GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G074085	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	7217	2992	4678	2675	70.69%	36.38%	10209	7353	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G074085	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	14133	3475	7090	6164	80.26%	46.51%	17608	13254	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G074083	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	4	0	4	60.00%	100.00%	10	4	RefGen V2	χ2 p-value for B73 x Mo17: '.654709' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G074083	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G074082	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.27 x 10^-5	117	55	119	62	68.02%	34.25%	172	181	RefGen V2	χ2 p-value for B73 x Mo17: '2.27e-06' χ2 p-value for Mo17 x B73: '.0000227' Biased in favor of strain: 'B73'
GRMZM2G074082	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.223759 x 10^-1	59	35	50	84	62.77%	62.69%	94	134	RefGen V2	χ2 p-value for B73 x Mo17: '.4223759' χ2 p-value for Mo17 x B73: '.3283929' Biased in favor of strain: ''
GRMZM2G074053	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.814 x 10^-4	465	306	416	316	60.31%	43.17%	771	732	RefGen V2	χ2 p-value for B73 x Mo17: '.0001814' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G074053	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.35 x 10^-26	1855	1082	1657	1103	63.16%	39.96%	2937	2760	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '5.35e-26' Biased in favor of strain: 'B73'
GRMZM2G074040	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.282 x 10^-4	19	0	32	9	100.00%	21.95%	19	41	RefGen V2	χ2 p-value for B73 x Mo17: '.0000131' χ2 p-value for Mo17 x B73: '.0003282' Biased in favor of strain: 'B73'
GRMZM2G074040	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	12	0	100.00%	0.00%	3	12	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '9.63e-07' Biased in favor of strain: ''
GRMZM2G074028	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.41 x 10^-10	384	326	201	663	54.08%	76.74%	710	864	RefGen V2	χ2 p-value for B73 x Mo17: '1.14e-12' χ2 p-value for Mo17 x B73: '3.41e-10' Biased in favor of strain: 'Mo17'
GRMZM2G074028	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.611 x 10^-4	291	386	284	486	42.98%	63.12%	677	770	RefGen V2	χ2 p-value for B73 x Mo17: '.0002611' χ2 p-value for Mo17 x B73: '3.35e-13' Biased in favor of strain: 'Mo17'
GRMZM2G074024	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.053805 x 10^-1	23	29	29	19	44.23%	39.58%	52	48	RefGen V2	χ2 p-value for B73 x Mo17: '.4053805' χ2 p-value for Mo17 x B73: '.1489147' Biased in favor of strain: ''
GRMZM2G074024	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.237287 x 10^-1	36	14	37	41	72.00%	52.56%	50	78	RefGen V2	χ2 p-value for B73 x Mo17: '.4237287' χ2 p-value for Mo17 x B73: '.008239' Biased in favor of strain: ''
GRMZM2G074017	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.81 x 10^-21	226	277	76	465	44.93%	85.95%	503	541	RefGen V2	χ2 p-value for B73 x Mo17: '4.58e-25' χ2 p-value for Mo17 x B73: '1.81e-21' Biased in favor of strain: 'Mo17'
GRMZM2G074017	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.319 x 10^-3	52	24	25	83	68.42%	76.85%	76	108	RefGen V2	χ2 p-value for B73 x Mo17: '.001319' χ2 p-value for Mo17 x B73: '2.39e-08' Biased in favor of strain: ''
GRMZM2G074015	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.43 x 10^-5	694	548	834	594	55.88%	41.60%	1242	1428	RefGen V2	χ2 p-value for B73 x Mo17: '.0000343' χ2 p-value for Mo17 x B73: '2.14e-10' Biased in favor of strain: 'B73'
GRMZM2G074015	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.845372 x 10^-1	147	60	125	134	71.01%	51.74%	207	259	RefGen V2	χ2 p-value for B73 x Mo17: '.1845372' χ2 p-value for Mo17 x B73: '3.46e-07' Biased in favor of strain: ''
GRMZM2G073988	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.62 x 10^-9	311	73	201	164	80.99%	44.93%	384	365	RefGen V2	χ2 p-value for B73 x Mo17: '2.62e-09' χ2 p-value for Mo17 x B73: '1.27e-18' Biased in favor of strain: 'B73'
GRMZM2G073988	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.07874 x 10^-2	241	156	234	182	60.71%	43.75%	397	416	RefGen V2	χ2 p-value for B73 x Mo17: '.0000199' χ2 p-value for Mo17 x B73: '.0107874' Biased in favor of strain: 'B73'
GRMZM2G073979	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	3	0	0	50.00%		6	0	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G073979	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	1	0	100.00%	0.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G073959	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.434529 x 10^-1	138	67	128	173	67.32%	57.48%	205	301	RefGen V2	χ2 p-value for B73 x Mo17: '.8434529' χ2 p-value for Mo17 x B73: '.0007174' Biased in favor of strain: ''
GRMZM2G073959	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.21 x 10^-10	251	126	217	90	66.58%	29.32%	377	307	RefGen V2	χ2 p-value for B73 x Mo17: '1.21e-10' χ2 p-value for Mo17 x B73: '4.22e-13' Biased in favor of strain: 'B73'
GRMZM2G073954	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.587953 x 10^-1	42	34	55	26	55.26%	32.10%	76	81	RefGen V2	χ2 p-value for B73 x Mo17: '.3587953' χ2 p-value for Mo17 x B73: '.001272' Biased in favor of strain: ''
GRMZM2G073954	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		15	1	3	2	93.75%	40.00%	16	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0215569' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: ''
GRMZM2G073950	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.88258 x 10^-2	155	58	103	129	72.77%	55.60%	213	232	RefGen V2	χ2 p-value for B73 x Mo17: '.0588258' χ2 p-value for Mo17 x B73: '.0003507' Biased in favor of strain: ''
GRMZM2G073950	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.61 x 10^-18	458	228	506	237	66.76%	31.90%	686	743	RefGen V2	χ2 p-value for B73 x Mo17: '1.61e-18' χ2 p-value for Mo17 x B73: '5.69e-23' Biased in favor of strain: 'B73'
GRMZM2G073943	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.23302 x 10^-2	27	14	10	24	65.85%	70.59%	41	34	RefGen V2	χ2 p-value for B73 x Mo17: '.0423302' χ2 p-value for Mo17 x B73: '.0163512' Biased in favor of strain: ''
GRMZM2G073943	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.220005 x 10^-1	58	9	15	23	86.57%	60.53%	67	38	RefGen V2	χ2 p-value for B73 x Mo17: '.0005494' χ2 p-value for Mo17 x B73: '.4220005' Biased in favor of strain: ''
GRMZM2G073934	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.803363 x 10^-1	184	86	119	234	68.15%	66.29%	270	353	RefGen V2	χ2 p-value for B73 x Mo17: '.6056298' χ2 p-value for Mo17 x B73: '.8803363' Biased in favor of strain: ''
GRMZM2G073934	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.225389 x 10^-1	262	196	251	246	57.21%	49.50%	458	497	RefGen V2	χ2 p-value for B73 x Mo17: '.0020425' χ2 p-value for Mo17 x B73: '.8225389' Biased in favor of strain: ''
GRMZM2G073931	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.008251 x 10^-1	90	108	80	139	45.45%	63.47%	198	219	RefGen V2	χ2 p-value for B73 x Mo17: '.2008251' χ2 p-value for Mo17 x B73: '.000067' Biased in favor of strain: ''
GRMZM2G073931	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	3	0		0.00%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G073928	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.5 x 10^-10	2	34	33	8	5.56%	19.51%	36	41	RefGen V2	χ2 p-value for B73 x Mo17: '7.35e-15' χ2 p-value for Mo17 x B73: '1.50e-10' Biased in favor of strain: ''
GRMZM2G073928	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.083444 x 10^-1	83	94	106	78	46.89%	42.39%	177	184	RefGen V2	χ2 p-value for B73 x Mo17: '.4083444' χ2 p-value for Mo17 x B73: '.039' Biased in favor of strain: ''
GRMZM2G073913	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.752335 x 10^-1	13	8	14	8	61.90%	36.36%	21	22	RefGen V2	χ2 p-value for B73 x Mo17: '.2752335' χ2 p-value for Mo17 x B73: '.2008251' Biased in favor of strain: ''
GRMZM2G073913	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G073912	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	8	7	66.67%	46.67%	3	15	RefGen V2	χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.1003482' Biased in favor of strain: ''
GRMZM2G073912	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	4	1	5	50.00%	83.33%	8	6	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: ''
GRMZM2G073908	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.568392 x 10^-1	11	5	11	17	68.75%	60.71%	16	28	RefGen V2	χ2 p-value for B73 x Mo17: '.1336144' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: ''
GRMZM2G073908	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.495735 x 10^-1	32	10	42	67	76.19%	61.47%	42	109	RefGen V2	χ2 p-value for B73 x Mo17: '.1904392' χ2 p-value for Mo17 x B73: '.2495735' Biased in favor of strain: ''
GRMZM2G073888	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.32646 x 10^-2	10	0	4	20	100.00%	83.33%	10	24	RefGen V2	χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.0832646' Biased in favor of strain: ''
GRMZM2G073888	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.327676 x 10^-1	16	8	15	11	66.67%	42.31%	24	26	RefGen V2	χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.4327676' Biased in favor of strain: ''
GRMZM2G073884	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.24 x 10^-10	39	0	71	0	100.00%	0.00%	39	71	RefGen V2	χ2 p-value for B73 x Mo17: '4.24e-10' χ2 p-value for Mo17 x B73: '3.57e-17' Biased in favor of strain: 'B73'
GRMZM2G073884	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G073882	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	3	0	100.00%	0.00%	1	3	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G073882	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.33763 x 10^-2	99	137	94	166	41.95%	63.85%	236	260	RefGen V2	χ2 p-value for B73 x Mo17: '.0133763' χ2 p-value for Mo17 x B73: '8.00e-06' Biased in favor of strain: 'Mo17'
GRMZM2G073861	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	5	5	4	10	50.00%	71.43%	10	14	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1088094' Biased in favor of strain: ''
GRMZM2G073861	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	1	0	0.00%	0.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G073860	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		10	0	7	0	100.00%	0.00%	10	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: ''
GRMZM2G073860	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0249 x 10^-3	156	102	185	127	60.47%	40.71%	258	312	RefGen V2	χ2 p-value for B73 x Mo17: '.0007741' χ2 p-value for Mo17 x B73: '.0010249' Biased in favor of strain: 'B73'
GRMZM2G073842	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G073842	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	0	7	0	100.00%	0.00%	8	7	RefGen V2	χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: ''
GRMZM2G073836	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.206714 x 10^-1	0	10	2	10	0.00%	83.33%	10	12	RefGen V2	χ2 p-value for B73 x Mo17: '7.74e-06' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G073836	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	0	1	80.00%	100.00%	5	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G073826	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.082937 x 10^-1	96	75	124	71	56.14%	36.41%	171	195	RefGen V2	χ2 p-value for B73 x Mo17: '.1082937' χ2 p-value for Mo17 x B73: '.0001474' Biased in favor of strain: ''
GRMZM2G073826	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.322324 x 10^-1	106	67	62	38	61.27%	38.00%	173	100	RefGen V2	χ2 p-value for B73 x Mo17: '.1322324' χ2 p-value for Mo17 x B73: '1.19e-09' Biased in favor of strain: ''
GRMZM2G073823	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	1	1	66.67%	50.00%	3	2	RefGen V2	χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: ''
GRMZM2G073823	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G073814	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1464	576	1945	964	71.76%	33.14%	2040	2909	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G073814	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.937 x 10^-4	44	5	25	10	89.80%	28.57%	49	35	RefGen V2	χ2 p-value for B73 x Mo17: '.0005937' χ2 p-value for Mo17 x B73: '1.74e-06' Biased in favor of strain: 'B73'
GRMZM2G073788	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.093099 x 10^-1	66	18	34	59	78.57%	63.44%	84	93	RefGen V2	χ2 p-value for B73 x Mo17: '.0206395' χ2 p-value for Mo17 x B73: '.5093099' Biased in favor of strain: ''
GRMZM2G073788	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.39 x 10^-9	252	122	197	95	67.38%	32.53%	374	292	RefGen V2	χ2 p-value for B73 x Mo17: '1.79e-11' χ2 p-value for Mo17 x B73: '2.39e-09' Biased in favor of strain: 'B73'
GRMZM2G073779	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.9 x 10^-11	69	8	59	6	89.61%	9.23%	77	65	RefGen V2	χ2 p-value for B73 x Mo17: '3.61e-12' χ2 p-value for Mo17 x B73: '4.90e-11' Biased in favor of strain: 'B73'
GRMZM2G073779	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.71182 x 10^-2	149	16	50	64	90.30%	56.14%	165	114	RefGen V2	χ2 p-value for B73 x Mo17: '1.19e-10' χ2 p-value for Mo17 x B73: '.0171182' Biased in favor of strain: ''
GRMZM2G073774	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	1	3	66.67%	75.00%	3	4	RefGen V2	χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: ''
GRMZM2G073774	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.25094 x 10^-2	0	16	3	11	0.00%	78.57%	16	14	RefGen V2	χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: 'Mo17'
GRMZM2G073770	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.200723 x 10^-1	431	455	569	531	48.65%	48.27%	886	1100	RefGen V2	χ2 p-value for B73 x Mo17: '.4200723' χ2 p-value for Mo17 x B73: '.2519014' Biased in favor of strain: ''
GRMZM2G073770	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.63934 x 10^-2	272	167	76	283	61.96%	78.83%	439	359	RefGen V2	χ2 p-value for B73 x Mo17: '.0363934' χ2 p-value for Mo17 x B73: '1.01e-06' Biased in favor of strain: ''
GRMZM2G073755	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.281107 x 10^-1	88	37	47	105	70.40%	69.08%	125	152	RefGen V2	χ2 p-value for B73 x Mo17: '.3759476' χ2 p-value for Mo17 x B73: '.5281107' Biased in favor of strain: ''
GRMZM2G073755	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.62 x 10^-28	859	397	899	489	68.39%	35.23%	1256	1388	RefGen V2	χ2 p-value for B73 x Mo17: '7.63e-39' χ2 p-value for Mo17 x B73: '3.62e-28' Biased in favor of strain: 'B73'
GRMZM2G073750	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.249468 x 10^-1	258	253	312	186	50.49%	37.35%	511	498	RefGen V2	χ2 p-value for B73 x Mo17: '.8249468' χ2 p-value for Mo17 x B73: '1.64e-08' Biased in favor of strain: ''
GRMZM2G073750	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.958425 x 10^-1	93	51	149	111	64.58%	42.69%	144	260	RefGen V2	χ2 p-value for B73 x Mo17: '.5958425' χ2 p-value for Mo17 x B73: '2.39e-16' Biased in favor of strain: ''
GRMZM2G073731	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.19 x 10^-14	127	3	45	4	97.69%	8.16%	130	49	RefGen V2	χ2 p-value for B73 x Mo17: '6.19e-14' χ2 p-value for Mo17 x B73: '3.71e-18' Biased in favor of strain: 'B73'
GRMZM2G073731	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.24 x 10^-27	281	52	201	35	84.38%	14.83%	333	236	RefGen V2	χ2 p-value for B73 x Mo17: '4.02e-36' χ2 p-value for Mo17 x B73: '3.24e-27' Biased in favor of strain: 'B73'
GRMZM2G073725	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.05 x 10^-15	1011	650	669	406	60.87%	37.77%	1661	1075	RefGen V2	χ2 p-value for B73 x Mo17: '8.17e-19' χ2 p-value for Mo17 x B73: '1.05e-15' Biased in favor of strain: 'B73'
GRMZM2G073725	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.035349 x 10^-1	471	212	431	498	68.96%	53.61%	683	929	RefGen V2	χ2 p-value for B73 x Mo17: '.2035349' χ2 p-value for Mo17 x B73: '3.05e-17' Biased in favor of strain: ''
GRMZM2G073700	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	0.0	9700	298	294	6158	97.02%	95.44%	9998	6452	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G073700	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	0.0	792	73	33	411	91.56%	92.57%	865	444	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G073693	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.053805 x 10^-1	5	10	5	8	33.33%	61.54%	15	13	RefGen V2	χ2 p-value for B73 x Mo17: '.1967056' χ2 p-value for Mo17 x B73: '.4053805' Biased in favor of strain: ''
GRMZM2G073693	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.624038 x 10^-1	17	14	16	16	54.84%	50.00%	31	32	RefGen V2	χ2 p-value for B73 x Mo17: '.1624038' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G073671	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.90169 x 10^-2	11	0	10	0	100.00%	0.00%	11	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0190169' χ2 p-value for Mo17 x B73: '7.74e-06' Biased in favor of strain: ''
GRMZM2G073671	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	305	3	206	1	99.03%	0.48%	308	207	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G073668	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	6	4	6	6	60.00%	50.00%	10	12	RefGen V2	χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G073668	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	4	9	83.33%	69.23%	6	13	RefGen V2	χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.8445194' Biased in favor of strain: ''
GRMZM2G073630	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.79743 x 10^-2	178	70	119	180	71.77%	60.20%	248	299	RefGen V2	χ2 p-value for B73 x Mo17: '.0879743' χ2 p-value for Mo17 x B73: '.0177018' Biased in favor of strain: ''
GRMZM2G073630	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.6997 x 10^-3	329	169	247	182	66.06%	42.42%	498	429	RefGen V2	χ2 p-value for B73 x Mo17: '7.51e-13' χ2 p-value for Mo17 x B73: '.0016997' Biased in favor of strain: 'B73'
GRMZM2G073628	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.12419 x 10^-2	936	666	848	766	58.43%	47.46%	1602	1614	RefGen V2	χ2 p-value for B73 x Mo17: '1.52e-11' χ2 p-value for Mo17 x B73: '.0412419' Biased in favor of strain: 'B73'
GRMZM2G073628	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.245933 x 10^-1	6479	3133	4994	8485	67.41%	62.95%	9612	13479	RefGen V2	χ2 p-value for B73 x Mo17: '.1245933' χ2 p-value for Mo17 x B73: '5.48e-20' Biased in favor of strain: ''
GRMZM2G073591	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.2836 x 10^-3	26	2	19	4	92.86%	17.39%	28	23	RefGen V2	χ2 p-value for B73 x Mo17: '.0032836' χ2 p-value for Mo17 x B73: '5.36e-07' Biased in favor of strain: 'B73'
GRMZM2G073591	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.4 x 10^-5	167	102	147	80	62.08%	35.24%	269	227	RefGen V2	χ2 p-value for B73 x Mo17: '.000074' χ2 p-value for Mo17 x B73: '8.71e-06' Biased in favor of strain: 'B73'
GRMZM2G073584	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.7166 x 10^-3	221	165	167	121	57.25%	42.01%	386	288	RefGen V2	χ2 p-value for B73 x Mo17: '.0043675' χ2 p-value for Mo17 x B73: '.0067166' Biased in favor of strain: 'B73'
GRMZM2G073584	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.376904 x 10^-1	218	110	174	124	66.46%	41.61%	328	298	RefGen V2	χ2 p-value for B73 x Mo17: '.9376904' χ2 p-value for Mo17 x B73: '4.50e-20' Biased in favor of strain: ''
GRMZM2G073578	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.94 x 10^-9	96	4	46	22	96.00%	32.35%	100	68	RefGen V2	χ2 p-value for B73 x Mo17: '4.89e-10' χ2 p-value for Mo17 x B73: '1.94e-09' Biased in favor of strain: 'B73'
GRMZM2G073578	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.523 x 10^-4	49	18	55	8	73.13%	12.70%	67	63	RefGen V2	χ2 p-value for B73 x Mo17: '.0001523' χ2 p-value for Mo17 x B73: '3.19e-09' Biased in favor of strain: 'B73'
GRMZM2G073571	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.087251 x 10^-1	398	341	340	308	53.86%	47.53%	739	648	RefGen V2	χ2 p-value for B73 x Mo17: '.0360132' χ2 p-value for Mo17 x B73: '.2087251' Biased in favor of strain: ''
GRMZM2G073571	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.820601 x 10^-1	659	257	330	659	71.94%	66.63%	916	989	RefGen V2	χ2 p-value for B73 x Mo17: '.0007051' χ2 p-value for Mo17 x B73: '.9820601' Biased in favor of strain: ''
GRMZM2G073548	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	9	19	100.00%	67.86%	5	28	RefGen V2	χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.8936949' Biased in favor of strain: ''
GRMZM2G073548	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.79918 x 10^-2	139	94	11	24	59.66%	68.57%	233	35	RefGen V2	χ2 p-value for B73 x Mo17: '.0031979' χ2 p-value for Mo17 x B73: '.0279918' Biased in favor of strain: ''

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