GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G074572	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.91 x 10^-6	236	61	196	202	79.46%	50.75%	297	398	RefGen V2	χ2 p-value for B73 x Mo17: '2.91e-06' χ2 p-value for Mo17 x B73: '1.65e-11' Biased in favor of strain: 'B73'
GRMZM2G074572	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.17 x 10^-19	554	295	583	297	65.25%	33.75%	849	880	RefGen V2	χ2 p-value for B73 x Mo17: '6.17e-19' χ2 p-value for Mo17 x B73: '5.36e-22' Biased in favor of strain: 'B73'
GRMZM2G074567	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.0 x 10^-10	601	277	435	268	68.45%	38.12%	878	703	RefGen V2	χ2 p-value for B73 x Mo17: '7.89e-28' χ2 p-value for Mo17 x B73: '3.00e-10' Biased in favor of strain: 'B73'
GRMZM2G074567	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1537	118	792	199	92.87%	20.08%	1655	991	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G074549	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.040362 x 10^-1	35	22	34	78	61.40%	69.64%	57	112	RefGen V2	χ2 p-value for B73 x Mo17: '.3992476' χ2 p-value for Mo17 x B73: '.5040362' Biased in favor of strain: ''
GRMZM2G074549	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.298804 x 10^-1	126	111	173	105	53.16%	37.77%	237	278	RefGen V2	χ2 p-value for B73 x Mo17: '.3298804' χ2 p-value for Mo17 x B73: '.0000454' Biased in favor of strain: ''
GRMZM2G074546	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	0	57	0	100.00%	0.00%	8	57	RefGen V2	χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '4.36e-14' Biased in favor of strain: ''
GRMZM2G074546	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G074543	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	0	0	50.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G074543	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.69 x 10^-27	1286	796	1375	864	61.77%	38.59%	2082	2239	RefGen V2	χ2 p-value for B73 x Mo17: '6.69e-27' χ2 p-value for Mo17 x B73: '3.47e-27' Biased in favor of strain: 'B73'
GRMZM2G074531	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.79 x 10^-9	633	369	521	346	63.17%	39.91%	1002	867	RefGen V2	χ2 p-value for B73 x Mo17: '7.42e-17' χ2 p-value for Mo17 x B73: '2.79e-09' Biased in favor of strain: 'B73'
GRMZM2G074531	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.5418 x 10^-3	566	225	393	516	71.55%	56.77%	791	909	RefGen V2	χ2 p-value for B73 x Mo17: '.0035418' χ2 p-value for Mo17 x B73: '2.41e-10' Biased in favor of strain: 'B73'
GRMZM2G074530	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.07117 x 10^-2	536	228	284	485	70.16%	63.07%	764	769	RefGen V2	χ2 p-value for B73 x Mo17: '.0407117' χ2 p-value for Mo17 x B73: '.0343098' Biased in favor of strain: ''
GRMZM2G074530	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.426982 x 10^-1	255	201	152	169	55.92%	52.65%	456	321	RefGen V2	χ2 p-value for B73 x Mo17: '.0114459' χ2 p-value for Mo17 x B73: '.3426982' Biased in favor of strain: ''
GRMZM2G074517	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.7119 x 10^-3	302	370	268	351	44.94%	56.70%	672	619	RefGen V2	χ2 p-value for B73 x Mo17: '.0087119' χ2 p-value for Mo17 x B73: '.0008498' Biased in favor of strain: 'Mo17'
GRMZM2G074517	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.208 x 10^-4	1157	426	443	713	73.09%	61.68%	1583	1156	RefGen V2	χ2 p-value for B73 x Mo17: '5.95e-08' χ2 p-value for Mo17 x B73: '.0003208' Biased in favor of strain: 'B73'
GRMZM2G074514	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.192784 x 10^-1	130	81	73	248	61.61%	77.26%	211	321	RefGen V2	χ2 p-value for B73 x Mo17: '.1192784' χ2 p-value for Mo17 x B73: '.0000568' Biased in favor of strain: ''
GRMZM2G074514	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.28217 x 10^-2	148	210	162	210	41.34%	56.45%	358	372	RefGen V2	χ2 p-value for B73 x Mo17: '.0010499' χ2 p-value for Mo17 x B73: '.0128217' Biased in favor of strain: 'Mo17'
GRMZM2G074501	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.075 x 10^-4	19	2	28	6	90.48%	17.65%	21	34	RefGen V2	χ2 p-value for B73 x Mo17: '.0002075' χ2 p-value for Mo17 x B73: '.0001613' Biased in favor of strain: 'B73'
GRMZM2G074501	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G074496	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	0	10	0	100.00%	0.00%	8	10	RefGen V2	χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '7.74e-06' Biased in favor of strain: ''
GRMZM2G074496	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.97 x 10^-9	36	0	36	0	100.00%	0.00%	36	36	RefGen V2	χ2 p-value for B73 x Mo17: '1.97e-09' χ2 p-value for Mo17 x B73: '1.97e-09' Biased in favor of strain: 'B73'
GRMZM2G074489	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.514119 x 10^-1	74	49	56	58	60.16%	50.88%	123	114	RefGen V2	χ2 p-value for B73 x Mo17: '.0241852' χ2 p-value for Mo17 x B73: '.8514119' Biased in favor of strain: ''
GRMZM2G074489	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.402683 x 10^-1	30	18	32	20	62.50%	38.46%	48	52	RefGen V2	χ2 p-value for B73 x Mo17: '.5402683' χ2 p-value for Mo17 x B73: '.000016' Biased in favor of strain: ''
GRMZM2G074479	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.637519 x 10^-1	2035	989	1614	2629	67.29%	61.96%	3024	4243	RefGen V2	χ2 p-value for B73 x Mo17: '.4637519' χ2 p-value for Mo17 x B73: '7.90e-11' Biased in favor of strain: ''
GRMZM2G074479	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.166 x 10^-4	1526	1046	1156	978	59.33%	45.83%	2572	2134	RefGen V2	χ2 p-value for B73 x Mo17: '2.94e-21' χ2 p-value for Mo17 x B73: '.0001166' Biased in favor of strain: 'B73'
GRMZM2G074472	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	3	1	0	25.00%	0.00%	4	1	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G074472	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G074466	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.96 x 10^-5	35	76	24	60	31.53%	71.43%	111	84	RefGen V2	χ2 p-value for B73 x Mo17: '.0000996' χ2 p-value for Mo17 x B73: '.0000857' Biased in favor of strain: 'Mo17'
GRMZM2G074466	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.609673 x 10^-1	10	18	10	33	35.71%	76.74%	28	43	RefGen V2	χ2 p-value for B73 x Mo17: '.0005119' χ2 p-value for Mo17 x B73: '.1609673' Biased in favor of strain: ''
GRMZM2G074462	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.72 x 10^-22	286	23	194	34	92.56%	14.91%	309	228	RefGen V2	χ2 p-value for B73 x Mo17: '4.72e-22' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G074462	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.668543 x 10^-1	27	2	10	7	93.10%	41.18%	29	17	RefGen V2	χ2 p-value for B73 x Mo17: '3.44e-06' χ2 p-value for Mo17 x B73: '.4668543' Biased in favor of strain: ''
GRMZM2G074454	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.19 x 10^-13	804	424	675	431	65.47%	38.97%	1228	1106	RefGen V2	χ2 p-value for B73 x Mo17: '2.13e-27' χ2 p-value for Mo17 x B73: '2.19e-13' Biased in favor of strain: 'B73'
GRMZM2G074454	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.05 x 10^-19	495	93	381	336	84.18%	46.86%	588	717	RefGen V2	χ2 p-value for B73 x Mo17: '2.05e-19' χ2 p-value for Mo17 x B73: '2.33e-29' Biased in favor of strain: 'B73'
GRMZM2G074436	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.40974 x 10^-2	213	59	102	149	78.31%	59.36%	272	251	RefGen V2	χ2 p-value for B73 x Mo17: '.0000464' χ2 p-value for Mo17 x B73: '.0140974' Biased in favor of strain: ''
GRMZM2G074436	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.3412 x 10^-3	217	137	165	119	61.30%	41.90%	354	284	RefGen V2	χ2 p-value for B73 x Mo17: '.0000212' χ2 p-value for Mo17 x B73: '.0063412' Biased in favor of strain: 'B73'
GRMZM2G074427	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.726433 x 10^-1	47	56	51	44	45.63%	46.32%	103	95	RefGen V2	χ2 p-value for B73 x Mo17: '.3751886' χ2 p-value for Mo17 x B73: '.4726433' Biased in favor of strain: ''
GRMZM2G074427	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.02 x 10^-15	75	359	103	480	17.28%	82.33%	434	583	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.02e-15' Biased in favor of strain: 'Mo17'
GRMZM2G074423	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.66902 x 10^-2	262	84	130	215	75.72%	62.32%	346	345	RefGen V2	χ2 p-value for B73 x Mo17: '.0003526' χ2 p-value for Mo17 x B73: '.0866902' Biased in favor of strain: ''
GRMZM2G074423	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.9118 x 10^-3	49	26	11	39	65.33%	78.00%	75	50	RefGen V2	χ2 p-value for B73 x Mo17: '.0079118' χ2 p-value for Mo17 x B73: '.000075' Biased in favor of strain: ''
GRMZM2G074414	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.43 x 10^-5	134	206	109	211	39.41%	65.94%	340	320	RefGen V2	χ2 p-value for B73 x Mo17: '.0000943' χ2 p-value for Mo17 x B73: '1.18e-08' Biased in favor of strain: 'Mo17'
GRMZM2G074414	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.81 x 10^-8	130	152	74	298	46.10%	80.11%	282	372	RefGen V2	χ2 p-value for B73 x Mo17: '2.36e-13' χ2 p-value for Mo17 x B73: '3.81e-08' Biased in favor of strain: 'Mo17'
GRMZM2G074404	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1874	454	1186	1134	80.50%	48.88%	2328	2320	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G074404	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1175	494	1071	478	70.40%	30.86%	1669	1549	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G074401	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.38 x 10^-8	432	273	377	243	61.28%	39.19%	705	620	RefGen V2	χ2 p-value for B73 x Mo17: '2.12e-09' χ2 p-value for Mo17 x B73: '7.38e-08' Biased in favor of strain: 'B73'
GRMZM2G074401	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.976007 x 10^-1	637	296	628	365	68.27%	36.76%	933	993	RefGen V2	χ2 p-value for B73 x Mo17: '.2976007' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G074386	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.3481 x 10^-3	561	224	246	350	71.46%	58.72%	785	596	RefGen V2	χ2 p-value for B73 x Mo17: '.0043481' χ2 p-value for Mo17 x B73: '.0000391' Biased in favor of strain: 'B73'
GRMZM2G074386	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.576725 x 10^-1	297	229	178	177	56.46%	49.86%	526	355	RefGen V2	χ2 p-value for B73 x Mo17: '.0030274' χ2 p-value for Mo17 x B73: '.9576725' Biased in favor of strain: ''
GRMZM2G074381	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.562984 x 10^-1	40	22	55	49	64.52%	47.12%	62	104	RefGen V2	χ2 p-value for B73 x Mo17: '.0222541' χ2 p-value for Mo17 x B73: '.5562984' Biased in favor of strain: ''
GRMZM2G074381	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.09 x 10^-5	72	122	45	178	37.11%	79.82%	194	223	RefGen V2	χ2 p-value for B73 x Mo17: '2.50e-18' χ2 p-value for Mo17 x B73: '.0000309' Biased in favor of strain: 'Mo17'
GRMZM2G074377	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.697914 x 10^-1	28	16	33	16	63.64%	32.65%	44	49	RefGen V2	χ2 p-value for B73 x Mo17: '.6697914' χ2 p-value for Mo17 x B73: '4.40e-07' Biased in favor of strain: ''
GRMZM2G074377	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.23 x 10^-16	262	79	249	98	76.83%	28.24%	341	347	RefGen V2	χ2 p-value for B73 x Mo17: '3.77e-23' χ2 p-value for Mo17 x B73: '5.23e-16' Biased in favor of strain: 'B73'
GRMZM2G074373	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.8924 x 10^-3	176	111	175	125	61.32%	41.67%	287	300	RefGen V2	χ2 p-value for B73 x Mo17: '.0001246' χ2 p-value for Mo17 x B73: '.0038924' Biased in favor of strain: 'B73'
GRMZM2G074373	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.343738 x 10^-1	214	95	125	177	69.26%	58.61%	309	302	RefGen V2	χ2 p-value for B73 x Mo17: '.3343738' χ2 p-value for Mo17 x B73: '.0029748' Biased in favor of strain: ''
GRMZM2G074361	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G074361	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.772089 x 10^-1	100	66	90	76	60.24%	45.78%	166	166	RefGen V2	χ2 p-value for B73 x Mo17: '.0083173' χ2 p-value for Mo17 x B73: '.2772089' Biased in favor of strain: ''
GRMZM2G074351	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.182 x 10^-4	63	21	56	22	75.00%	28.21%	84	78	RefGen V2	χ2 p-value for B73 x Mo17: '4.59e-06' χ2 p-value for Mo17 x B73: '.0001182' Biased in favor of strain: 'B73'
GRMZM2G074351	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.21671 x 10^-2	29	6	19	17	82.86%	47.22%	35	36	RefGen V2	χ2 p-value for B73 x Mo17: '.0421671' χ2 p-value for Mo17 x B73: '.0133283' Biased in favor of strain: ''
GRMZM2G074323	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.336079 x 10^-1	9	9	20	19	50.00%	48.72%	18	39	RefGen V2	χ2 p-value for B73 x Mo17: '.1336079' χ2 p-value for Mo17 x B73: '.0174171' Biased in favor of strain: ''
GRMZM2G074323	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.630246 x 10^-1	7	13	6	5	35.00%	45.45%	20	11	RefGen V2	χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.7630246' Biased in favor of strain: ''
GRMZM2G074317	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	986	301	889	310	76.61%	25.85%	1287	1199	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G074317	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.679482 x 10^-1	25	8	15	12	75.76%	44.44%	33	27	RefGen V2	χ2 p-value for B73 x Mo17: '.2679482' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G074282	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7149 x 10^-1	161	96	95	143	62.65%	60.08%	257	238	RefGen V2	χ2 p-value for B73 x Mo17: '.17149' χ2 p-value for Mo17 x B73: '.0312212' Biased in favor of strain: ''
GRMZM2G074282	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.148288 x 10^-1	151	104	90	104	59.22%	53.61%	255	194	RefGen V2	χ2 p-value for B73 x Mo17: '.0032478' χ2 p-value for Mo17 x B73: '.3148288' Biased in favor of strain: ''
GRMZM2G074278	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.13 x 10^-7	278	111	218	125	71.47%	36.44%	389	343	RefGen V2	χ2 p-value for B73 x Mo17: '2.51e-17' χ2 p-value for Mo17 x B73: '5.13e-07' Biased in favor of strain: 'B73'
GRMZM2G074278	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.75 x 10^-11	368	83	293	59	81.60%	16.76%	451	352	RefGen V2	χ2 p-value for B73 x Mo17: '1.75e-11' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G074270	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.160316 x 10^-1	67	29	24	72	69.79%	75.00%	96	96	RefGen V2	χ2 p-value for B73 x Mo17: '.5160316' χ2 p-value for Mo17 x B73: '.0832646' Biased in favor of strain: ''
GRMZM2G074270	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.034603 x 10^-1	46	63	29	57	42.20%	66.28%	109	86	RefGen V2	χ2 p-value for B73 x Mo17: '.1034603' χ2 p-value for Mo17 x B73: '.0025334' Biased in favor of strain: ''
GRMZM2G074254	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.25 x 10^-11	204	42	236	110	82.93%	31.79%	246	346	RefGen V2	χ2 p-value for B73 x Mo17: '5.22e-25' χ2 p-value for Mo17 x B73: '1.25e-11' Biased in favor of strain: 'B73'
GRMZM2G074254	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.27528 x 10^-1	67	36	78	82	65.05%	51.25%	103	160	RefGen V2	χ2 p-value for B73 x Mo17: '.727528' χ2 p-value for Mo17 x B73: '.0000352' Biased in favor of strain: ''
GRMZM2G074252	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.46396 x 10^-1	104	48	45	59	68.42%	56.73%	152	104	RefGen V2	χ2 p-value for B73 x Mo17: '.646396' χ2 p-value for Mo17 x B73: '.0315977' Biased in favor of strain: ''
GRMZM2G074252	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.658029 x 10^-1	26	21	13	19	55.32%	59.38%	47	32	RefGen V2	χ2 p-value for B73 x Mo17: '.4658029' χ2 p-value for Mo17 x B73: '.2888444' Biased in favor of strain: ''
GRMZM2G074248	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.38 x 10^-5	26	1	20	1	96.30%	4.76%	27	21	RefGen V2	χ2 p-value for B73 x Mo17: '1.50e-06' χ2 p-value for Mo17 x B73: '.0000338' Biased in favor of strain: 'B73'
GRMZM2G074248	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G074241	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.82709 x 10^-2	243	91	161	193	72.75%	54.52%	334	354	RefGen V2	χ2 p-value for B73 x Mo17: '.0182709' χ2 p-value for Mo17 x B73: '1.25e-06' Biased in favor of strain: ''
GRMZM2G074241	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.3431 x 10^-3	141	54	98	61	72.31%	38.36%	195	159	RefGen V2	χ2 p-value for B73 x Mo17: '4.66e-10' χ2 p-value for Mo17 x B73: '.0033431' Biased in favor of strain: 'B73'
GRMZM2G074238	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.88 x 10^-13	100	21	124	13	82.64%	9.49%	121	137	RefGen V2	χ2 p-value for B73 x Mo17: '6.88e-13' χ2 p-value for Mo17 x B73: '2.46e-21' Biased in favor of strain: 'B73'
GRMZM2G074238	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	5	2	100.00%	28.57%	1	7	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: ''
GRMZM2G074236	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	3	0	100.00%	0.00%	1	3	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G074236	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.039	30	16	40	14	65.22%	25.93%	46	54	RefGen V2	χ2 p-value for B73 x Mo17: '.039' χ2 p-value for Mo17 x B73: '.0004029' Biased in favor of strain: 'B73'
GRMZM2G074193	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.73846 x 10^-1	42	68	53	56	38.18%	51.38%	110	109	RefGen V2	χ2 p-value for B73 x Mo17: '.013175' χ2 p-value for Mo17 x B73: '.773846' Biased in favor of strain: ''
GRMZM2G074193	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.03004 x 10^-2	11	37	14	59	22.92%	80.82%	48	73	RefGen V2	χ2 p-value for B73 x Mo17: '1.28e-10' χ2 p-value for Mo17 x B73: '.0103004' Biased in favor of strain: ''
GRMZM2G074158	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.54519 x 10^-2	2829	1336	1909	3519	67.92%	64.83%	4165	5428	RefGen V2	χ2 p-value for B73 x Mo17: '.0854519' χ2 p-value for Mo17 x B73: '.0041086' Biased in favor of strain: ''
GRMZM2G074158	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.058328 x 10^-1	1179	756	609	586	60.93%	49.04%	1935	1195	RefGen V2	χ2 p-value for B73 x Mo17: '6.84e-22' χ2 p-value for Mo17 x B73: '.5058328' Biased in favor of strain: ''
GRMZM2G074138	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.501397 x 10^-1	326	307	303	282	51.50%	48.21%	633	585	RefGen V2	χ2 p-value for B73 x Mo17: '.4501397' χ2 p-value for Mo17 x B73: '.3852612' Biased in favor of strain: ''
GRMZM2G074138	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.89011 x 10^-2	105	33	120	60	76.09%	33.33%	138	180	RefGen V2	χ2 p-value for B73 x Mo17: '.0189011' χ2 p-value for Mo17 x B73: '2.38e-21' Biased in favor of strain: ''
GRMZM2G074122	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	524	56	563	131	90.34%	18.88%	580	694	RefGen V2	χ2 p-value for B73 x Mo17: '1.10e-33' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G074122	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	7435	1202	7785	1102	86.08%	12.40%	8637	8887	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G074114	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.78813 x 10^-2	85	60	91	64	58.62%	41.29%	145	155	RefGen V2	χ2 p-value for B73 x Mo17: '.0378813' χ2 p-value for Mo17 x B73: '.0301061' Biased in favor of strain: 'B73'
GRMZM2G074114	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.753009 x 10^-1	29	9	28	43	76.32%	60.56%	38	71	RefGen V2	χ2 p-value for B73 x Mo17: '.2070346' χ2 p-value for Mo17 x B73: '.2753009' Biased in favor of strain: ''
GRMZM2G074107	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.130966 x 10^-1	91	61	82	79	59.87%	49.07%	152	161	RefGen V2	χ2 p-value for B73 x Mo17: '.014961' χ2 p-value for Mo17 x B73: '.8130966' Biased in favor of strain: ''
GRMZM2G074107	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		53	1	4	2	98.15%	33.33%	54	6	RefGen V2	χ2 p-value for B73 x Mo17: '9.23e-07' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G074103	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.754789 x 10^-1	596	352	263	562	62.87%	68.12%	948	825	RefGen V2	χ2 p-value for B73 x Mo17: '.0131214' χ2 p-value for Mo17 x B73: '.3754789' Biased in favor of strain: ''
GRMZM2G074103	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.380975 x 10^-1	501	516	435	501	49.26%	53.53%	1017	936	RefGen V2	χ2 p-value for B73 x Mo17: '.6380975' χ2 p-value for Mo17 x B73: '.030984' Biased in favor of strain: ''
GRMZM2G074102	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.653 x 10^-4	31	3	15	1	91.18%	6.25%	34	16	RefGen V2	χ2 p-value for B73 x Mo17: '1.57e-06' χ2 p-value for Mo17 x B73: '.0004653' Biased in favor of strain: 'B73'
GRMZM2G074102	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	4	4	6	50.00%	60.00%	8	10	RefGen V2	χ2 p-value for B73 x Mo17: '.3173024' χ2 p-value for Mo17 x B73: '.6547207' Biased in favor of strain: ''
GRMZM2G074099	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	9	2	2	25.00%	50.00%	12	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0021995' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G074099	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	0	8	3	100.00%	27.27%	7	11	RefGen V2	χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.131668' Biased in favor of strain: ''
GRMZM2G074097	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.0 x 10^-30	514	208	1069	325	71.19%	23.31%	722	1394	RefGen V2	χ2 p-value for B73 x Mo17: '4.79e-30' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G074097	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.16532 x 10^-2	44	8	79	113	84.62%	58.85%	52	192	RefGen V2	χ2 p-value for B73 x Mo17: '.00604' χ2 p-value for Mo17 x B73: '.0216532' Biased in favor of strain: ''

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