GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G077960	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.76 x 10^-14	500	160	256	111	75.76%	30.25%	660	367	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.76e-14' Biased in favor of strain: 'B73'
GRMZM2G077960	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1053	221	741	734	82.65%	49.76%	1274	1475	RefGen V2	χ2 p-value for B73 x Mo17: '1.00e-33' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G077942	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.99251 x 10^-2	177	63	168	178	73.75%	51.45%	240	346	RefGen V2	χ2 p-value for B73 x Mo17: '.0199251' χ2 p-value for Mo17 x B73: '1.90e-09' Biased in favor of strain: ''
GRMZM2G077942	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.8574 x 10^-3	159	115	65	115	58.03%	63.89%	274	180	RefGen V2	χ2 p-value for B73 x Mo17: '.0078574' χ2 p-value for Mo17 x B73: '.0001939' Biased in favor of strain: ''
GRMZM2G077937	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	13	11	6	6	54.17%	50.00%	24	12	RefGen V2	χ2 p-value for B73 x Mo17: '.6830914' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G077937	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G077914	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.024745 x 10^-1	22	5	24	1	81.48%	4.00%	27	25	RefGen V2	χ2 p-value for B73 x Mo17: '.1024745' χ2 p-value for Mo17 x B73: '3.00e-11' Biased in favor of strain: ''
GRMZM2G077914	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.54 x 10^-8	70	1	45	5	98.59%	10.00%	71	50	RefGen V2	χ2 p-value for B73 x Mo17: '2.64e-16' χ2 p-value for Mo17 x B73: '1.54e-08' Biased in favor of strain: 'B73'
GRMZM2G077897	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.1333 x 10^-3	506	300	287	227	62.78%	44.16%	806	514	RefGen V2	χ2 p-value for B73 x Mo17: '3.99e-13' χ2 p-value for Mo17 x B73: '.0081333' Biased in favor of strain: 'B73'
GRMZM2G077897	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.76 x 10^-10	930	285	443	598	76.54%	57.44%	1215	1041	RefGen V2	χ2 p-value for B73 x Mo17: '2.82e-13' χ2 p-value for Mo17 x B73: '2.76e-10' Biased in favor of strain: 'B73'
GRMZM2G077895	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.43062 x 10^-2	12	0	37	0	100.00%	0.00%	12	37	RefGen V2	χ2 p-value for B73 x Mo17: '.0143062' χ2 p-value for Mo17 x B73: '7.81e-18' Biased in favor of strain: ''
GRMZM2G077895	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.36 x 10^-19	124	0	82	0	100.00%	0.00%	124	82	RefGen V2	χ2 p-value for B73 x Mo17: '8.42e-29' χ2 p-value for Mo17 x B73: '1.36e-19' Biased in favor of strain: 'B73'
GRMZM2G077863	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.151 x 10^-3	315	211	252	196	59.89%	43.75%	526	448	RefGen V2	χ2 p-value for B73 x Mo17: '5.77e-06' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: 'B73'
GRMZM2G077863	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.470934 x 10^-1	397	174	175	271	69.53%	60.76%	571	446	RefGen V2	χ2 p-value for B73 x Mo17: '.1470934' χ2 p-value for Mo17 x B73: '.0081663' Biased in favor of strain: ''
GRMZM2G077851	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.658458 x 10^-1	69	25	54	57	73.40%	51.35%	94	111	RefGen V2	χ2 p-value for B73 x Mo17: '.1658458' χ2 p-value for Mo17 x B73: '.0006196' Biased in favor of strain: ''
GRMZM2G077851	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.247558 x 10^-1	88	35	37	29	71.54%	43.94%	123	66	RefGen V2	χ2 p-value for B73 x Mo17: '1.76e-06' χ2 p-value for Mo17 x B73: '.3247558' Biased in favor of strain: ''
GRMZM2G077844	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	3	1	0.00%	25.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G077844	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G077842	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	2	2	6	60.00%	75.00%	5	8	RefGen V2	χ2 p-value for B73 x Mo17: '.7518208' χ2 p-value for Mo17 x B73: '.6170751' Biased in favor of strain: ''
GRMZM2G077842	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.39629 x 10^-1	122	92	113	96	57.01%	45.93%	214	209	RefGen V2	χ2 p-value for B73 x Mo17: '.0402905' χ2 p-value for Mo17 x B73: '.239629' Biased in favor of strain: ''
GRMZM2G077837	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.8011 x 10^-3	516	314	392	322	62.17%	45.10%	830	714	RefGen V2	χ2 p-value for B73 x Mo17: '2.36e-12' χ2 p-value for Mo17 x B73: '.0088011' Biased in favor of strain: 'B73'
GRMZM2G077837	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.140536 x 10^-1	634	244	252	445	72.21%	63.85%	878	697	RefGen V2	χ2 p-value for B73 x Mo17: '.000494' χ2 p-value for Mo17 x B73: '.1140536' Biased in favor of strain: ''
GRMZM2G077823	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.03263 x 10^-2	499	304	243	415	62.14%	63.07%	803	658	RefGen V2	χ2 p-value for B73 x Mo17: '.0065272' χ2 p-value for Mo17 x B73: '.0503263' Biased in favor of strain: ''
GRMZM2G077823	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.68471 x 10^-2	262	383	248	289	40.62%	53.82%	645	537	RefGen V2	χ2 p-value for B73 x Mo17: '1.89e-06' χ2 p-value for Mo17 x B73: '.0768471' Biased in favor of strain: ''
GRMZM2G077797	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	53	27	25	25	66.25%	50.00%	80	50	RefGen V2	χ2 p-value for B73 x Mo17: '.0036504' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G077797	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.614401 x 10^-1	49	18	39	32	73.13%	45.07%	67	71	RefGen V2	χ2 p-value for B73 x Mo17: '.2614401' χ2 p-value for Mo17 x B73: '.0001133' Biased in favor of strain: ''
GRMZM2G077789	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	1	0.00%	100.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G077789	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.54 x 10^-7	0	31	8	43	0.00%	84.31%	31	51	RefGen V2	χ2 p-value for B73 x Mo17: '2.58e-08' χ2 p-value for Mo17 x B73: '9.54e-07' Biased in favor of strain: 'Mo17'
GRMZM2G077780	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.981107 x 10^-1	689	565	563	535	54.94%	48.72%	1254	1098	RefGen V2	χ2 p-value for B73 x Mo17: '.0004624' χ2 p-value for Mo17 x B73: '.3981107' Biased in favor of strain: ''
GRMZM2G077780	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.587613 x 10^-1	584	273	277	476	68.14%	63.21%	857	753	RefGen V2	χ2 p-value for B73 x Mo17: '.3587613' χ2 p-value for Mo17 x B73: '.0444379' Biased in favor of strain: ''
GRMZM2G077769	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1940	324	1060	981	85.69%	48.06%	2264	2041	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G077769	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.51 x 10^-10	489	187	382	228	72.34%	37.38%	676	610	RefGen V2	χ2 p-value for B73 x Mo17: '3.44e-31' χ2 p-value for Mo17 x B73: '4.51e-10' Biased in favor of strain: 'B73'
GRMZM2G077760	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.196886 x 10^-1	198	208	194	147	48.77%	43.11%	406	341	RefGen V2	χ2 p-value for B73 x Mo17: '.6196886' χ2 p-value for Mo17 x B73: '.0109217' Biased in favor of strain: ''
GRMZM2G077760	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.7 x 10^-6	124	116	59	231	51.67%	79.66%	240	290	RefGen V2	χ2 p-value for B73 x Mo17: '8.24e-07' χ2 p-value for Mo17 x B73: '2.70e-06' Biased in favor of strain: 'Mo17'
GRMZM2G077757	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.615001 x 10^-1	348	130	178	327	72.80%	64.75%	478	505	RefGen V2	χ2 p-value for B73 x Mo17: '.0044268' χ2 p-value for Mo17 x B73: '.3615001' Biased in favor of strain: ''
GRMZM2G077757	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.239491 x 10^-1	236	179	173	164	56.87%	48.66%	415	337	RefGen V2	χ2 p-value for B73 x Mo17: '.0051417' χ2 p-value for Mo17 x B73: '.6239491' Biased in favor of strain: ''
GRMZM2G077744	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.850494 x 10^-1	9	5	11	2	64.29%	15.38%	14	13	RefGen V2	χ2 p-value for B73 x Mo17: '.2850494' χ2 p-value for Mo17 x B73: '.0125549' Biased in favor of strain: ''
GRMZM2G077744	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.081794 x 10^-1	16	2	16	23	88.89%	58.97%	18	39	RefGen V2	χ2 p-value for B73 x Mo17: '.0455017' χ2 p-value for Mo17 x B73: '.3081794' Biased in favor of strain: ''
GRMZM2G077669	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.885 x 10^-4	146	35	99	126	80.66%	56.00%	181	225	RefGen V2	χ2 p-value for B73 x Mo17: '.0000649' χ2 p-value for Mo17 x B73: '.0006885' Biased in favor of strain: 'B73'
GRMZM2G077669	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.88 x 10^-5	302	211	306	174	58.87%	36.25%	513	480	RefGen V2	χ2 p-value for B73 x Mo17: '.0000588' χ2 p-value for Mo17 x B73: '1.69e-09' Biased in favor of strain: 'B73'
GRMZM2G077662	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.490962 x 10^-1	262	241	192	215	52.09%	52.83%	503	407	RefGen V2	χ2 p-value for B73 x Mo17: '.3490962' χ2 p-value for Mo17 x B73: '.2542581' Biased in favor of strain: ''
GRMZM2G077662	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.02432 x 10^-2	661	291	299	513	69.43%	63.18%	952	812	RefGen V2	χ2 p-value for B73 x Mo17: '.0702432' χ2 p-value for Mo17 x B73: '.0349238' Biased in favor of strain: ''
GRMZM2G077621	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.141527 x 10^-1	29	14	49	41	67.44%	45.56%	43	90	RefGen V2	χ2 p-value for B73 x Mo17: '.9141527' χ2 p-value for Mo17 x B73: '.0000215' Biased in favor of strain: ''
GRMZM2G077621	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.733217 x 10^-1	12	18	26	38	40.00%	59.38%	30	64	RefGen V2	χ2 p-value for B73 x Mo17: '.2733217' χ2 p-value for Mo17 x B73: '.1336144' Biased in favor of strain: ''
GRMZM2G077615	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.351434 x 10^-1	52	25	35	30	67.53%	46.15%	77	65	RefGen V2	χ2 p-value for B73 x Mo17: '.0020914' χ2 p-value for Mo17 x B73: '.5351434' Biased in favor of strain: ''
GRMZM2G077615	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.169944 x 10^-1	57	27	37	59	67.86%	61.46%	84	96	RefGen V2	χ2 p-value for B73 x Mo17: '.8169944' χ2 p-value for Mo17 x B73: '.2790161' Biased in favor of strain: ''
GRMZM2G077612	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	1		33.33%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G077612	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.126908 x 10^-1	12	9	13	4	57.14%	23.53%	21	17	RefGen V2	χ2 p-value for B73 x Mo17: '.5126908' χ2 p-value for Mo17 x B73: '.029049' Biased in favor of strain: ''
GRMZM2G077607	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.94 x 10^-11	410	216	409	242	65.50%	37.17%	626	651	RefGen V2	χ2 p-value for B73 x Mo17: '8.92e-15' χ2 p-value for Mo17 x B73: '5.94e-11' Biased in favor of strain: 'B73'
GRMZM2G077607	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.92 x 10^-19	1019	167	380	409	85.92%	51.84%	1186	789	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '9.92e-19' Biased in favor of strain: 'B73'
GRMZM2G077596	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.9507 x 10^-3	602	240	414	345	71.50%	45.45%	842	759	RefGen V2	χ2 p-value for B73 x Mo17: '.0029507' χ2 p-value for Mo17 x B73: '2.72e-35' Biased in favor of strain: 'B73'
GRMZM2G077596	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.64 x 10^-21	911	456	848	502	66.64%	37.19%	1367	1350	RefGen V2	χ2 p-value for B73 x Mo17: '8.38e-35' χ2 p-value for Mo17 x B73: '4.64e-21' Biased in favor of strain: 'B73'
GRMZM2G077546	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173105 x 10^-1	17	7	10	15	70.83%	60.00%	24	25	RefGen V2	χ2 p-value for B73 x Mo17: '.0412268' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G077546	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.28 x 10^-11	88	0	32	0	100.00%	0.00%	88	32	RefGen V2	χ2 p-value for B73 x Mo17: '3.28e-11' χ2 p-value for Mo17 x B73: '1.24e-15' Biased in favor of strain: 'B73'
GRMZM2G077541	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.8863 x 10^-3	32	3	27	7	91.43%	20.59%	35	34	RefGen V2	χ2 p-value for B73 x Mo17: '.0018863' χ2 p-value for Mo17 x B73: '1.20e-08' Biased in favor of strain: 'B73'
GRMZM2G077541	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7019 x 10^-3	21	5	30	2	80.77%	6.25%	26	32	RefGen V2	χ2 p-value for B73 x Mo17: '.0017019' χ2 p-value for Mo17 x B73: '7.43e-07' Biased in favor of strain: 'B73'
GRMZM2G077535	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.414806 x 10^-1	8	22	12	13	26.67%	52.00%	30	25	RefGen V2	χ2 p-value for B73 x Mo17: '.0105871' χ2 p-value for Mo17 x B73: '.8414806' Biased in favor of strain: ''
GRMZM2G077535	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	7	7	2	30.00%	22.22%	10	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0139054' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G077531	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.04 x 10^-6	14	28	5	61	33.33%	92.42%	42	66	RefGen V2	χ2 p-value for B73 x Mo17: '4.59e-06' χ2 p-value for Mo17 x B73: '9.04e-06' Biased in favor of strain: 'Mo17'
GRMZM2G077531	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.07 x 10^-4	7	49	21	51	12.50%	70.83%	56	72	RefGen V2	χ2 p-value for B73 x Mo17: '1.99e-08' χ2 p-value for Mo17 x B73: '.000407' Biased in favor of strain: 'Mo17'
GRMZM2G077500	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		16	1	7	0	94.12%	0.00%	17	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0002747' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: ''
GRMZM2G077500	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	1	0	100.00%	0.00%	4	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G077498	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.635524 x 10^-1	34	2	5	5	94.44%	50.00%	36	10	RefGen V2	χ2 p-value for B73 x Mo17: '.000407' χ2 p-value for Mo17 x B73: '.2635524' Biased in favor of strain: ''
GRMZM2G077498	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.1 x 10^-15	41	150	14	178	21.47%	92.71%	191	192	RefGen V2	χ2 p-value for B73 x Mo17: '3.10e-15' χ2 p-value for Mo17 x B73: '2.55e-32' Biased in favor of strain: 'Mo17'
GRMZM2G077495	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	2		50.00%	0	4	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G077495	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	21		91.30%	0	23	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G077490	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.606994 x 10^-1	398	215	186	441	64.93%	70.33%	613	627	RefGen V2	χ2 p-value for B73 x Mo17: '.3606994' χ2 p-value for Mo17 x B73: '.0513554' Biased in favor of strain: ''
GRMZM2G077490	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.603706 x 10^-1	211	129	161	145	62.06%	47.39%	340	306	RefGen V2	χ2 p-value for B73 x Mo17: '8.70e-06' χ2 p-value for Mo17 x B73: '.3603706' Biased in favor of strain: ''
GRMZM2G077466	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	2	0.00%	100.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G077466	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	5	0	5	0.00%	100.00%	5	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0015653' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: ''
GRMZM2G077463	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.599786 x 10^-1	3619	1762	1673	2879	67.26%	63.25%	5381	4552	RefGen V2	χ2 p-value for B73 x Mo17: '.3599786' χ2 p-value for Mo17 x B73: '9.86e-07' Biased in favor of strain: ''
GRMZM2G077463	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.8474 x 10^-3	1243	812	862	983	60.49%	53.28%	2055	1845	RefGen V2	χ2 p-value for B73 x Mo17: '1.95e-21' χ2 p-value for Mo17 x B73: '.0048474' Biased in favor of strain: ''
GRMZM2G077458	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.827832 x 10^-1	112	123	91	93	47.66%	50.54%	235	184	RefGen V2	χ2 p-value for B73 x Mo17: '.4730281' χ2 p-value for Mo17 x B73: '.8827832' Biased in favor of strain: ''
GRMZM2G077458	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.188697 x 10^-1	138	64	86	62	68.32%	41.89%	202	148	RefGen V2	χ2 p-value for B73 x Mo17: '.6188697' χ2 p-value for Mo17 x B73: '1.62e-10' Biased in favor of strain: ''
GRMZM2G077437	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	4	14	100.00%	77.78%	3	18	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.3173106' Biased in favor of strain: ''
GRMZM2G077437	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.9049 x 10^-2	1	25	4	13	3.85%	76.47%	26	17	RefGen V2	χ2 p-value for B73 x Mo17: '2.52e-06' χ2 p-value for Mo17 x B73: '.029049' Biased in favor of strain: 'Mo17'
GRMZM2G077436	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G077436	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	1	1	100.00%	50.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: ''
GRMZM2G077420	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.53137 x 10^-2	392	161	256	391	70.89%	60.43%	553	647	RefGen V2	χ2 p-value for B73 x Mo17: '.0353137' χ2 p-value for Mo17 x B73: '.000769' Biased in favor of strain: ''
GRMZM2G077420	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.6034 x 10^-3	640	548	511	601	53.87%	54.05%	1188	1112	RefGen V2	χ2 p-value for B73 x Mo17: '.0076034' χ2 p-value for Mo17 x B73: '.0069565' Biased in favor of strain: ''
GRMZM2G077415	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.040239 x 10^-1	43	32	30	20	57.33%	40.00%	75	50	RefGen V2	χ2 p-value for B73 x Mo17: '.2040239' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G077415	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.349 x 10^-4	81	16	42	35	83.51%	45.45%	97	77	RefGen V2	χ2 p-value for B73 x Mo17: '.0004349' χ2 p-value for Mo17 x B73: '.0000786' Biased in favor of strain: 'B73'
GRMZM2G077406	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5951 x 10^-3	50	8	31	13	86.21%	29.55%	58	44	RefGen V2	χ2 p-value for B73 x Mo17: '.0015951' χ2 p-value for Mo17 x B73: '1.76e-07' Biased in favor of strain: 'B73'
GRMZM2G077406	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.1236 x 10^-3	47	23	45	14	67.14%	23.73%	70	59	RefGen V2	χ2 p-value for B73 x Mo17: '.0041236' χ2 p-value for Mo17 x B73: '.0000544' Biased in favor of strain: 'B73'
GRMZM2G077404	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.589705 x 10^-1	330	294	224	205	52.88%	47.79%	624	429	RefGen V2	χ2 p-value for B73 x Mo17: '.1495413' χ2 p-value for Mo17 x B73: '.3589705' Biased in favor of strain: ''
GRMZM2G077404	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.11011 x 10^-2	136	46	89	77	74.73%	46.39%	182	166	RefGen V2	χ2 p-value for B73 x Mo17: '.0211011' χ2 p-value for Mo17 x B73: '2.97e-08' Biased in favor of strain: ''
GRMZM2G077401	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.192824 x 10^-1	37	24	18	20	60.66%	52.63%	61	38	RefGen V2	χ2 p-value for B73 x Mo17: '.3192824' χ2 p-value for Mo17 x B73: '.0664574' Biased in favor of strain: ''
GRMZM2G077401	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.30696 x 10^-1	177	173	223	205	50.57%	47.90%	350	428	RefGen V2	χ2 p-value for B73 x Mo17: '.830696' χ2 p-value for Mo17 x B73: '.3842661' Biased in favor of strain: ''
GRMZM2G077389	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.42 x 10^-23	126	1	103	2	99.21%	1.90%	127	105	RefGen V2	χ2 p-value for B73 x Mo17: '1.37e-28' χ2 p-value for Mo17 x B73: '6.42e-23' Biased in favor of strain: 'B73'
GRMZM2G077389	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.40797 x 10^-2	18	3	11	2	85.71%	15.38%	21	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0640797' χ2 p-value for Mo17 x B73: '.0000877' Biased in favor of strain: ''
GRMZM2G077361	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	1		50.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G077361	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	0	0	50.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G077356	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.88 x 10^-18	468	238	582	317	66.29%	35.26%	706	899	RefGen V2	χ2 p-value for B73 x Mo17: '4.88e-18' χ2 p-value for Mo17 x B73: '9.72e-19' Biased in favor of strain: 'B73'
GRMZM2G077356	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.583263 x 10^-1	60	2	19	29	96.77%	60.42%	62	48	RefGen V2	χ2 p-value for B73 x Mo17: '4.93e-07' χ2 p-value for Mo17 x B73: '.3583263' Biased in favor of strain: ''
GRMZM2G077316	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1214	229	542	425	84.13%	43.95%	1443	967	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G077316	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	6761	3024	6959	2689	69.10%	27.87%	9785	9648	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G077307	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1373	546	896	451	71.55%	33.48%	1919	1347	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '7.80e-34' Biased in favor of strain: 'B73'
GRMZM2G077307	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.9 x 10^-14	1749	512	697	954	77.36%	57.78%	2261	1651	RefGen V2	χ2 p-value for B73 x Mo17: '4.23e-27' χ2 p-value for Mo17 x B73: '1.90e-14' Biased in favor of strain: 'B73'
GRMZM2G077293	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.535786 x 10^-1	218	121	124	243	64.31%	66.21%	339	367	RefGen V2	χ2 p-value for B73 x Mo17: '.3566304' χ2 p-value for Mo17 x B73: '.8535786' Biased in favor of strain: ''
GRMZM2G077293	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5815 x 10^-3	146	85	129	83	63.20%	39.15%	231	212	RefGen V2	χ2 p-value for B73 x Mo17: '.0000598' χ2 p-value for Mo17 x B73: '.0015815' Biased in favor of strain: 'B73'

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