Displaying data sets 25201 - 25300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G23740 RPS11-BETA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.20184 x 10-1 56 49 24 97 53.33% 80.17% 105 121 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.424204'
Avg. expression score for this sample: '133.682'
Avg. expression score in LCM sample: '125.314'
Tissue used: 'pure endosperm, no chalazal'
AT5G23740 RPS11-BETA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.11776 x 10-1 186 117 163 313 61.39% 65.76% 303 476 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.424204'
Avg. expression score for this sample: '288.24'
Avg. expression score in LCM sample: '125.314'
Tissue used: 'full endosperm'
AT5G23740 RPS11-BETA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.3384 x 10-2 198 290 17 38 40.57% 69.09% 488 55 TAIR8 Avg. embryo expression (dissected): '362.489'
Avg. embryo expression (LCM): '1418'
AT5G23740 RPS11-BETA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.64036 x 10-1 81 41 66.39% 122 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23740 RPS11-BETA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7 x 10-7 223 52 81.09% 275 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23740 RPS11-BETA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.4 x 10-9 248 55 81.85% 303 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23730 RUP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '28.6606'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G23730 RUP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.30769 x 10-1 2 0 0 5 100.00% 100.00% 2 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '32.5791'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G23730 RUP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '11.1557'
Avg. embryo expression (LCM): '12.5963'
AT5G23730 RUP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23730 RUP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23730 RUP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23720 PHS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.8537 x 10-2 69 20 29 86 77.53% 74.78% 89 115 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.1e-10'
Avg. expression score for this sample: '29.9052'
Avg. expression score in LCM sample: '24.1487'
Tissue used: 'pure endosperm, no chalazal'
AT5G23720 PHS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7 x 10-9 202 38 62 263 84.17% 80.92% 240 325 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.1e-10'
Avg. expression score for this sample: '62.5003'
Avg. expression score in LCM sample: '24.1487'
Tissue used: 'full endosperm'
AT5G23720 PHS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.74739 x 10-1 20 19 7 18 51.28% 72.00% 39 25 TAIR8 Avg. embryo expression (dissected): '20.829'
Avg. embryo expression (LCM): '23.0575'
AT5G23720 PHS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.3403 x 10-1 71 11 86.59% 82 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23720 PHS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.6 x 10-5 696 93 88.21% 789 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23720 PHS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.3 x 10-7 558 59 90.44% 617 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.71578 x 10-1 125 23 56 55 84.46% 49.55% 148 111 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000102'
Avg. expression score for this sample: '89.303'
Avg. expression score in LCM sample: '125.844'
Tissue used: 'pure endosperm, no chalazal'
AT5G23710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.6 x 10-6 254 28 80 150 90.07% 65.22% 282 230 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000102'
Avg. expression score for this sample: '139.633'
Avg. expression score in LCM sample: '125.844'
Tissue used: 'full endosperm'
AT5G23710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.165 x 10-3 128 50 23 9 71.91% 28.12% 178 32 TAIR8 Avg. embryo expression (dissected): '108.417'
Avg. embryo expression (LCM): '150.527'
AT5G23710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.489 x 10-3 60 37 61.86% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1892 x 10-2 163 79 67.36% 242 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2 x 10-15 523 46 91.92% 569 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.92075 x 10-1 2 0 4 1 100.00% 20.00% 2 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.728282'
Avg. expression score for this sample: '4.96526'
Avg. expression score in LCM sample: '2.49865'
Tissue used: 'pure endosperm, no chalazal'
AT5G23700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 3 1 1 62.50% 50.00% 8 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.728282'
Avg. expression score for this sample: '3.87959'
Avg. expression score in LCM sample: '2.49865'
Tissue used: 'full endosperm'
AT5G23700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 3 0 1 40.00% 100.00% 5 1 TAIR8 Avg. embryo expression (dissected): '1.73375'
Avg. embryo expression (LCM): '2.13496'
AT5G23700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.73684 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.75759 x 10-1 144 62 69.90% 206 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.24045 x 10-1 80 44 64.52% 124 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 1 0 1 80.00% 100.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.259636'
Avg. expression score for this sample: '1.59596'
Avg. expression score in LCM sample: '2.48395'
Tissue used: 'pure endosperm, no chalazal'
AT5G23690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.13633 x 10-1 8 2 3 10 80.00% 76.92% 10 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.259636'
Avg. expression score for this sample: '2.43944'
Avg. expression score in LCM sample: '2.48395'
Tissue used: 'full endosperm'
AT5G23690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.91329 x 10-1 13 6 5 3 68.42% 37.50% 19 8 TAIR8 Avg. embryo expression (dissected): '9.75509'
Avg. embryo expression (LCM): '4.94808'
AT5G23690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.06452 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.2989 x 10-2 8 8 50.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.44858 x 10-1 26 5 83.87% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1798.02'
Avg. expression score in LCM sample: '269.016'
Tissue used: 'pure endosperm, no chalazal'
AT5G23680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1437.74'
Avg. expression score in LCM sample: '269.016'
Tissue used: 'full endosperm'
AT5G23680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2665.92'
Avg. embryo expression (LCM): '764.252'
AT5G23680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23670 LCB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 1 1 33.33% 50.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '46.2681'
Avg. expression score in LCM sample: '37.8177'
Tissue used: 'pure endosperm, no chalazal'
AT5G23670 LCB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 3 1 7 40.00% 87.50% 5 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '74.3883'
Avg. expression score in LCM sample: '37.8177'
Tissue used: 'full endosperm'
AT5G23670 LCB2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 3 0 1 50.00% 100.00% 6 1 TAIR8 Avg. embryo expression (dissected): '69.9938'
Avg. embryo expression (LCM): '51.8167'
AT5G23670 LCB2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.21053 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23670 LCB2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.67285 x 10-1 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23670 LCB2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.2496 x 10-2 17 2 89.47% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23665 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G23665 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G23665 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G23665 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23665 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23665 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23660 SWEET12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.263 x 10-2 19 3 0 11 86.36% 100.00% 22 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '33.8121'
Avg. expression score in LCM sample: '16.2559'
Tissue used: 'pure endosperm, no chalazal'
AT5G23660 SWEET12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 115 6 2 381 95.04% 99.48% 121 383 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '220.469'
Avg. expression score in LCM sample: '16.2559'
Tissue used: 'full endosperm'
AT5G23660 SWEET12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.14286 x 10-1 1 0 0 3 100.00% 100.00% 1 3 TAIR8 Avg. embryo expression (dissected): '9.24955'
Avg. embryo expression (LCM): '2.97638'
AT5G23660 SWEET12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.66 x 10-4 33 6 84.62% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23660 SWEET12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.26441 x 10-1 71 0 100.00% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23660 SWEET12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.43622 x 10-1 128 3 97.71% 131 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.51079'
Avg. expression score in LCM sample: '4.35058'
Tissue used: 'pure endosperm, no chalazal'
AT5G23650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.37572'
Avg. expression score in LCM sample: '4.35058'
Tissue used: 'full endosperm'
AT5G23650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G23650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 190 55 77.55% 245 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23650 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9406 x 10-1 47 29 61.84% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G23640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G23640 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G23640 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23640 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23640 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23630 PDR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.20798 x 10-1 61 23 27 50 72.62% 64.94% 84 77 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.08912'
Avg. expression score for this sample: '366.146'
Avg. expression score in LCM sample: '283.773'
Tissue used: 'pure endosperm, no chalazal'
AT5G23630 PDR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.3182 x 10-2 74 22 48 126 77.08% 72.41% 96 174 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.08912'
Avg. expression score for this sample: '301.3'
Avg. expression score in LCM sample: '283.773'
Tissue used: 'full endosperm'
AT5G23630 PDR2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 37 54 16 33 40.66% 67.35% 91 49 TAIR8 Avg. embryo expression (dissected): '414.847'
Avg. embryo expression (LCM): '291.397'
AT5G23630 PDR2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.3697 x 10-2 28 4 87.50% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23630 PDR2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.4532 x 10-2 269 73 78.65% 342 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23630 PDR2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-6 339 56 85.82% 395 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 2 3 5 77.78% 62.50% 9 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.836749'
Avg. expression score for this sample: '238.282'
Avg. expression score in LCM sample: '82.7052'
Tissue used: 'pure endosperm, no chalazal'
AT5G23610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.05438 x 10-1 17 3 8 10 85.00% 55.56% 20 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.836749'
Avg. expression score for this sample: '270.669'
Avg. expression score in LCM sample: '82.7052'
Tissue used: 'full endosperm'
AT5G23610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 1 1 1 75.00% 50.00% 4 2 TAIR8 Avg. embryo expression (dissected): '165.914'
Avg. embryo expression (LCM): '129.353'
AT5G23610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.44139 x 10-1 12 3 80.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.179 x 10-3 20 0 100.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.80172 x 10-1 4 2 4 2 66.67% 33.33% 6 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.57009'
Avg. expression score for this sample: '120.385'
Avg. expression score in LCM sample: '62.2016'
Tissue used: 'pure endosperm, no chalazal'
AT5G23600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.31218 x 10-1 25 4 14 5 86.21% 26.32% 29 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.57009'
Avg. expression score for this sample: '103.216'
Avg. expression score in LCM sample: '62.2016'
Tissue used: 'full endosperm'
AT5G23600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.80129 x 10-1 15 7 1 1 68.18% 50.00% 22 2 TAIR8 Avg. embryo expression (dissected): '144.859'
Avg. embryo expression (LCM): '59.0504'
AT5G23600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.7 x 10-12 7 82 7.87% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9 x 10-7 79 4 95.18% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.76737 x 10-1 31 20 21 22 60.78% 51.16% 51 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.807622'
Avg. expression score for this sample: '72.3209'
Avg. expression score in LCM sample: '44.5347'
Tissue used: 'pure endosperm, no chalazal'
AT5G23590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.98364 x 10-1 78 25 51 90 75.73% 63.83% 103 141 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.807622'
Avg. expression score for this sample: '117.558'
Avg. expression score in LCM sample: '44.5347'
Tissue used: 'full endosperm'
AT5G23590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.03117 x 10-1 32 26 4 9 55.17% 69.23% 58 13 TAIR8 Avg. embryo expression (dissected): '74.9837'
Avg. embryo expression (LCM): '59.2011'
AT5G23590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.9348 x 10-2 18 3 85.71% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.48687 x 10-1 220 124 63.95% 344 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.01 x 10-4 219 56 79.64% 275 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G23580 CDPK9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.9591 x 10-1 11 11 2 6 50.00% 75.00% 22 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.627203'
Avg. expression score for this sample: '41.8661'
Avg. expression score in LCM sample: '56.2048'
Tissue used: 'pure endosperm, no chalazal'
AT5G23580 CDPK9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.37501 x 10-1 25 9 25 68 73.53% 73.12% 34 93 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.627203'
Avg. expression score for this sample: '76.8167'
Avg. expression score in LCM sample: '56.2048'
Tissue used: 'full endosperm'
AT5G23580 CDPK9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.40071 x 10-1 10 4 0 0 71.43% 14 0 TAIR8 Avg. embryo expression (dissected): '36.7027'
Avg. embryo expression (LCM): '50.1715'
AT5G23580 CDPK9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.3887 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'