GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G071294	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.289718 x 10^-1	47	38	30	56	55.29%	65.12%	85	86	RefGen V2	χ2 p-value for B73 x Mo17: '.3289718' χ2 p-value for Mo17 x B73: '.0050527' Biased in favor of strain: ''
GRMZM2G071294	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.643899 x 10^-1	75	47	54	116	61.48%	68.24%	122	170	RefGen V2	χ2 p-value for B73 x Mo17: '.22383' χ2 p-value for Mo17 x B73: '.6643899' Biased in favor of strain: ''
GRMZM2G071292	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	3	4		57.14%	0	7	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G071292	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	3	1	9	50.00%	90.00%	6	10	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.011412' Biased in favor of strain: ''
GRMZM2G071288	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.724473 x 10^-1	29	41	27	38	41.43%	58.46%	70	65	RefGen V2	χ2 p-value for B73 x Mo17: '.151494' χ2 p-value for Mo17 x B73: '.1724473' Biased in favor of strain: ''
GRMZM2G071288	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.070141 x 10^-1	17	22	19	50	43.59%	72.46%	39	69	RefGen V2	χ2 p-value for B73 x Mo17: '.0022342' χ2 p-value for Mo17 x B73: '.3070141' Biased in favor of strain: ''
GRMZM2G071277	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.142005 x 10^-1	16	11	11	12	59.26%	52.17%	27	23	RefGen V2	χ2 p-value for B73 x Mo17: '.4142005' χ2 p-value for Mo17 x B73: '.1403686' Biased in favor of strain: ''
GRMZM2G071277	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.7 x 10^-14	643	335	545	321	65.75%	37.07%	978	866	RefGen V2	χ2 p-value for B73 x Mo17: '6.94e-23' χ2 p-value for Mo17 x B73: '2.70e-14' Biased in favor of strain: 'B73'
GRMZM2G071272	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.041775 x 10^-1	34	35	24	17	49.28%	41.46%	69	41	RefGen V2	χ2 p-value for B73 x Mo17: '.9041775' χ2 p-value for Mo17 x B73: '.2742988' Biased in favor of strain: ''
GRMZM2G071272	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G071268	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.14 x 10^-26	638	112	487	232	85.07%	32.27%	750	719	RefGen V2	χ2 p-value for B73 x Mo17: '1.14e-26' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G071268	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.86 x 10^-21	532	198	409	182	72.88%	30.80%	730	591	RefGen V2	χ2 p-value for B73 x Mo17: '4.20e-35' χ2 p-value for Mo17 x B73: '9.86e-21' Biased in favor of strain: 'B73'
GRMZM2G071264	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.9 x 10^-11	10	69	6	59	12.66%	90.77%	79	65	RefGen V2	χ2 p-value for B73 x Mo17: '3.18e-11' χ2 p-value for Mo17 x B73: '4.90e-11' Biased in favor of strain: 'Mo17'
GRMZM2G071264	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.28 x 10^-9	3	36	2	81	7.69%	97.59%	39	83	RefGen V2	χ2 p-value for B73 x Mo17: '5.59e-15' χ2 p-value for Mo17 x B73: '2.28e-09' Biased in favor of strain: 'Mo17'
GRMZM2G071253	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.192538 x 10^-1	228	117	151	189	66.09%	55.59%	345	340	RefGen V2	χ2 p-value for B73 x Mo17: '.8192538' χ2 p-value for Mo17 x B73: '.0000147' Biased in favor of strain: ''
GRMZM2G071253	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.0373 x 10^-3	147	198	97	170	42.61%	63.67%	345	267	RefGen V2	χ2 p-value for B73 x Mo17: '.0060373' χ2 p-value for Mo17 x B73: '7.91e-06' Biased in favor of strain: 'Mo17'
GRMZM2G071249	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.272594 x 10^-1	9	5	10	11	64.29%	52.38%	14	21	RefGen V2	χ2 p-value for B73 x Mo17: '.2850494' χ2 p-value for Mo17 x B73: '.8272594' Biased in favor of strain: ''
GRMZM2G071249	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.062556 x 10^-1	22	22	31	57	50.00%	64.77%	44	88	RefGen V2	χ2 p-value for B73 x Mo17: '.0190145' χ2 p-value for Mo17 x B73: '.7062556' Biased in favor of strain: ''
GRMZM2G071223	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	1	5	50.00%	83.33%	2	6	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.3864763' Biased in favor of strain: ''
GRMZM2G071223	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.0282 x 10^-3	11	31	3	57	26.19%	95.00%	42	60	RefGen V2	χ2 p-value for B73 x Mo17: '.0020282' χ2 p-value for Mo17 x B73: '3.14e-12' Biased in favor of strain: 'Mo17'
GRMZM2G071206	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		11	0	5	0	100.00%	0.00%	11	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0009111' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM2G071206	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	3	0	100.00%	0.00%	3	3	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G071172	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.0 x 10^-30	407	34	317	134	92.29%	29.71%	441	451	RefGen V2	χ2 p-value for B73 x Mo17: '3.53e-30' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G071172	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.16 x 10^-7	280	132	220	122	67.96%	35.67%	412	342	RefGen V2	χ2 p-value for B73 x Mo17: '3.07e-13' χ2 p-value for Mo17 x B73: '1.16e-07' Biased in favor of strain: 'B73'
GRMZM2G071163	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.47 x 10^-5	1187	815	938	764	59.29%	44.89%	2002	1702	RefGen V2	χ2 p-value for B73 x Mo17: '9.25e-17' χ2 p-value for Mo17 x B73: '.0000247' Biased in favor of strain: 'B73'
GRMZM2G071163	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.311093 x 10^-1	481	234	314	516	67.27%	62.17%	715	830	RefGen V2	χ2 p-value for B73 x Mo17: '.7311093' χ2 p-value for Mo17 x B73: '.005979' Biased in favor of strain: ''
GRMZM2G071162	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.2347 x 10^-3	35	4	27	23	89.74%	46.00%	39	50	RefGen V2	χ2 p-value for B73 x Mo17: '.0022347' χ2 p-value for Mo17 x B73: '.0019352' Biased in favor of strain: 'B73'
GRMZM2G071162	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5688 x 10^-3	68	108	31	88	38.64%	73.95%	176	119	RefGen V2	χ2 p-value for B73 x Mo17: '.0025688' χ2 p-value for Mo17 x B73: '1.74e-07' Biased in favor of strain: 'Mo17'
GRMZM2G071157	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G071157	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	1	14	3	85.71%	17.65%	7	17	RefGen V2	χ2 p-value for B73 x Mo17: '.0587817' χ2 p-value for Mo17 x B73: '.0076329' Biased in favor of strain: ''
GRMZM2G071154	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.25753 x 10^-1	419	405	197	285	50.85%	59.13%	824	482	RefGen V2	χ2 p-value for B73 x Mo17: '.625753' χ2 p-value for Mo17 x B73: '.0000612' Biased in favor of strain: ''
GRMZM2G071154	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.181 x 10^-3	266	92	204	298	74.30%	59.36%	358	502	RefGen V2	χ2 p-value for B73 x Mo17: '.002181' χ2 p-value for Mo17 x B73: '.0005174' Biased in favor of strain: 'B73'
GRMZM2G071147	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.17 x 10^-8	459	135	261	272	77.27%	51.03%	594	533	RefGen V2	χ2 p-value for B73 x Mo17: '4.17e-08' χ2 p-value for Mo17 x B73: '1.90e-14' Biased in favor of strain: 'B73'
GRMZM2G071147	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.35 x 10^-8	300	107	168	82	73.71%	32.80%	407	250	RefGen V2	χ2 p-value for B73 x Mo17: '1.10e-21' χ2 p-value for Mo17 x B73: '5.35e-08' Biased in favor of strain: 'B73'
GRMZM2G071113	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.73 x 10^-7	363	201	365	241	64.36%	39.77%	564	606	RefGen V2	χ2 p-value for B73 x Mo17: '9.01e-12' χ2 p-value for Mo17 x B73: '4.73e-07' Biased in favor of strain: 'B73'
GRMZM2G071113	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.502 x 10^-4	308	105	200	242	74.58%	54.75%	413	442	RefGen V2	χ2 p-value for B73 x Mo17: '.0006502' χ2 p-value for Mo17 x B73: '1.07e-07' Biased in favor of strain: 'B73'
GRMZM2G071112	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	3	0	0	40.00%		5	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G071112	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.77796 x 10^-2	21	6	8	2	77.78%	20.00%	27	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0038924' χ2 p-value for Mo17 x B73: '.0577796' Biased in favor of strain: ''
GRMZM2G071100	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	8	1	4	38.46%	80.00%	13	5	RefGen V2	χ2 p-value for B73 x Mo17: '.4053805' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G071100	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	2		100.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G071087	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.074096 x 10^-1	91	65	63	160	58.33%	71.75%	156	223	RefGen V2	χ2 p-value for B73 x Mo17: '.0272438' χ2 p-value for Mo17 x B73: '.1074096' Biased in favor of strain: ''
GRMZM2G071087	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.582994 x 10^-1	75	68	73	62	52.45%	45.93%	143	135	RefGen V2	χ2 p-value for B73 x Mo17: '.5582994' χ2 p-value for Mo17 x B73: '.3437768' Biased in favor of strain: ''
GRMZM2G071076	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.2347 x 10^-3	63	34	14	51	64.95%	78.46%	97	65	RefGen V2	χ2 p-value for B73 x Mo17: '.0032347' χ2 p-value for Mo17 x B73: '4.45e-06' Biased in favor of strain: ''
GRMZM2G071076	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.391291 x 10^-1	257	142	78	195	64.41%	71.43%	399	273	RefGen V2	χ2 p-value for B73 x Mo17: '.3391291' χ2 p-value for Mo17 x B73: '.0951084' Biased in favor of strain: ''
GRMZM2G071071	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.80252 x 10^-2	705	308	399	575	69.60%	59.03%	1013	974	RefGen V2	χ2 p-value for B73 x Mo17: '.0480252' χ2 p-value for Mo17 x B73: '4.36e-07' Biased in favor of strain: ''
GRMZM2G071071	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.114 x 10^-4	632	438	458	360	59.07%	44.01%	1070	818	RefGen V2	χ2 p-value for B73 x Mo17: '3.02e-09' χ2 p-value for Mo17 x B73: '.0006114' Biased in favor of strain: 'B73'
GRMZM2G071059	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.142162 x 10^-1	80	70	49	61	53.33%	55.45%	150	110	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.2525593' Biased in favor of strain: ''
GRMZM2G071059	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.864397 x 10^-1	66	32	51	77	67.35%	60.16%	98	128	RefGen V2	χ2 p-value for B73 x Mo17: '.8864397' χ2 p-value for Mo17 x B73: '.1181701' Biased in favor of strain: ''
GRMZM2G071034	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G071034	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	4	0	100.00%	0.00%	1	4	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G071025	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.1578 x 10^-3	164	118	129	77	58.16%	37.38%	282	206	RefGen V2	χ2 p-value for B73 x Mo17: '.0061578' χ2 p-value for Mo17 x B73: '.0002912' Biased in favor of strain: 'B73'
GRMZM2G071025	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.5435 x 10^-3	69	16	38	33	81.18%	46.48%	85	71	RefGen V2	χ2 p-value for B73 x Mo17: '.0045435' χ2 p-value for Mo17 x B73: '.000308' Biased in favor of strain: 'B73'
GRMZM2G071021	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.03828 x 10^-2	119	0	3	21	100.00%	87.50%	119	24	RefGen V2	χ2 p-value for B73 x Mo17: '1.22e-14' χ2 p-value for Mo17 x B73: '.0303828' Biased in favor of strain: ''
GRMZM2G071021	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2336	506	2560	475	82.20%	15.65%	2842	3035	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G071015	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.13 x 10^-13	164	57	117	17	74.21%	12.69%	221	134	RefGen V2	χ2 p-value for B73 x Mo17: '6.13e-13' χ2 p-value for Mo17 x B73: '5.69e-18' Biased in favor of strain: 'B73'
GRMZM2G071015	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.10495 x 10^-2	83	23	80	49	78.30%	37.98%	106	129	RefGen V2	χ2 p-value for B73 x Mo17: '.0110495' χ2 p-value for Mo17 x B73: '4.83e-12' Biased in favor of strain: ''
GRMZM2G071010	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1023	16	550	60	98.46%	9.84%	1039	610	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G071010	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	721	11	568	3	98.50%	0.53%	732	571	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G070978	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	5	4	83.33%	44.44%	6	9	RefGen V2	χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: ''
GRMZM2G070978	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		14	1	0	0	93.33%		15	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G070943	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	1	100.00%	100.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G070943	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	6	5	6	14.29%	54.55%	7	11	RefGen V2	χ2 p-value for B73 x Mo17: '.0587817' χ2 p-value for Mo17 x B73: '.7630246' Biased in favor of strain: ''
GRMZM2G070912	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	2		50.00%	0	4	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G070912	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	0	0	100.00%		4	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G070899	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.59 x 10^-11	206	32	129	57	86.55%	30.65%	238	186	RefGen V2	χ2 p-value for B73 x Mo17: '7.59e-11' χ2 p-value for Mo17 x B73: '1.98e-25' Biased in favor of strain: 'B73'
GRMZM2G070899	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.93 x 10^-15	191	24	124	27	88.84%	17.88%	215	151	RefGen V2	χ2 p-value for B73 x Mo17: '4.73e-30' χ2 p-value for Mo17 x B73: '2.93e-15' Biased in favor of strain: 'B73'
GRMZM2G070898	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.388827 x 10^-1	19	17	14	8	52.78%	36.36%	36	22	RefGen V2	χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.2008251' Biased in favor of strain: ''
GRMZM2G070898	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.596839 x 10^-1	8	2	5	11	80.00%	68.75%	10	16	RefGen V2	χ2 p-value for B73 x Mo17: '.3710998' χ2 p-value for Mo17 x B73: '.8596839' Biased in favor of strain: ''
GRMZM2G070890	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.19 x 10^-17	879	230	535	663	79.26%	55.34%	1109	1198	RefGen V2	χ2 p-value for B73 x Mo17: '5.76e-19' χ2 p-value for Mo17 x B73: '9.19e-17' Biased in favor of strain: 'B73'
GRMZM2G070890	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.79 x 10^-16	629	369	518	286	63.03%	35.57%	998	804	RefGen V2	χ2 p-value for B73 x Mo17: '1.87e-16' χ2 p-value for Mo17 x B73: '2.79e-16' Biased in favor of strain: 'B73'
GRMZM2G070885	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.773916 x 10^-1	107	101	101	90	51.44%	47.12%	208	191	RefGen V2	χ2 p-value for B73 x Mo17: '.6773916' χ2 p-value for Mo17 x B73: '.4260715' Biased in favor of strain: ''
GRMZM2G070885	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.92379 x 10^-2	84	62	36	139	57.53%	79.43%	146	175	RefGen V2	χ2 p-value for B73 x Mo17: '.0192379' χ2 p-value for Mo17 x B73: '.0003419' Biased in favor of strain: ''
GRMZM2G070881	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.642027 x 10^-1	162	69	157	85	70.13%	35.12%	231	242	RefGen V2	χ2 p-value for B73 x Mo17: '.2642027' χ2 p-value for Mo17 x B73: '2.25e-25' Biased in favor of strain: ''
GRMZM2G070881	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.5563 x 10^-3	88	32	55	29	73.33%	34.52%	120	84	RefGen V2	χ2 p-value for B73 x Mo17: '3.19e-07' χ2 p-value for Mo17 x B73: '.0045563' Biased in favor of strain: 'B73'
GRMZM2G070849	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.266305 x 10^-1	5	14	7	14	26.32%	66.67%	19	21	RefGen V2	χ2 p-value for B73 x Mo17: '.0389475' χ2 p-value for Mo17 x B73: '.1266305' Biased in favor of strain: ''
GRMZM2G070849	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	5	2	21	28.57%	91.30%	7	23	RefGen V2	χ2 p-value for B73 x Mo17: '.0325079' χ2 p-value for Mo17 x B73: '.0121929' Biased in favor of strain: ''
GRMZM2G070807	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.97 x 10^-8	1883	746	795	1232	71.62%	60.78%	2629	2027	RefGen V2	χ2 p-value for B73 x Mo17: '6.97e-08' χ2 p-value for Mo17 x B73: '1.88e-08' Biased in favor of strain: 'B73'
GRMZM2G070807	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.81 x 10^-8	1253	990	1399	1071	55.86%	43.36%	2243	2470	RefGen V2	χ2 p-value for B73 x Mo17: '2.81e-08' χ2 p-value for Mo17 x B73: '4.12e-11' Biased in favor of strain: 'B73'
GRMZM2G070804	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.33564 x 10^-2	487	360	368	309	57.50%	45.64%	847	677	RefGen V2	χ2 p-value for B73 x Mo17: '.0000128' χ2 p-value for Mo17 x B73: '.0233564' Biased in favor of strain: 'B73'
GRMZM2G070804	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.99 x 10^-6	167	38	151	109	81.46%	41.92%	205	260	RefGen V2	χ2 p-value for B73 x Mo17: '6.99e-06' χ2 p-value for Mo17 x B73: '2.59e-17' Biased in favor of strain: 'B73'
GRMZM2G070780	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.600293 x 10^-1	363	131	117	226	73.48%	65.89%	494	343	RefGen V2	χ2 p-value for B73 x Mo17: '.0013129' χ2 p-value for Mo17 x B73: '.7600293' Biased in favor of strain: ''
GRMZM2G070780	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.63945 x 10^-2	107	58	50	72	64.85%	59.02%	165	122	RefGen V2	χ2 p-value for B73 x Mo17: '.0001364' χ2 p-value for Mo17 x B73: '.0463945' Biased in favor of strain: ''
GRMZM2G070765	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.616 x 10^-4	97	54	89	49	64.24%	35.51%	151	138	RefGen V2	χ2 p-value for B73 x Mo17: '.0004665' χ2 p-value for Mo17 x B73: '.0006616' Biased in favor of strain: 'B73'
GRMZM2G070765	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.812762 x 10^-1	114	26	40	61	81.43%	60.40%	140	101	RefGen V2	χ2 p-value for B73 x Mo17: '.0002113' χ2 p-value for Mo17 x B73: '.1812762' Biased in favor of strain: ''
GRMZM2G070723	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.35866 x 10^-2	187	45	54	74	80.60%	57.81%	232	128	RefGen V2	χ2 p-value for B73 x Mo17: '6.70e-06' χ2 p-value for Mo17 x B73: '.0335866' Biased in favor of strain: ''
GRMZM2G070723	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.6494 x 10^-3	59	32	49	23	64.84%	31.94%	91	72	RefGen V2	χ2 p-value for B73 x Mo17: '.0046494' χ2 p-value for Mo17 x B73: '.002183' Biased in favor of strain: 'B73'
GRMZM2G070716	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.457786 x 10^-1	4	15	7	11	21.05%	61.11%	19	18	RefGen V2	χ2 p-value for B73 x Mo17: '.0116169' χ2 p-value for Mo17 x B73: '.3457786' Biased in favor of strain: ''
GRMZM2G070716	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	4	1	5	63.64%	83.33%	11	6	RefGen V2	χ2 p-value for B73 x Mo17: '.8311576' χ2 p-value for Mo17 x B73: '.3864763' Biased in favor of strain: ''
GRMZM2G070713	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	4	0.00%	100.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G070713	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	8	0.00%	100.00%	1	8	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G070708	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	6	10	66.67%	62.50%	3	16	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G070708	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	0	11	50.00%	100.00%	2	11	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.0190165' Biased in favor of strain: ''
GRMZM2G070693	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.650053 x 10^-1	20	0	9	15	100.00%	62.50%	20	24	RefGen V2	χ2 p-value for B73 x Mo17: '.0015655' χ2 p-value for Mo17 x B73: '.6650053' Biased in favor of strain: ''
GRMZM2G070693	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.4264 x 10^-2	19	8	13	3	70.37%	18.75%	27	16	RefGen V2	χ2 p-value for B73 x Mo17: '.034264' χ2 p-value for Mo17 x B73: '.0124193' Biased in favor of strain: 'B73'
GRMZM2G070673	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.2563 x 10^-3	46	21	84	16	68.66%	16.00%	67	100	RefGen V2	χ2 p-value for B73 x Mo17: '.0022563' χ2 p-value for Mo17 x B73: '1.05e-11' Biased in favor of strain: 'B73'
GRMZM2G070673	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	1	27	2	85.71%	6.90%	7	29	RefGen V2	χ2 p-value for B73 x Mo17: '.2850535' χ2 p-value for Mo17 x B73: '8.61e-12' Biased in favor of strain: ''
GRMZM2G070659	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		17	0	4	0	100.00%	0.00%	17	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0035516' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G070659	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	16	16	24	12	50.00%	33.33%	32	36	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G070639	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.69 x 10^-6	453	258	319	209	63.71%	39.58%	711	528	RefGen V2	χ2 p-value for B73 x Mo17: '2.61e-13' χ2 p-value for Mo17 x B73: '1.69e-06' Biased in favor of strain: 'B73'
GRMZM2G070639	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.22 x 10^-5	52	4	37	2	92.86%	5.13%	56	39	RefGen V2	χ2 p-value for B73 x Mo17: '.0000322' χ2 p-value for Mo17 x B73: '3.57e-16' Biased in favor of strain: 'B73'

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