| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G22830 | MGT10 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22830 | MGT10 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '483.992' Avg. expression score in LCM sample: '208.269' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G22830 | MGT10 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '605.742' Avg. expression score in LCM sample: '208.269' Tissue used: 'full endosperm' |
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| AT5G22830 | MGT10 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1011.21' Avg. embryo expression (LCM): '1255.86' |
|||||
| AT5G22830 | MGT10 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22830 | MGT10 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22820 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.87901 x 10-1 | 18 | 9 | 66.67% | 27 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22820 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 7 | 2 | 0 | 1 | 77.78% | 100.00% | 9 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.805438' Avg. expression score for this sample: '15.9962' Avg. expression score in LCM sample: '14.0512' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G22820 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 7 | 4 | 5 | 12 | 63.64% | 70.59% | 11 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.805438' Avg. expression score for this sample: '18.5407' Avg. expression score in LCM sample: '14.0512' Tissue used: 'full endosperm' |
|||||
| AT5G22820 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 3 | 0 | 2 | 25.00% | 100.00% | 4 | 2 | TAIR8 |
Avg. embryo expression (dissected): '21.3849' Avg. embryo expression (LCM): '16.4392' |
||||
| AT5G22820 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.09132 x 10-1 | 2 | 3 | 40.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22820 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 23 | 9 | 71.88% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22810 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G22810 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '205.561' Avg. expression score in LCM sample: '10.2004' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT5G22810 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '226.36' Avg. expression score in LCM sample: '10.2004' Tissue used: 'full endosperm' |
|||||||
| AT5G22810 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '3441.3' Avg. embryo expression (LCM): '4177.06' |
||||||
| AT5G22810 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G22810 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G22800 | EMB1030 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.45 x 10-4 | 101 | 14 | 87.83% | 115 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G22800 | EMB1030 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.60744 x 10-1 | 10 | 5 | 6 | 4 | 66.67% | 40.00% | 15 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.488107' Avg. expression score for this sample: '42.3911' Avg. expression score in LCM sample: '21.8264' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT5G22800 | EMB1030 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.10542 x 10-1 | 44 | 13 | 27 | 65 | 77.19% | 70.65% | 57 | 92 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.488107' Avg. expression score for this sample: '102.232' Avg. expression score in LCM sample: '21.8264' Tissue used: 'full endosperm' |
||||
| AT5G22800 | EMB1030 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.91053 x 10-1 | 40 | 23 | 6 | 6 | 63.49% | 50.00% | 63 | 12 | TAIR8 |
Avg. embryo expression (dissected): '155.829' Avg. embryo expression (LCM): '191.807' |
|||
| AT5G22800 | EMB1030 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.70165 x 10-1 | 10 | 6 | 62.50% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G22800 | EMB1030 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.7153 x 10-2 | 109 | 70 | 60.89% | 179 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G22791 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.03012 x 10-1 | 29 | 16 | 64.44% | 45 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22791 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 1 | 1 | 4 | 0.00% | 80.00% | 1 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.640405' Avg. expression score for this sample: '5.47728' Avg. expression score in LCM sample: '28.9108' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G22791 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.54545 x 10-1 | 4 | 0 | 0 | 2 | 100.00% | 100.00% | 4 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.640405' Avg. expression score for this sample: '3.40177' Avg. expression score in LCM sample: '28.9108' Tissue used: 'full endosperm' |
|||||
| AT5G22791 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.219608' Avg. embryo expression (LCM): '0' |
|||||
| AT5G22791 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G22791 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.27669 x 10-1 | 187 | 103 | 64.48% | 290 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22790 | RER1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.37299 x 10-1 | 46 | 15 | 75.41% | 61 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G22790 | RER1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.87313 x 10-1 | 15 | 27 | 12 | 56 | 35.71% | 82.35% | 42 | 68 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.517981' Avg. expression score for this sample: '253.438' Avg. expression score in LCM sample: '139.807' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT5G22790 | RER1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.72214 x 10-1 | 40 | 16 | 27 | 77 | 71.43% | 74.04% | 56 | 104 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.517981' Avg. expression score for this sample: '162.103' Avg. expression score in LCM sample: '139.807' Tissue used: 'full endosperm' |
||||
| AT5G22790 | RER1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.45396 x 10-1 | 42 | 74 | 7 | 14 | 36.21% | 66.67% | 116 | 21 | TAIR8 |
Avg. embryo expression (dissected): '318.53' Avg. embryo expression (LCM): '270.675' |
|||
| AT5G22790 | RER1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.25639 x 10-1 | 13 | 7 | 65.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G22790 | RER1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.79537 x 10-1 | 94 | 34 | 73.44% | 128 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G22788 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G22788 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2.63936' Avg. expression score in LCM sample: '2.51334' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G22788 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '5.15457' Avg. expression score in LCM sample: '2.51334' Tissue used: 'full endosperm' |
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| AT5G22788 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.48629' Avg. embryo expression (LCM): '2.14752' |
||||||
| AT5G22788 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G22788 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G22780 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.20112 x 10-1 | 96 | 20 | 82.76% | 116 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22780 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.5523 x 10-1 | 22 | 12 | 11 | 54 | 64.71% | 83.08% | 34 | 65 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.01377' Avg. expression score for this sample: '170.965' Avg. expression score in LCM sample: '100.034' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G22780 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.547 x 10-2 | 31 | 15 | 21 | 89 | 67.39% | 80.91% | 46 | 110 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.01377' Avg. expression score for this sample: '203.499' Avg. expression score in LCM sample: '100.034' Tissue used: 'full endosperm' |
|||||
| AT5G22780 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 34 | 36 | 7 | 10 | 48.57% | 58.82% | 70 | 17 | TAIR8 |
Avg. embryo expression (dissected): '199.134' Avg. embryo expression (LCM): '176.008' |
||||
| AT5G22780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.46652 x 10-1 | 24 | 4 | 85.71% | 28 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.7081 x 10-2 | 76 | 12 | 86.36% | 88 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22770 | alpha-ADR | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.8 x 10-8 | 315 | 50 | 86.30% | 365 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G22770 | alpha-ADR | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.07252 x 10-1 | 46 | 21 | 45 | 56 | 68.66% | 55.45% | 67 | 101 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.179357' Avg. expression score for this sample: '154.236' Avg. expression score in LCM sample: '97.3737' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT5G22770 | alpha-ADR | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.012 | 122 | 35 | 50 | 141 | 77.71% | 73.82% | 157 | 191 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.179357' Avg. expression score for this sample: '203.599' Avg. expression score in LCM sample: '97.3737' Tissue used: 'full endosperm' |
||||
| AT5G22770 | alpha-ADR | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.47348 x 10-1 | 90 | 55 | 24 | 18 | 62.07% | 42.86% | 145 | 42 | TAIR8 |
Avg. embryo expression (dissected): '190.374' Avg. embryo expression (LCM): '168.536' |
|||
| AT5G22770 | alpha-ADR | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.44045 x 10-1 | 22 | 12 | 64.71% | 34 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G22770 | alpha-ADR | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.06965 x 10-1 | 201 | 72 | 73.63% | 273 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G22760 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.6 x 10-22 | 229 | 6 | 97.45% | 235 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.70019 x 10-1 | 30 | 12 | 24 | 35 | 71.43% | 59.32% | 42 | 59 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.699289' Avg. expression score for this sample: '122.052' Avg. expression score in LCM sample: '62.4367' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G22760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.68919 x 10-1 | 105 | 25 | 60 | 91 | 80.77% | 60.26% | 130 | 151 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.699289' Avg. expression score for this sample: '165.03' Avg. expression score in LCM sample: '62.4367' Tissue used: 'full endosperm' |
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| AT5G22760 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.27996 x 10-1 | 33 | 15 | 19 | 12 | 68.75% | 38.71% | 48 | 31 | TAIR8 |
Avg. embryo expression (dissected): '146.652' Avg. embryo expression (LCM): '71.0564' |
||||
| AT5G22760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.46905 x 10-1 | 36 | 19 | 65.45% | 55 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.06078 x 10-1 | 93 | 52 | 64.14% | 145 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22750 | RAD5 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 1 | 85.71% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G22750 | RAD5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 1 | 1 | 1 | 50.00% | 50.00% | 2 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '29.9482' Avg. expression score in LCM sample: '23.9576' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT5G22750 | RAD5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.23077 x 10-1 | 2 | 1 | 0 | 5 | 66.67% | 100.00% | 3 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '32.0728' Avg. expression score in LCM sample: '23.9576' Tissue used: 'full endosperm' |
||||
| AT5G22750 | RAD5 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 2 | 1 | 1 | 33.33% | 50.00% | 3 | 2 | TAIR8 |
Avg. embryo expression (dissected): '52.3875' Avg. embryo expression (LCM): '37.1357' |
|||
| AT5G22750 | RAD5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.05495 x 10-1 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G22750 | RAD5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.67468 x 10-1 | 3 | 5 | 37.50% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G22740 | CSLA02 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.5 x 10-10 | 256 | 36 | 87.67% | 292 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G22740 | CSLA02 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.29357 x 10-1 | 60 | 23 | 30 | 92 | 72.29% | 75.41% | 83 | 122 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.355347' Avg. expression score for this sample: '698.715' Avg. expression score in LCM sample: '928.57' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G22740 | CSLA02 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.45507 x 10-1 | 133 | 86 | 73 | 191 | 60.73% | 72.35% | 219 | 264 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.355347' Avg. expression score for this sample: '958.778' Avg. expression score in LCM sample: '928.57' Tissue used: 'full endosperm' |
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| AT5G22740 | CSLA02 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.34816 x 10-1 | 6 | 17 | 2 | 5 | 26.09% | 71.43% | 23 | 7 | TAIR8 |
Avg. embryo expression (dissected): '173.698' Avg. embryo expression (LCM): '95.2819' |
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| AT5G22740 | CSLA02 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.292 x 10-3 | 77 | 15 | 83.70% | 92 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G22740 | CSLA02 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.3 x 10-6 | 500 | 120 | 80.65% | 620 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G22730 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.892 x 10-3 | 112 | 20 | 84.85% | 132 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.37136 x 10-1 | 6 | 7 | 9 | 16 | 46.15% | 64.00% | 13 | 25 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.444302' Avg. expression score for this sample: '56.4837' Avg. expression score in LCM sample: '36.8624' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G22730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.6973 x 10-1 | 38 | 7 | 18 | 43 | 84.44% | 70.49% | 45 | 61 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.444302' Avg. expression score for this sample: '82.2551' Avg. expression score in LCM sample: '36.8624' Tissue used: 'full endosperm' |
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| AT5G22730 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.13605 x 10-1 | 14 | 17 | 2 | 2 | 45.16% | 50.00% | 31 | 4 | TAIR8 |
Avg. embryo expression (dissected): '60.2639' Avg. embryo expression (LCM): '69.8508' |
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| AT5G22730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.5237 x 10-1 | 13 | 10 | 56.52% | 23 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 69 | 27 | 71.88% | 96 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22720 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.444444' Avg. expression score for this sample: '.202379' Avg. expression score in LCM sample: '2.32227' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G22720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.44444 x 10-1 | 4 | 0 | 0 | 1 | 100.00% | 100.00% | 4 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.444444' Avg. expression score for this sample: '1.13151' Avg. expression score in LCM sample: '2.32227' Tissue used: 'full endosperm' |
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| AT5G22720 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT5G22720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G22720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 13 | 1 | 92.86% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22710 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.026 x 10-3 | 14 | 0 | 100.00% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.70917 x 10-1 | 2 | 7 | 7 | 11 | 22.22% | 61.11% | 9 | 18 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.519778' Avg. expression score for this sample: '14.1447' Avg. expression score in LCM sample: '8.12795' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G22710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 18 | 14 | 5 | 19 | 56.25% | 79.17% | 32 | 24 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.519778' Avg. expression score for this sample: '14.9341' Avg. expression score in LCM sample: '8.12795' Tissue used: 'full endosperm' |
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| AT5G22710 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.37986 x 10-1 | 3 | 11 | 0 | 4 | 21.43% | 100.00% | 14 | 4 | TAIR8 |
Avg. embryo expression (dissected): '14.8355' Avg. embryo expression (LCM): '12.9102' |
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| AT5G22710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.10012 x 10-1 | 8 | 2 | 80.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.44 x 10-4 | 22 | 0 | 100.00% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22700 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.796 x 10-2 | 19 | 2 | 90.48% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.64087 x 10-1 | 16 | 9 | 9 | 12 | 64.00% | 57.14% | 25 | 21 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.452704' Avg. expression score for this sample: '85.8663' Avg. expression score in LCM sample: '50.2669' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G22700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.616 x 10-2 | 19 | 6 | 5 | 28 | 76.00% | 84.85% | 25 | 33 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.452704' Avg. expression score for this sample: '96.4865' Avg. expression score in LCM sample: '50.2669' Tissue used: 'full endosperm' |
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| AT5G22700 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.81251 x 10-1 | 11 | 14 | 1 | 0 | 44.00% | 0.00% | 25 | 1 | TAIR8 |
Avg. embryo expression (dissected): '103.725' Avg. embryo expression (LCM): '57.2671' |
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| AT5G22700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.705 x 10-2 | 1 | 3 | 25.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.2287 x 10-2 | 28 | 3 | 90.32% | 31 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22690 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.6464 x 10-2 | 28 | 3 | 90.32% | 31 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G22690 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 5 | 1 | 0 | 0 | 83.33% | 6 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.812726' Avg. expression score for this sample: '11.6299' Avg. expression score in LCM sample: '7.31956' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G22690 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 13 | 0 | 11 | 11 | 100.00% | 50.00% | 13 | 22 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.812726' Avg. expression score for this sample: '30.8656' Avg. expression score in LCM sample: '7.31956' Tissue used: 'full endosperm' |
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| AT5G22690 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.46965 x 10-1 | 3 | 3 | 1 | 5 | 50.00% | 83.33% | 6 | 6 | TAIR8 |
Avg. embryo expression (dissected): '13.6521' Avg. embryo expression (LCM): '7.35933' |