Displaying data sets 2401 - 2500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G64210 AOX2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64210 AOX2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G64210 AOX2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.19912'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G64210 AOX2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.68325'
Avg. embryo expression (LCM): '0'
AT5G64210 AOX2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64210 AOX2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64200 SC35 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.551 x 10-3 94 20 82.46% 114 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64200 SC35 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 83 35 53 89 70.34% 62.68% 118 142 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.280245'
Avg. expression score for this sample: '389.838'
Avg. expression score in LCM sample: '174.582'
Tissue used: 'pure endosperm, no chalazal'
AT5G64200 SC35 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.6559 x 10-2 109 25 39 75 81.34% 65.79% 134 114 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.280245'
Avg. expression score for this sample: '237.557'
Avg. expression score in LCM sample: '174.582'
Tissue used: 'full endosperm'
AT5G64200 SC35 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.51888 x 10-1 95 95 51 36 50.00% 41.38% 190 87 TAIR8 Avg. embryo expression (dissected): '607.565'
Avg. embryo expression (LCM): '388.55'
AT5G64200 SC35 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.78503 x 10-1 22 5 81.48% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64200 SC35 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.02389 x 10-1 67 27 71.28% 94 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.54833 x 10-1 81 2 97.59% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.5449 x 10-2 6 1 0 10 85.71% 100.00% 7 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.9e-32'
Avg. expression score for this sample: '205.004'
Avg. expression score in LCM sample: '4.54166'
Tissue used: 'pure endosperm, no chalazal'
AT5G64190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 149 3 2 175 98.03% 98.87% 152 177 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.9e-32'
Avg. expression score for this sample: '1610.91'
Avg. expression score in LCM sample: '4.54166'
Tissue used: 'full endosperm'
AT5G64190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28571 x 10-1 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Avg. embryo expression (dissected): '23.4317'
Avg. embryo expression (LCM): '7.7612'
AT5G64190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.11838 x 10-1 36 1 97.30% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.593 46 1 97.87% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.95471 x 10-1 35 2 94.59% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.24503 x 10-1 9 2 0 6 81.82% 100.00% 11 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004013'
Avg. expression score for this sample: '76.3594'
Avg. expression score in LCM sample: '26.9119'
Tissue used: 'pure endosperm, no chalazal'
AT5G64180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.8235 x 10-2 13 3 0 20 81.25% 100.00% 16 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004013'
Avg. expression score for this sample: '155.067'
Avg. expression score in LCM sample: '26.9119'
Tissue used: 'full endosperm'
AT5G64180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28571 x 10-1 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '36.8123'
Avg. embryo expression (LCM): '35.3775'
AT5G64180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.5954 x 10-1 19 6 76.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3 x 10-23 324 20 94.19% 344 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.66721 x 10-1 170 112 80 239 60.28% 74.92% 282 319 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02013'
Avg. expression score for this sample: '242.353'
Avg. expression score in LCM sample: '68.3012'
Tissue used: 'pure endosperm, no chalazal'
AT5G64170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.155 x 10-3 262 91 111 287 74.22% 72.11% 353 398 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02013'
Avg. expression score for this sample: '309.853'
Avg. expression score in LCM sample: '68.3012'
Tissue used: 'full endosperm'
AT5G64170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.52812 x 10-1 115 160 49 67 41.82% 57.76% 275 116 TAIR8 Avg. embryo expression (dissected): '289.97'
Avg. embryo expression (LCM): '144.373'
AT5G64170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.32097 x 10-1 61 28 68.54% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.7 x 10-5 184 37 83.26% 221 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '152.712'
Avg. expression score in LCM sample: '86.1445'
Tissue used: 'pure endosperm, no chalazal'
AT5G64160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '220.423'
Avg. expression score in LCM sample: '86.1445'
Tissue used: 'full endosperm'
AT5G64160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '286.052'
Avg. embryo expression (LCM): '265.89'
AT5G64160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.30074 x 10-1 107 37 74.31% 144 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.59097 x 10-1 25 11 12 46 69.44% 79.31% 36 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.142286'
Avg. expression score for this sample: '57.3756'
Avg. expression score in LCM sample: '23.0757'
Tissue used: 'pure endosperm, no chalazal'
AT5G64150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.3398 x 10-1 57 30 24 76 65.52% 76.00% 87 100 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.142286'
Avg. expression score for this sample: '88.8354'
Avg. expression score in LCM sample: '23.0757'
Tissue used: 'full endosperm'
AT5G64150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.10159 x 10-1 54 69 11 23 43.90% 67.65% 123 34 TAIR8 Avg. embryo expression (dissected): '132.172'
Avg. embryo expression (LCM): '118.967'
AT5G64150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.98471 x 10-1 14 6 70.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.62 x 10-4 161 25 86.56% 186 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64140 RPS28 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64140 RPS28 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '430.728'
Avg. expression score in LCM sample: '162.97'
Tissue used: 'pure endosperm, no chalazal'
AT5G64140 RPS28 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '495.407'
Avg. expression score in LCM sample: '162.97'
Tissue used: 'full endosperm'
AT5G64140 RPS28 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1256.36'
Avg. embryo expression (LCM): '2141.26'
AT5G64140 RPS28 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64140 RPS28 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.34944 x 10-1 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '646.135'
Avg. expression score in LCM sample: '284.346'
Tissue used: 'pure endosperm, no chalazal'
AT5G64130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 1 5 7 85.71% 58.33% 7 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1386.53'
Avg. expression score in LCM sample: '284.346'
Tissue used: 'full endosperm'
AT5G64130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 0 2 0 100.00% 0.00% 3 2 TAIR8 Avg. embryo expression (dissected): '340.22'
Avg. embryo expression (LCM): '811.033'
AT5G64130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.30435 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 24 6 80.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G64120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.11566'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G64120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.579328'
Avg. embryo expression (LCM): '0'
AT5G64120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 13 1 92.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64110 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G64110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G64110 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G64110 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64110 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.207287'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G64100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G64100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G64100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64100 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.21128 x 10-1 92 36 71.88% 128 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.16842 x 10-1 16 14 10 44 53.33% 81.48% 30 54 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.075979'
Avg. expression score for this sample: '231.192'
Avg. expression score in LCM sample: '137.19'
Tissue used: 'pure endosperm, no chalazal'
AT5G64090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.4584 x 10-2 20 10 15 68 66.67% 81.93% 30 83 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.075979'
Avg. expression score for this sample: '257.5'
Avg. expression score in LCM sample: '137.19'
Tissue used: 'full endosperm'
AT5G64090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 16 17 5 7 48.48% 58.33% 33 12 TAIR8 Avg. embryo expression (dissected): '172.111'
Avg. embryo expression (LCM): '162.546'
AT5G64090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.92776 x 10-1 29 6 82.86% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.99773 x 10-1 77 18 81.05% 95 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64080 XYP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.304 x 10-3 29 4 87.88% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64080 XYP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.442128'
Avg. expression score for this sample: '249.759'
Avg. expression score in LCM sample: '29.2195'
Tissue used: 'pure endosperm, no chalazal'
AT5G64080 XYP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.42128 x 10-1 14 4 20 20 77.78% 50.00% 18 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.442128'
Avg. expression score for this sample: '926.791'
Avg. expression score in LCM sample: '29.2195'
Tissue used: 'full endosperm'
AT5G64080 XYP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 1 5 1 1 16.67% 50.00% 6 2 TAIR8 Avg. embryo expression (dissected): '1882.18'
Avg. embryo expression (LCM): '1192.7'
AT5G64080 XYP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.11864 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64080 XYP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64070 PI-4KBETA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.94118 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64070 PI-4KBETA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.44444 x 10-1 1 0 0 4 100.00% 100.00% 1 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.046584'
Avg. expression score for this sample: '69.7894'
Avg. expression score in LCM sample: '55.9991'
Tissue used: 'pure endosperm, no chalazal'
AT5G64070 PI-4KBETA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.30769 x 10-1 3 0 0 4 100.00% 100.00% 3 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.046584'
Avg. expression score for this sample: '146.074'
Avg. expression score in LCM sample: '55.9991'
Tissue used: 'full endosperm'
AT5G64070 PI-4KBETA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 0 1 0.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '99.9115'
Avg. embryo expression (LCM): '73.7565'
AT5G64070 PI-4KBETA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64070 PI-4KBETA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.25 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64060 NAC103 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.02295 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64060 NAC103 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 2 0.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '11.8659'
Avg. expression score in LCM sample: '3.5569'
Tissue used: 'pure endosperm, no chalazal'
AT5G64060 NAC103 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 3 3 50.00% 50.00% 2 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '17.3922'
Avg. expression score in LCM sample: '3.5569'
Tissue used: 'full endosperm'
AT5G64060 NAC103 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.14675'
Avg. embryo expression (LCM): '6.07835'
AT5G64060 NAC103 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.58242 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64060 NAC103 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.61538 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64050 ERS endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64050 ERS endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.2378'
Avg. expression score in LCM sample: '23.2374'
Tissue used: 'pure endosperm, no chalazal'
AT5G64050 ERS endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '34.0538'
Avg. expression score in LCM sample: '23.2374'
Tissue used: 'full endosperm'
AT5G64050 ERS embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '59.6819'
Avg. embryo expression (LCM): '94.5786'