Displaying data sets 25301 - 25400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G23580 CDPK9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 65 27 70.65% 92 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23580 CDPK9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.857 x 10-3 48 5 90.57% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23575 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.21264 x 10-1 52 18 23 49 74.29% 68.06% 70 72 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.18618'
Avg. expression score for this sample: '123.808'
Avg. expression score in LCM sample: '123.639'
Tissue used: 'pure endosperm, no chalazal'
AT5G23575 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.82555 x 10-1 61 17 67 146 78.21% 68.54% 78 213 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.18618'
Avg. expression score for this sample: '260.026'
Avg. expression score in LCM sample: '123.639'
Tissue used: 'full endosperm'
AT5G23575 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.04379 x 10-1 45 33 12 14 57.69% 53.85% 78 26 TAIR8 Avg. embryo expression (dissected): '146.47'
Avg. embryo expression (LCM): '80.9149'
AT5G23575 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.78274 x 10-1 30 9 76.92% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23575 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.105 x 10-2 233 68 77.41% 301 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23575 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4 x 10-6 206 31 86.92% 237 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23570 SGS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.24989 x 10-1 67 70 48 112 48.91% 70.00% 137 160 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '511.362'
Avg. expression score in LCM sample: '226.759'
Tissue used: 'pure endosperm, no chalazal'
AT5G23570 SGS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.75301 x 10-1 105 79 26 158 57.07% 85.87% 184 184 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '591.926'
Avg. expression score in LCM sample: '226.759'
Tissue used: 'full endosperm'
AT5G23570 SGS3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.17126 x 10-1 58 75 33 24 43.61% 42.11% 133 57 TAIR8 Avg. embryo expression (dissected): '477.577'
Avg. embryo expression (LCM): '383.388'
AT5G23570 SGS3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.1 x 10-5 63 8 88.73% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23570 SGS3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2 x 10-13 89 1 98.89% 90 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23570 SGS3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.412 x 10-3 107 26 80.45% 133 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '87.3976'
Avg. expression score in LCM sample: '58.8505'
Tissue used: 'pure endosperm, no chalazal'
AT5G23550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '89.0992'
Avg. expression score in LCM sample: '58.8505'
Tissue used: 'full endosperm'
AT5G23550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '117.319'
Avg. embryo expression (LCM): '38.6804'
AT5G23550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.52844 x 10-1 33 19 9 32 63.46% 78.05% 52 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.015884'
Avg. expression score for this sample: '721.584'
Avg. expression score in LCM sample: '484.105'
Tissue used: 'pure endosperm, no chalazal'
AT5G23540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.079 x 10-3 42 20 20 111 67.74% 84.73% 62 131 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.015884'
Avg. expression score for this sample: '658.501'
Avg. expression score in LCM sample: '484.105'
Tissue used: 'full endosperm'
AT5G23540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.10638 x 10-1 32 50 6 8 39.02% 57.14% 82 14 TAIR8 Avg. embryo expression (dissected): '1055.64'
Avg. embryo expression (LCM): '954.854'
AT5G23540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.32859 x 10-1 36 7 83.72% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.15392 x 10-1 395 153 72.08% 548 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 267 82 76.50% 349 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23535 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '24.9375'
Avg. expression score in LCM sample: '11.5526'
Tissue used: 'pure endosperm, no chalazal'
AT5G23535 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '23.2695'
Avg. expression score in LCM sample: '11.5526'
Tissue used: 'full endosperm'
AT5G23535 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '84.2675'
Avg. embryo expression (LCM): '170.545'
AT5G23535 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23535 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23535 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23530 CXE18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.66 x 10-4 49 4 4 26 92.45% 86.67% 53 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '61.4081'
Avg. expression score in LCM sample: '7.99567'
Tissue used: 'pure endosperm, no chalazal'
AT5G23530 CXE18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 568 13 44 546 97.76% 92.54% 581 590 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '448.481'
Avg. expression score in LCM sample: '7.99567'
Tissue used: 'full endosperm'
AT5G23530 CXE18 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.78324 x 10-1 75 59 16 12 55.97% 42.86% 134 28 TAIR8 Avg. embryo expression (dissected): '156.162'
Avg. embryo expression (LCM): '175.996'
AT5G23530 CXE18 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 97 5 95.10% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23530 CXE18 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0 x 10-22 262 83 75.94% 345 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23530 CXE18 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1199 x 10-2 721 63 91.96% 784 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.56985 x 10-1 13 10 8 35 56.52% 81.40% 23 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.032258'
Avg. expression score for this sample: '40.5392'
Avg. expression score in LCM sample: '22.1204'
Tissue used: 'pure endosperm, no chalazal'
AT5G23520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.6118 x 10-2 43 11 16 59 79.63% 78.67% 54 75 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.032258'
Avg. expression score for this sample: '67.1647'
Avg. expression score in LCM sample: '22.1204'
Tissue used: 'full endosperm'
AT5G23520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.65799 x 10-1 22 25 8 15 46.81% 65.22% 47 23 TAIR8 Avg. embryo expression (dissected): '65.4586'
Avg. embryo expression (LCM): '69.2982'
AT5G23520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.06449 x 10-1 9 6 60.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.69187 x 10-1 74 33 69.16% 107 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.8489 x 10-1 99 27 78.57% 126 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.07985 x 10-1 9 0 4 4 100.00% 50.00% 9 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.50553'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G23510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 18 9 6 9 66.67% 60.00% 27 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '20.1628'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G23510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '2.2593'
Avg. embryo expression (LCM): '2.14752'
AT5G23510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.987 x 10-3 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.3815 x 10-2 8 9 3 53 47.06% 94.64% 17 56 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002707'
Avg. expression score for this sample: '11.9431'
Avg. expression score in LCM sample: '8.18674'
Tissue used: 'pure endosperm, no chalazal'
AT5G23490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.9299 x 10-2 22 16 3 55 57.89% 94.83% 38 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002707'
Avg. expression score for this sample: '24.7623'
Avg. expression score in LCM sample: '8.18674'
Tissue used: 'full endosperm'
AT5G23490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.15491 x 10-1 9 31 4 9 22.50% 69.23% 40 13 TAIR8 Avg. embryo expression (dissected): '16.8083'
Avg. embryo expression (LCM): '24.7404'
AT5G23490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.8769 x 10-2 15 0 100.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.585 x 10-3 152 11 93.25% 163 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.892 x 10-2 68 5 93.15% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.80402 x 10-1 38 5 37 15 88.37% 28.85% 43 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.062813'
Avg. expression score for this sample: '77.3346'
Avg. expression score in LCM sample: '11.773'
Tissue used: 'pure endosperm, no chalazal'
AT5G23480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.64252 x 10-1 27 3 24 7 90.00% 22.58% 30 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.062813'
Avg. expression score for this sample: '42.625'
Avg. expression score in LCM sample: '11.773'
Tissue used: 'full endosperm'
AT5G23480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 102 25 97 20 80.31% 17.09% 127 117 TAIR8 Avg. embryo expression (dissected): '363.269'
Avg. embryo expression (LCM): '31.8611'
AT5G23480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.27409 x 10-1 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.1256 x 10-2 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.578 x 10-3 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.564789'
Avg. expression score in LCM sample: '1.61677'
Tissue used: 'pure endosperm, no chalazal'
AT5G23470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.93181'
Avg. expression score in LCM sample: '1.61677'
Tissue used: 'full endosperm'
AT5G23470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G23470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.31094 x 10-1 11 2 3 4 84.62% 57.14% 13 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.806561'
Avg. expression score for this sample: '10.8557'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G23460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 2 4 7 75.00% 63.64% 8 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.806561'
Avg. expression score for this sample: '7.75603'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G23460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.72548 x 10-1 9 4 1 1 69.23% 50.00% 13 2 TAIR8 Avg. embryo expression (dissected): '11.935'
Avg. embryo expression (LCM): '18.7751'
AT5G23460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.3 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.69501 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.69501 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23450 LCBK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '899.296'
Avg. expression score in LCM sample: '400.753'
Tissue used: 'pure endosperm, no chalazal'
AT5G23450 LCBK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '794.552'
Avg. expression score in LCM sample: '400.753'
Tissue used: 'full endosperm'
AT5G23450 LCBK1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '654.202'
Avg. embryo expression (LCM): '266.82'
AT5G23450 LCBK1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23450 LCBK1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23450 LCBK1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23440 FTRA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.42424 x 10-1 0 4 1 1 0.00% 50.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.688168'
Avg. expression score for this sample: '224.626'
Avg. expression score in LCM sample: '79.0013'
Tissue used: 'pure endosperm, no chalazal'
AT5G23440 FTRA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 1 0 0 85.71% 7 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.688168'
Avg. expression score for this sample: '88.5953'
Avg. expression score in LCM sample: '79.0013'
Tissue used: 'full endosperm'
AT5G23440 FTRA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 2 0 1 50.00% 100.00% 4 1 TAIR8 Avg. embryo expression (dissected): '233.089'
Avg. embryo expression (LCM): '182.099'
AT5G23440 FTRA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23440 FTRA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.85714 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23440 FTRA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '110.762'
Avg. expression score in LCM sample: '67.9338'
Tissue used: 'pure endosperm, no chalazal'
AT5G23430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '124.911'
Avg. expression score in LCM sample: '67.9338'
Tissue used: 'full endosperm'
AT5G23430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '138.634'
Avg. embryo expression (LCM): '190.338'
AT5G23430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23420 HMGB6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.66106 x 10-1 475 223 191 358 68.05% 65.21% 698 549 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.621557'
Avg. expression score for this sample: '786.888'
Avg. expression score in LCM sample: '93.905'
Tissue used: 'pure endosperm, no chalazal'
AT5G23420 HMGB6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.48263 x 10-1 88 43 135 308 67.18% 69.53% 131 443 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.621557'
Avg. expression score for this sample: '440.73'
Avg. expression score in LCM sample: '93.905'
Tissue used: 'full endosperm'
AT5G23420 HMGB6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.97185 x 10-1 859 732 190 144 53.99% 43.11% 1591 334 TAIR8 Avg. embryo expression (dissected): '1742.99'
Avg. embryo expression (LCM): '1459.65'
AT5G23420 HMGB6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.40019 x 10-1 20 7 74.07% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23420 HMGB6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.40834 x 10-1 126 57 68.85% 183 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23420 HMGB6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9 x 10-10 201 31 86.64% 232 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23411 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '14.1341'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G23411 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.4425'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'