' Biased in favor of strain: ''

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