Displaying data sets 24701 - 24800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G24440 CID13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.68192 x 10-1 30 83 26.55% 113 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24440 CID13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.6667 x 10-2 28 0 100.00% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 181 91 81 161 66.54% 66.53% 272 242 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0001'
Avg. expression score for this sample: '164.11'
Avg. expression score in LCM sample: '67.8603'
Tissue used: 'pure endosperm, no chalazal'
AT5G24430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.1 x 10-6 282 86 147 482 76.63% 76.63% 368 629 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0001'
Avg. expression score for this sample: '169.916'
Avg. expression score in LCM sample: '67.8603'
Tissue used: 'full endosperm'
AT5G24430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.06295 x 10-1 45 43 21 24 51.14% 53.33% 88 45 TAIR8 Avg. embryo expression (dissected): '69.4819'
Avg. embryo expression (LCM): '34.6742'
AT5G24430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.11243 x 10-1 66 18 78.57% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.1 x 10-11 655 113 85.29% 768 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6 x 10-19 513 53 90.64% 566 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24420 PGL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.48187'
Avg. expression score in LCM sample: '8.4807'
Tissue used: 'pure endosperm, no chalazal'
AT5G24420 PGL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 2 0 2 60.00% 100.00% 5 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.61665'
Avg. expression score in LCM sample: '8.4807'
Tissue used: 'full endosperm'
AT5G24420 PGL5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '2.07217'
AT5G24420 PGL5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24420 PGL5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.765 x 10-3 49 1 98.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24420 PGL5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.80916 x 10-1 3 8 27.27% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24410 PGL4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.54545 x 10-1 4 0 0 2 100.00% 100.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.8e-08'
Avg. expression score for this sample: '20.7157'
Avg. expression score in LCM sample: '6.79044'
Tissue used: 'pure endosperm, no chalazal'
AT5G24410 PGL4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.4 x 10-7 18 0 0 42 100.00% 100.00% 18 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.8e-08'
Avg. expression score for this sample: '56.8295'
Avg. expression score in LCM sample: '6.79044'
Tissue used: 'full endosperm'
AT5G24410 PGL4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.71763'
Avg. embryo expression (LCM): '0'
AT5G24410 PGL4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24410 PGL4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24410 PGL4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 26 0 100.00% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24400 EMB2024 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 57 17 27 28 77.03% 50.91% 74 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.375796'
Avg. expression score for this sample: '179.708'
Avg. expression score in LCM sample: '102.709'
Tissue used: 'pure endosperm, no chalazal'
AT5G24400 EMB2024 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.99609 x 10-1 263 50 138 168 84.03% 54.90% 313 306 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.375796'
Avg. expression score for this sample: '297.523'
Avg. expression score in LCM sample: '102.709'
Tissue used: 'full endosperm'
AT5G24400 EMB2024 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.72814 x 10-1 39 25 20 11 60.94% 35.48% 64 31 TAIR8 Avg. embryo expression (dissected): '241.773'
Avg. embryo expression (LCM): '234.029'
AT5G24400 EMB2024 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.5426 x 10-2 19 17 52.78% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24400 EMB2024 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2 x 10-5 148 126 54.01% 274 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24400 EMB2024 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.1 x 10-29 477 32 93.71% 509 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '13.1757'
Avg. expression score in LCM sample: '16.4764'
Tissue used: 'pure endosperm, no chalazal'
AT5G24390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 1 3 3 85.71% 50.00% 7 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '23.0949'
Avg. expression score in LCM sample: '16.4764'
Tissue used: 'full endosperm'
AT5G24390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.25741'
Avg. embryo expression (LCM): '1.13027'
AT5G24390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.57143 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24380 YSL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.10044 x 10-1 20 14 15 26 58.82% 63.41% 34 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003849'
Avg. expression score for this sample: '207.333'
Avg. expression score in LCM sample: '34.7018'
Tissue used: 'pure endosperm, no chalazal'
AT5G24380 YSL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.69 x 10-4 116 51 41 207 69.46% 83.47% 167 248 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003849'
Avg. expression score for this sample: '550.652'
Avg. expression score in LCM sample: '34.7018'
Tissue used: 'full endosperm'
AT5G24380 YSL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.89073 x 10-1 13 10 2 3 56.52% 60.00% 23 5 TAIR8 Avg. embryo expression (dissected): '56.1801'
Avg. embryo expression (LCM): '28.0559'
AT5G24380 YSL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.86074 x 10-1 25 5 83.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24380 YSL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.63256 x 10-1 57 16 78.08% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24380 YSL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.2 x 10-5 98 8 92.45% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.891877'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G24370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.05861'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G24370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.29467'
Avg. embryo expression (LCM): '0'
AT5G24370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24360 IRE1-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.31873 x 10-1 119 89 49 193 57.21% 79.75% 208 242 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000068'
Avg. expression score for this sample: '36.6431'
Avg. expression score in LCM sample: '34.5548'
Tissue used: 'pure endosperm, no chalazal'
AT5G24360 IRE1-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.4 x 10-5 302 138 124 489 68.64% 79.77% 440 613 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000068'
Avg. expression score for this sample: '67.5146'
Avg. expression score in LCM sample: '34.5548'
Tissue used: 'full endosperm'
AT5G24360 IRE1-1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.2136 x 10-1 129 149 31 44 46.40% 58.67% 278 75 TAIR8 Avg. embryo expression (dissected): '44.8204'
Avg. embryo expression (LCM): '36.2692'
AT5G24360 IRE1-1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.9708 x 10-2 78 16 82.98% 94 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24360 IRE1-1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0 x 10-8 776 447 63.45% 1223 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24360 IRE1-1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.672 x 10-3 746 198 79.03% 944 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24355 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.01979'
Avg. expression score in LCM sample: '8.62768'
Tissue used: 'pure endosperm, no chalazal'
AT5G24355 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '8.62768'
Tissue used: 'full endosperm'
AT5G24355 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G24355 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24355 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 91 3.19% 94 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24355 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0303 x 10-2 32 0 100.00% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24352 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 2 5 100.00% 71.43% 1 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.130014'
Avg. expression score for this sample: '3.68226'
Avg. expression score in LCM sample: '5.96735'
Tissue used: 'pure endosperm, no chalazal'
AT5G24352 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.7826 x 10-2 5 0 0 8 100.00% 100.00% 5 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.130014'
Avg. expression score for this sample: '3.52999'
Avg. expression score in LCM sample: '5.96735'
Tissue used: 'full endosperm'
AT5G24352 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '3.27668'
Avg. embryo expression (LCM): '2.54939'
AT5G24352 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24352 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.58699 x 10-1 8 4 66.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24352 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 13 2 86.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.94402 x 10-1 30 6 10 24 83.33% 70.59% 36 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.360863'
Avg. expression score for this sample: '48.3168'
Avg. expression score in LCM sample: '48.9735'
Tissue used: 'pure endosperm, no chalazal'
AT5G24350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.80811 x 10-1 97 28 56 84 77.60% 60.00% 125 140 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.360863'
Avg. expression score for this sample: '82.7003'
Avg. expression score in LCM sample: '48.9735'
Tissue used: 'full endosperm'
AT5G24350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.09357 x 10-1 30 21 10 8 58.82% 44.44% 51 18 TAIR8 Avg. embryo expression (dissected): '61.6899'
Avg. embryo expression (LCM): '47.5342'
AT5G24350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 13 6 68.42% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.8126 x 10-2 167 51 76.61% 218 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.9 x 10-16 289 18 94.14% 307 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '129.843'
Avg. expression score in LCM sample: '78.0165'
Tissue used: 'pure endosperm, no chalazal'
AT5G24340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '233.399'
Avg. expression score in LCM sample: '78.0165'
Tissue used: 'full endosperm'
AT5G24340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '132.513'
Avg. embryo expression (LCM): '109.674'
AT5G24340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24330 ATXR6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '28.1056'
Avg. expression score in LCM sample: '9.70062'
Tissue used: 'pure endosperm, no chalazal'
AT5G24330 ATXR6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '16.5439'
Avg. expression score in LCM sample: '9.70062'
Tissue used: 'full endosperm'
AT5G24330 ATXR6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Avg. embryo expression (dissected): '87.4218'
Avg. embryo expression (LCM): '140.807'
AT5G24330 ATXR6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24330 ATXR6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24330 ATXR6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '244.897'
Avg. expression score in LCM sample: '116.701'
Tissue used: 'pure endosperm, no chalazal'
AT5G24320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '422.424'
Avg. expression score in LCM sample: '116.701'
Tissue used: 'full endosperm'
AT5G24320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '410.814'
Avg. embryo expression (LCM): '284.05'
AT5G24320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24318 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.67641 x 10-1 200 143 103 280 58.31% 73.11% 343 383 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.189398'
Avg. expression score for this sample: '115.68'
Avg. expression score in LCM sample: '28.9402'
Tissue used: 'pure endosperm, no chalazal'
AT5G24318 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5524 x 10-2 175 94 29 176 65.06% 85.85% 269 205 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.189398'
Avg. expression score for this sample: '51.9125'
Avg. expression score in LCM sample: '28.9402'
Tissue used: 'full endosperm'
AT5G24318 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.6632 x 10-1 131 142 27 78 47.99% 74.29% 273 105 TAIR8 Avg. embryo expression (dissected): '100.487'
Avg. embryo expression (LCM): '25.4562'
AT5G24318 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.84012 x 10-1 39 18 68.42% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24318 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.82709 x 10-1 110 37 74.83% 147 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24318 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.1 x 10-17 267 25 91.44% 292 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24316 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.5702 x 10-2 284 180 193 346 61.21% 64.19% 464 539 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.489986'
Avg. expression score for this sample: '533.292'
Avg. expression score in LCM sample: '239.547'
Tissue used: 'pure endosperm, no chalazal'
AT5G24316 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.168 x 10-2 1007 385 454 875 72.34% 65.84% 1392 1329 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.489986'
Avg. expression score for this sample: '980.916'
Avg. expression score in LCM sample: '239.547'
Tissue used: 'full endosperm'
AT5G24316 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.54732 x 10-1 16 7 7 8 69.57% 53.33% 23 15 TAIR8 Avg. embryo expression (dissected): '32.578'
Avg. embryo expression (LCM): '2.52427'
AT5G24316 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.95478 x 10-1 207 117 63.89% 324 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24316 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.662 x 10-3 694 416 62.52% 1110 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24316 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.16324 x 10-1 2130 993 68.20% 3123 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24314 PTAC7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.04003 x 10-1 175 89 76 99 66.29% 56.57% 264 175 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.507204'
Avg. expression score for this sample: '466.8'
Avg. expression score in LCM sample: '53.4122'
Tissue used: 'pure endosperm, no chalazal'
AT5G24314 PTAC7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.1016 x 10-2 320 99 160 304 76.37% 65.52% 419 464 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.507204'
Avg. expression score for this sample: '594.465'
Avg. expression score in LCM sample: '53.4122'
Tissue used: 'full endosperm'