GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G071996	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.92207 x 10^-1	24	29	14	34	45.28%	70.83%	53	48	RefGen V2	χ2 p-value for B73 x Mo17: '.492207' χ2 p-value for Mo17 x B73: '.0038924' Biased in favor of strain: ''
GRMZM2G071996	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.447043 x 10^-1	5	11	3	11	31.25%	78.57%	16	14	RefGen V2	χ2 p-value for B73 x Mo17: '.0026538' χ2 p-value for Mo17 x B73: '.3447043' Biased in favor of strain: ''
GRMZM2G071987	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.425875 x 10^-1	134	69	91	202	66.01%	68.94%	203	293	RefGen V2	χ2 p-value for B73 x Mo17: '.8425875' χ2 p-value for Mo17 x B73: '.4086954' Biased in favor of strain: ''
GRMZM2G071987	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.715391 x 10^-1	29	38	20	28	43.28%	58.33%	67	48	RefGen V2	χ2 p-value for B73 x Mo17: '.2715391' χ2 p-value for Mo17 x B73: '.2482131' Biased in favor of strain: ''
GRMZM2G071977	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	58	58	28	58	50.00%	67.44%	116	86	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0012165' Biased in favor of strain: ''
GRMZM2G071977	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.294403 x 10^-1	113	61	72	64	64.94%	47.06%	174	136	RefGen V2	χ2 p-value for B73 x Mo17: '.6294403' χ2 p-value for Mo17 x B73: '1.23e-06' Biased in favor of strain: ''
GRMZM2G071970	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.26 x 10^-15	824	231	582	641	78.10%	52.41%	1055	1223	RefGen V2	χ2 p-value for B73 x Mo17: '3.26e-15' χ2 p-value for Mo17 x B73: '3.90e-26' Biased in favor of strain: 'B73'
GRMZM2G071970	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.804 x 10^-4	486	240	319	241	66.94%	43.04%	726	560	RefGen V2	χ2 p-value for B73 x Mo17: '6.86e-20' χ2 p-value for Mo17 x B73: '.0009804' Biased in favor of strain: 'B73'
GRMZM2G071907	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.095986 x 10^-1	58	42	47	68	58.00%	59.13%	100	115	RefGen V2	χ2 p-value for B73 x Mo17: '.1095986' χ2 p-value for Mo17 x B73: '.0501995' Biased in favor of strain: ''
GRMZM2G071907	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.798541 x 10^-1	73	25	55	105	74.49%	65.62%	98	160	RefGen V2	χ2 p-value for B73 x Mo17: '.1004211' χ2 p-value for Mo17 x B73: '.7798541' Biased in favor of strain: ''
GRMZM2G071883	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.808998 x 10^-1	32	11	41	38	74.42%	48.10%	43	79	RefGen V2	χ2 p-value for B73 x Mo17: '.2808998' χ2 p-value for Mo17 x B73: '.0004645' Biased in favor of strain: ''
GRMZM2G071883	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.457786 x 10^-1	11	7	18	8	61.11%	30.77%	18	26	RefGen V2	χ2 p-value for B73 x Mo17: '.3457786' χ2 p-value for Mo17 x B73: '.0498602' Biased in favor of strain: ''
GRMZM2G071877	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.170751 x 10^-1	9	15	9	7	37.50%	43.75%	24	16	RefGen V2	χ2 p-value for B73 x Mo17: '.2206714' χ2 p-value for Mo17 x B73: '.6170751' Biased in favor of strain: ''
GRMZM2G071877	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	5	6	80.00%	54.55%	5	11	RefGen V2	χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.3937685' Biased in favor of strain: ''
GRMZM2G071869	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.29844 x 10^-2	82	23	60	48	78.10%	44.44%	105	108	RefGen V2	χ2 p-value for B73 x Mo17: '.0129844' χ2 p-value for Mo17 x B73: '9.63e-07' Biased in favor of strain: ''
GRMZM2G071869	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.3158 x 10^-3	40	17	49	20	70.18%	28.99%	57	69	RefGen V2	χ2 p-value for B73 x Mo17: '.0023158' χ2 p-value for Mo17 x B73: '.0004809' Biased in favor of strain: 'B73'
GRMZM2G071844	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.476603 x 10^-1	332	185	201	173	64.22%	46.26%	517	374	RefGen V2	χ2 p-value for B73 x Mo17: '1.01e-10' χ2 p-value for Mo17 x B73: '.1476603' Biased in favor of strain: ''
GRMZM2G071844	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.23 x 10^-17	680	167	332	309	80.28%	48.21%	847	641	RefGen V2	χ2 p-value for B73 x Mo17: '4.23e-17' χ2 p-value for Mo17 x B73: '3.59e-23' Biased in favor of strain: 'B73'
GRMZM2G071832	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G071832	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	9	0.00%	100.00%	3	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: ''
GRMZM2G071808	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		39	0	0	0	100.00%		39	0	RefGen V2	χ2 p-value for B73 x Mo17: '4.24e-10' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G071808	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		215	0	0	0	100.00%		215	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G071790	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.18 x 10^-17	179	7	108	28	96.24%	20.59%	186	136	RefGen V2	χ2 p-value for B73 x Mo17: '1.18e-17' χ2 p-value for Mo17 x B73: '4.22e-30' Biased in favor of strain: 'B73'
GRMZM2G071790	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	474	44	453	36	91.51%	7.36%	518	489	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G071768	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.960176 x 10^-1	219	200	164	157	52.27%	48.91%	419	321	RefGen V2	χ2 p-value for B73 x Mo17: '.3532983' χ2 p-value for Mo17 x B73: '.6960176' Biased in favor of strain: ''
GRMZM2G071768	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.444882 x 10^-1	406	229	281	358	63.94%	56.03%	635	639	RefGen V2	χ2 p-value for B73 x Mo17: '.1444882' χ2 p-value for Mo17 x B73: '1.15e-08' Biased in favor of strain: ''
GRMZM2G071750	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	2		66.67%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G071750	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	3	0	3	70.00%	100.00%	10	3	RefGen V2	χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G071745	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.49156 x 10^-2	134	97	130	93	58.01%	41.70%	231	223	RefGen V2	χ2 p-value for B73 x Mo17: '.0149156' χ2 p-value for Mo17 x B73: '.0132231' Biased in favor of strain: 'B73'
GRMZM2G071745	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.08 x 10^-5	203	48	114	135	80.88%	54.22%	251	249	RefGen V2	χ2 p-value for B73 x Mo17: '1.79e-06' χ2 p-value for Mo17 x B73: '.0000308' Biased in favor of strain: 'B73'
GRMZM2G071744	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G071744	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	2	4	4	75.00%	50.00%	8	8	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G071739	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.772089 x 10^-1	362	429	318	346	45.76%	52.11%	791	664	RefGen V2	χ2 p-value for B73 x Mo17: '.0172074' χ2 p-value for Mo17 x B73: '.2772089' Biased in favor of strain: ''
GRMZM2G071739	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.868402 x 10^-1	149	73	95	128	67.12%	57.40%	222	223	RefGen V2	χ2 p-value for B73 x Mo17: '.8868402' χ2 p-value for Mo17 x B73: '.003327' Biased in favor of strain: ''
GRMZM2G071714	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.240591 x 10^-1	198	150	113	243	56.90%	68.26%	348	356	RefGen V2	χ2 p-value for B73 x Mo17: '.0001105' χ2 p-value for Mo17 x B73: '.5240591' Biased in favor of strain: ''
GRMZM2G071714	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.35 x 10^-15	538	307	535	308	63.67%	36.54%	845	843	RefGen V2	χ2 p-value for B73 x Mo17: '1.92e-15' χ2 p-value for Mo17 x B73: '5.35e-15' Biased in favor of strain: 'B73'
GRMZM2G071705	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.394982 x 10^-1	81	89	82	62	47.65%	43.06%	170	144	RefGen V2	χ2 p-value for B73 x Mo17: '.5394982' χ2 p-value for Mo17 x B73: '.0955807' Biased in favor of strain: ''
GRMZM2G071705	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.942659 x 10^-1	38	25	22	33	60.32%	60.00%	63	55	RefGen V2	χ2 p-value for B73 x Mo17: '.2850309' χ2 p-value for Mo17 x B73: '.2942659' Biased in favor of strain: ''
GRMZM2G071704	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	0	0	7	100.00%	100.00%	8	7	RefGen V2	χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.0613688' Biased in favor of strain: ''
GRMZM2G071704	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	6	4	4	50.00%	50.00%	12	8	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G071688	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.457786 x 10^-1	12	3	11	7	80.00%	38.89%	15	18	RefGen V2	χ2 p-value for B73 x Mo17: '.0201368' χ2 p-value for Mo17 x B73: '.3457786' Biased in favor of strain: ''
GRMZM2G071688	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	0	0	100.00%		4	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G071675	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.90843 x 10^-1	151	62	104	113	70.89%	52.07%	213	217	RefGen V2	χ2 p-value for B73 x Mo17: '.190843' χ2 p-value for Mo17 x B73: '5.11e-06' Biased in favor of strain: ''
GRMZM2G071675	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.170771 x 10^-1	66	57	52	32	53.66%	38.10%	123	84	RefGen V2	χ2 p-value for B73 x Mo17: '.4170771' χ2 p-value for Mo17 x B73: '.0290963' Biased in favor of strain: ''
GRMZM2G071659	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.061165 x 10^-1	62	19	39	32	76.54%	45.07%	81	71	RefGen V2	χ2 p-value for B73 x Mo17: '1.77e-06' χ2 p-value for Mo17 x B73: '.4061165' Biased in favor of strain: ''
GRMZM2G071659	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.013 x 10^-4	171	49	119	122	77.73%	50.62%	220	241	RefGen V2	χ2 p-value for B73 x Mo17: '.0005013' χ2 p-value for Mo17 x B73: '1.27e-07' Biased in favor of strain: 'B73'
GRMZM2G071638	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.794633 x 10^-1	92	52	67	56	63.89%	45.53%	144	123	RefGen V2	χ2 p-value for B73 x Mo17: '.4794633' χ2 p-value for Mo17 x B73: '6.59e-07' Biased in favor of strain: ''
GRMZM2G071638	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.74 x 10^-7	121	30	88	31	80.13%	26.05%	151	119	RefGen V2	χ2 p-value for B73 x Mo17: '1.31e-13' χ2 p-value for Mo17 x B73: '1.74e-07' Biased in favor of strain: 'B73'
GRMZM2G071630	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G071630	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	3	0	100.00%	0.00%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G071626	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.464937 x 10^-1	5	7	6	16	41.67%	72.73%	12	22	RefGen V2	χ2 p-value for B73 x Mo17: '.0661893' χ2 p-value for Mo17 x B73: '.5464937' Biased in favor of strain: ''
GRMZM2G071626	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.083652 x 10^-1	9	8	9	5	52.94%	35.71%	17	14	RefGen V2	χ2 p-value for B73 x Mo17: '.8083652' χ2 p-value for Mo17 x B73: '.2850494' Biased in favor of strain: ''
GRMZM2G071602	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	0	0	80.00%		5	0	RefGen V2	χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G071602	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		30	0	0	6	100.00%	100.00%	30	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0001075' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G071589	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999992 x 10^-1	186	138	102	204	57.41%	66.67%	324	306	RefGen V2	χ2 p-value for B73 x Mo17: '.0004068' χ2 p-value for Mo17 x B73: '.9999992' Biased in favor of strain: ''
GRMZM2G071589	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.078113 x 10^-1	379	336	247	300	53.01%	54.84%	715	547	RefGen V2	χ2 p-value for B73 x Mo17: '.1078113' χ2 p-value for Mo17 x B73: '.0234443' Biased in favor of strain: ''
GRMZM2G071582	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.13 x 10^-6	77	29	71	22	72.64%	23.66%	106	93	RefGen V2	χ2 p-value for B73 x Mo17: '3.13e-06' χ2 p-value for Mo17 x B73: '3.75e-07' Biased in favor of strain: 'B73'
GRMZM2G071582	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.04432 x 10^-2	68	54	67	65	55.74%	49.24%	122	132	RefGen V2	χ2 p-value for B73 x Mo17: '.0104432' χ2 p-value for Mo17 x B73: '.0000217' Biased in favor of strain: ''
GRMZM2G071573	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.971598 x 10^-1	34	12	21	29	73.91%	58.00%	46	50	RefGen V2	χ2 p-value for B73 x Mo17: '.2971598' χ2 p-value for Mo17 x B73: '.1936008' Biased in favor of strain: ''
GRMZM2G071573	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		17	2	5	2	89.47%	28.57%	19	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0005791' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: ''
GRMZM2G071518	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.48843 x 10^-1	453	404	414	401	52.86%	49.20%	857	815	RefGen V2	χ2 p-value for B73 x Mo17: '.0941683' χ2 p-value for Mo17 x B73: '.648843' Biased in favor of strain: ''
GRMZM2G071518	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.838534 x 10^-1	286	139	107	251	67.29%	70.11%	425	358	RefGen V2	χ2 p-value for B73 x Mo17: '.7838534' χ2 p-value for Mo17 x B73: '.1667403' Biased in favor of strain: ''
GRMZM2G071491	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.892677 x 10^-1	31	9	22	41	77.50%	65.08%	40	63	RefGen V2	χ2 p-value for B73 x Mo17: '.1461074' χ2 p-value for Mo17 x B73: '.7892677' Biased in favor of strain: ''
GRMZM2G071491	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.53473 x 10^-2	62	27	50	30	69.66%	37.50%	89	80	RefGen V2	χ2 p-value for B73 x Mo17: '.0002073' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: 'B73'
GRMZM2G071484	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	1	0	0.00%	0.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G071484	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	2		50.00%	0	4	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G071468	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	0	356	2	544	0.00%	99.63%	356	546	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G071468	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2	479	1	417	0.42%	99.76%	481	418	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G071448	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.892554 x 10^-1	85	103	66	101	45.21%	60.48%	188	167	RefGen V2	χ2 p-value for B73 x Mo17: '.1892554' χ2 p-value for Mo17 x B73: '.0067612' Biased in favor of strain: ''
GRMZM2G071448	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.03876 x 10^-1	40	41	41	59	49.38%	59.00%	81	100	RefGen V2	χ2 p-value for B73 x Mo17: '.0009672' χ2 p-value for Mo17 x B73: '.103876' Biased in favor of strain: ''
GRMZM2G071441	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	1	1	100.00%	50.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: ''
GRMZM2G071441	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	2	3	2	60.00%	40.00%	5	5	RefGen V2	χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''
GRMZM2G071433	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.82869 x 10^-2	1638	349	376	435	82.44%	53.64%	1987	811	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.0382869' Biased in favor of strain: ''
GRMZM2G071433	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	30028	8526	7801	10749	77.89%	57.95%	38554	18550	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G071413	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	2	4	2	71.43%	33.33%	7	6	RefGen V2	χ2 p-value for B73 x Mo17: '.789277' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G071413	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	2	0	100.00%	0.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G071405	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	4	0	83.33%	0.00%	6	4	RefGen V2	χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G071405	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G071401	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G071401	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	1	1	50.00%	50.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G071378	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.523041 x 10^-1	313	173	204	195	64.40%	48.87%	486	399	RefGen V2	χ2 p-value for B73 x Mo17: '2.15e-10' χ2 p-value for Mo17 x B73: '.6523041' Biased in favor of strain: ''
GRMZM2G071378	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.544655 x 10^-1	354	133	159	276	72.69%	63.45%	487	435	RefGen V2	χ2 p-value for B73 x Mo17: '.0048083' χ2 p-value for Mo17 x B73: '.1544655' Biased in favor of strain: ''
GRMZM2G071370	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.77331 x 10^-2	32	42	40	53	43.24%	56.99%	74	93	RefGen V2	χ2 p-value for B73 x Mo17: '.0000192' χ2 p-value for Mo17 x B73: '.0477331' Biased in favor of strain: ''
GRMZM2G071370	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.27403 x 10^-2	112	56	53	32	66.67%	37.65%	168	85	RefGen V2	χ2 p-value for B73 x Mo17: '.0000156' χ2 p-value for Mo17 x B73: '.0227403' Biased in favor of strain: 'B73'
GRMZM2G071360	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.74 x 10^-8	136	43	99	34	75.98%	25.56%	179	133	RefGen V2	χ2 p-value for B73 x Mo17: '3.62e-12' χ2 p-value for Mo17 x B73: '1.74e-08' Biased in favor of strain: 'B73'
GRMZM2G071360	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.89 x 10^-6	126	19	61	53	86.90%	46.49%	145	114	RefGen V2	χ2 p-value for B73 x Mo17: '2.37e-07' χ2 p-value for Mo17 x B73: '4.89e-06' Biased in favor of strain: 'B73'
GRMZM2G071349	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.385779 x 10^-1	21	7	12	18	75.00%	60.00%	28	30	RefGen V2	χ2 p-value for B73 x Mo17: '.3495861' χ2 p-value for Mo17 x B73: '.4385779' Biased in favor of strain: ''
GRMZM2G071349	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.857506 x 10^-1	34	12	25	18	73.91%	41.86%	46	43	RefGen V2	χ2 p-value for B73 x Mo17: '.0011798' χ2 p-value for Mo17 x B73: '.2857506' Biased in favor of strain: ''
GRMZM2G071347	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	24	10	11	11	70.59%	50.00%	34	22	RefGen V2	χ2 p-value for B73 x Mo17: '.0163512' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G071347	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.976606 x 10^-1	84	34	47	65	71.19%	58.04%	118	112	RefGen V2	χ2 p-value for B73 x Mo17: '.2976606' χ2 p-value for Mo17 x B73: '.0526666' Biased in favor of strain: ''
GRMZM2G071339	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	0	0	0	100.00%		7	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G071339	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.813122 x 10^-1	175	159	182	151	52.40%	45.35%	334	333	RefGen V2	χ2 p-value for B73 x Mo17: '.3813122' χ2 p-value for Mo17 x B73: '.0893588' Biased in favor of strain: ''
GRMZM2G071333	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1085	236	753	225	82.13%	23.01%	1321	978	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G071333	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3591	649	1702	1079	84.69%	38.80%	4240	2781	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G071319	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.20005 x 10^-2	131	49	69	46	72.78%	40.00%	180	115	RefGen V2	χ2 p-value for B73 x Mo17: '.0820005' χ2 p-value for Mo17 x B73: '1.31e-09' Biased in favor of strain: ''
GRMZM2G071319	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.52 x 10^-10	243	111	169	71	68.64%	29.58%	354	240	RefGen V2	χ2 p-value for B73 x Mo17: '2.29e-12' χ2 p-value for Mo17 x B73: '2.52e-10' Biased in favor of strain: 'B73'
GRMZM2G071310	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.53 x 10^-8	177	67	147	67	72.54%	31.31%	244	214	RefGen V2	χ2 p-value for B73 x Mo17: '1.89e-12' χ2 p-value for Mo17 x B73: '4.53e-08' Biased in favor of strain: 'B73'
GRMZM2G071310	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.83 x 10^-5	184	47	164	181	79.65%	52.46%	231	345	RefGen V2	χ2 p-value for B73 x Mo17: '.0000283' χ2 p-value for Mo17 x B73: '2.19e-08' Biased in favor of strain: 'B73'
GRMZM2G071307	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		20	3	9	0	86.96%	0.00%	23	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0390015' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: ''
GRMZM2G071307	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.09 x 10^-22	120	4	97	1	96.77%	1.02%	124	98	RefGen V2	χ2 p-value for B73 x Mo17: '2.07e-25' χ2 p-value for Mo17 x B73: '3.09e-22' Biased in favor of strain: 'B73'

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