GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G079428	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.78796 x 10^-2	320	128	190	317	71.43%	62.52%	448	507	RefGen V2	χ2 p-value for B73 x Mo17: '.032517' χ2 p-value for Mo17 x B73: '.0478796' Biased in favor of strain: ''
GRMZM2G079428	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.643556 x 10^-1	234	163	202	175	58.94%	46.42%	397	377	RefGen V2	χ2 p-value for B73 x Mo17: '.0003661' χ2 p-value for Mo17 x B73: '.1643556' Biased in favor of strain: ''
GRMZM2G079389	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.29 x 10^-13	277	114	230	100	70.84%	30.30%	391	330	RefGen V2	χ2 p-value for B73 x Mo17: '1.68e-16' χ2 p-value for Mo17 x B73: '8.29e-13' Biased in favor of strain: 'B73'
GRMZM2G079389	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.953 x 10^-3	510	204	317	389	71.43%	55.10%	714	706	RefGen V2	χ2 p-value for B73 x Mo17: '.006953' χ2 p-value for Mo17 x B73: '7.03e-11' Biased in favor of strain: 'B73'
GRMZM2G079381	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.28075 x 10^-2	21	3	15	15	87.50%	50.00%	24	30	RefGen V2	χ2 p-value for B73 x Mo17: '.030384' χ2 p-value for Mo17 x B73: '.0528075' Biased in favor of strain: ''
GRMZM2G079381	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.02 x 10^-20	302	57	160	31	84.12%	16.23%	359	191	RefGen V2	χ2 p-value for B73 x Mo17: '3.02e-38' χ2 p-value for Mo17 x B73: '1.02e-20' Biased in favor of strain: 'B73'
GRMZM2G079365	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.43079 x 10^-1	114	105	118	82	52.05%	41.00%	219	200	RefGen V2	χ2 p-value for B73 x Mo17: '.543079' χ2 p-value for Mo17 x B73: '.0109095' Biased in favor of strain: ''
GRMZM2G079365	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.55718 x 10^-2	54	13	37	38	80.60%	50.67%	67	75	RefGen V2	χ2 p-value for B73 x Mo17: '.0155718' χ2 p-value for Mo17 x B73: '.0032886' Biased in favor of strain: ''
GRMZM2G079353	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.020281 x 10^-1	48	7	10	13	87.27%	56.52%	55	23	RefGen V2	χ2 p-value for B73 x Mo17: '.001188' χ2 p-value for Mo17 x B73: '.3020281' Biased in favor of strain: ''
GRMZM2G079353	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.393165 x 10^-1	37	17	16	10	68.52%	38.46%	54	26	RefGen V2	χ2 p-value for B73 x Mo17: '.0064956' χ2 p-value for Mo17 x B73: '.2393165' Biased in favor of strain: ''
GRMZM2G079348	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.36 x 10^-19	82	0	162	10	100.00%	5.81%	82	172	RefGen V2	χ2 p-value for B73 x Mo17: '1.36e-19' χ2 p-value for Mo17 x B73: '4.64e-31' Biased in favor of strain: 'B73'
GRMZM2G079348	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.17304 x 10^-1	63	0	9	13	100.00%	59.09%	63	22	RefGen V2	χ2 p-value for B73 x Mo17: '1.99e-08' χ2 p-value for Mo17 x B73: '.417304' Biased in favor of strain: ''
GRMZM2G079343	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.763076 x 10^-1	52	18	28	26	74.29%	48.15%	70	54	RefGen V2	χ2 p-value for B73 x Mo17: '.1763076' χ2 p-value for Mo17 x B73: '.0038924' Biased in favor of strain: ''
GRMZM2G079343	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.574625 x 10^-1	30	16	15	16	65.22%	51.61%	46	31	RefGen V2	χ2 p-value for B73 x Mo17: '.039' χ2 p-value for Mo17 x B73: '.8574625' Biased in favor of strain: ''
GRMZM2G079342	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.8924 x 10^-3	11	1	27	4	91.67%	12.90%	12	31	RefGen V2	χ2 p-value for B73 x Mo17: '.0038924' χ2 p-value for Mo17 x B73: '.0000361' Biased in favor of strain: 'B73'
GRMZM2G079342	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		20	0	3	1	100.00%	25.00%	20	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0015655' χ2 p-value for Mo17 x B73: '.0770998' Biased in favor of strain: ''
GRMZM2G079323	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	1	14	18	85.71%	56.25%	7	32	RefGen V2	χ2 p-value for B73 x Mo17: '.2850535' χ2 p-value for Mo17 x B73: '.2112994' Biased in favor of strain: ''
GRMZM2G079323	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.887 x 10^-4	91	51	14	42	64.08%	75.00%	142	56	RefGen V2	χ2 p-value for B73 x Mo17: '.0007887' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: ''
GRMZM2G079316	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.482131 x 10^-1	13	20	4	8	39.39%	66.67%	33	12	RefGen V2	χ2 p-value for B73 x Mo17: '.2230175' χ2 p-value for Mo17 x B73: '.2482131' Biased in favor of strain: ''
GRMZM2G079316	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.897067 x 10^-1	22	4	9	17	84.62%	65.38%	26	26	RefGen V2	χ2 p-value for B73 x Mo17: '.0522058' χ2 p-value for Mo17 x B73: '.8897067' Biased in favor of strain: ''
GRMZM2G079308	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.33 x 10^-15	216	21	175	59	91.14%	25.21%	237	234	RefGen V2	χ2 p-value for B73 x Mo17: '1.33e-15' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G079308	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	541	153	555	140	77.95%	20.14%	694	695	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G079306	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.795732 x 10^-1	152	180	161	186	45.78%	53.60%	332	347	RefGen V2	χ2 p-value for B73 x Mo17: '.1243669' χ2 p-value for Mo17 x B73: '.1795732' Biased in favor of strain: ''
GRMZM2G079306	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.491043 x 10^-1	196	78	75	146	71.53%	66.06%	274	221	RefGen V2	χ2 p-value for B73 x Mo17: '.0875172' χ2 p-value for Mo17 x B73: '.8491043' Biased in favor of strain: ''
GRMZM2G079303	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G079303	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	1	0	100.00%	0.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G079290	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	5	5	22	7	50.00%	24.14%	10	29	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0053457' Biased in favor of strain: ''
GRMZM2G079290	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G079263	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.95 x 10^-10	429	110	157	126	79.59%	44.52%	539	283	RefGen V2	χ2 p-value for B73 x Mo17: '1.95e-10' χ2 p-value for Mo17 x B73: '2.74e-15' Biased in favor of strain: 'B73'
GRMZM2G079263	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.8691 x 10^-3	250	49	110	70	83.61%	38.89%	299	180	RefGen V2	χ2 p-value for B73 x Mo17: '3.11e-31' χ2 p-value for Mo17 x B73: '.0028691' Biased in favor of strain: 'B73'
GRMZM2G079257	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1189	671	885	431	63.92%	32.75%	1860	1316	RefGen V2	χ2 p-value for B73 x Mo17: '3.12e-33' χ2 p-value for Mo17 x B73: '6.19e-36' Biased in favor of strain: 'B73'
GRMZM2G079257	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2477	661	1289	1231	78.94%	48.85%	3138	2520	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G079200	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	2	3	13	33.33%	81.25%	3	16	RefGen V2	χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.215925' Biased in favor of strain: ''
GRMZM2G079200	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.87 x 10^-21	130	10	114	9	92.86%	7.32%	140	123	RefGen V2	χ2 p-value for B73 x Mo17: '3.60e-24' χ2 p-value for Mo17 x B73: '2.87e-21' Biased in favor of strain: 'B73'
GRMZM2G079185	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.126908 x 10^-1	12	9	13	6	57.14%	31.58%	21	19	RefGen V2	χ2 p-value for B73 x Mo17: '.5126908' χ2 p-value for Mo17 x B73: '.1082937' Biased in favor of strain: ''
GRMZM2G079185	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G079143	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.840698 x 10^-1	478	219	266	356	68.58%	57.23%	697	622	RefGen V2	χ2 p-value for B73 x Mo17: '.2840698' χ2 p-value for Mo17 x B73: '6.04e-07' Biased in favor of strain: ''
GRMZM2G079143	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.904 x 10^-4	792	657	733	578	54.66%	44.09%	1449	1311	RefGen V2	χ2 p-value for B73 x Mo17: '.0003904' χ2 p-value for Mo17 x B73: '.0000186' Biased in favor of strain: 'B73'
GRMZM2G079127	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.03 x 10^-18	78	0	85	0	100.00%	0.00%	78	85	RefGen V2	χ2 p-value for B73 x Mo17: '1.03e-18' χ2 p-value for Mo17 x B73: '2.98e-20' Biased in favor of strain: 'B73'
GRMZM2G079127	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.56 x 10^-12	98	0	38	0	100.00%	0.00%	98	38	RefGen V2	χ2 p-value for B73 x Mo17: '2.56e-12' χ2 p-value for Mo17 x B73: '2.84e-18' Biased in favor of strain: 'B73'
GRMZM2G079112	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.08 x 10^-14	1514	511	665	902	74.77%	57.56%	2025	1567	RefGen V2	χ2 p-value for B73 x Mo17: '1.07e-14' χ2 p-value for Mo17 x B73: '2.08e-14' Biased in favor of strain: 'B73'
GRMZM2G079112	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.56 x 10^-5	468	273	378	275	63.16%	42.11%	741	653	RefGen V2	χ2 p-value for B73 x Mo17: '7.86e-13' χ2 p-value for Mo17 x B73: '.0000556' Biased in favor of strain: 'B73'
GRMZM2G079109	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.943659 x 10^-1	16	7	23	15	69.57%	39.47%	23	38	RefGen V2	χ2 p-value for B73 x Mo17: '.0605689' χ2 p-value for Mo17 x B73: '.1943659' Biased in favor of strain: ''
GRMZM2G079109	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.502 x 10^-3	32	3	20	17	91.43%	45.95%	35	37	RefGen V2	χ2 p-value for B73 x Mo17: '.0018863' χ2 p-value for Mo17 x B73: '.007502' Biased in favor of strain: 'B73'
GRMZM2G079089	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.325541 x 10^-1	253	152	299	607	62.47%	67.00%	405	906	RefGen V2	χ2 p-value for B73 x Mo17: '.0731236' χ2 p-value for Mo17 x B73: '.8325541' Biased in favor of strain: ''
GRMZM2G079089	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.72611 x 10^-1	913	849	753	788	51.82%	51.14%	1762	1541	RefGen V2	χ2 p-value for B73 x Mo17: '.1273404' χ2 p-value for Mo17 x B73: '.372611' Biased in favor of strain: ''
GRMZM2G079083	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1422	740	1155	608	65.77%	34.49%	2162	1763	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '8.54e-39' Biased in favor of strain: 'B73'
GRMZM2G079083	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1994	512	1212	1247	79.57%	50.71%	2506	2459	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G079080	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G079080	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.32 x 10^-4	135	69	120	72	66.18%	37.50%	204	192	RefGen V2	χ2 p-value for B73 x Mo17: '3.82e-06' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: 'B73'
GRMZM2G079066	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	18	25	15	15	41.86%	50.00%	43	30	RefGen V2	χ2 p-value for B73 x Mo17: '.2857506' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G079066	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	3	4	1	50.00%	20.00%	6	5	RefGen V2	χ2 p-value for B73 x Mo17: '.3864683' χ2 p-value for Mo17 x B73: '.0268567' Biased in favor of strain: ''
GRMZM2G079034	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.327677 x 10^-1	14	4	3	10	77.78%	76.92%	18	13	RefGen V2	χ2 p-value for B73 x Mo17: '.3173186' χ2 p-value for Mo17 x B73: '.4327677' Biased in favor of strain: ''
GRMZM2G079034	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.053805 x 10^-1	5	8	7	4	38.46%	36.36%	13	11	RefGen V2	χ2 p-value for B73 x Mo17: '.4053805' χ2 p-value for Mo17 x B73: '.3657123' Biased in favor of strain: ''
GRMZM2G079031	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.631 x 10^-3	46	21	38	17	68.66%	30.91%	67	55	RefGen V2	χ2 p-value for B73 x Mo17: '.0022563' χ2 p-value for Mo17 x B73: '.004631' Biased in favor of strain: 'B73'
GRMZM2G079031	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.735491 x 10^-1	70	31	39	40	69.31%	50.63%	101	79	RefGen V2	χ2 p-value for B73 x Mo17: '.5735491' χ2 p-value for Mo17 x B73: '.0025018' Biased in favor of strain: ''
GRMZM2G079013	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	2.07 x 10^-14	348	313	395	325	52.65%	45.14%	661	720	RefGen V2	χ2 p-value for B73 x Mo17: '2.07e-14' χ2 p-value for Mo17 x B73: '1.60e-34' Biased in favor of strain: ''
GRMZM2G079013	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.19759 x 10^-2	487	382	423	353	56.04%	45.49%	869	776	RefGen V2	χ2 p-value for B73 x Mo17: '.0003682' χ2 p-value for Mo17 x B73: '.0119759' Biased in favor of strain: 'B73'
GRMZM2G078995	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.09 x 10^-10	67	7	67	12	90.54%	15.19%	74	79	RefGen V2	χ2 p-value for B73 x Mo17: '3.06e-12' χ2 p-value for Mo17 x B73: '6.09e-10' Biased in favor of strain: 'B73'
GRMZM2G078995	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.5784 x 10^-3	38	6	33	7	86.36%	17.50%	44	40	RefGen V2	χ2 p-value for B73 x Mo17: '.0055784' χ2 p-value for Mo17 x B73: '4.21e-11' Biased in favor of strain: 'B73'
GRMZM2G078985	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.137 x 10^-4	155	123	115	457	55.76%	79.90%	278	572	RefGen V2	χ2 p-value for B73 x Mo17: '.0001137' χ2 p-value for Mo17 x B73: '1.93e-11' Biased in favor of strain: 'Mo17'
GRMZM2G078985	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.7701 x 10^-3	196	256	130	336	43.36%	72.10%	452	466	RefGen V2	χ2 p-value for B73 x Mo17: '.0047701' χ2 p-value for Mo17 x B73: '1.39e-21' Biased in favor of strain: 'Mo17'
GRMZM2G078959	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	3	0.00%	100.00%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G078959	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G078941	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.33133 x 10^-2	331	128	224	288	72.11%	56.25%	459	512	RefGen V2	χ2 p-value for B73 x Mo17: '.0133133' χ2 p-value for Mo17 x B73: '5.73e-07' Biased in favor of strain: ''
GRMZM2G078941	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.46 x 10^-5	323	188	246	165	63.21%	40.15%	511	411	RefGen V2	χ2 p-value for B73 x Mo17: '2.34e-09' χ2 p-value for Mo17 x B73: '.0000646' Biased in favor of strain: 'B73'
GRMZM2G078926	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.47 x 10^-6	280	83	164	93	77.13%	36.19%	363	257	RefGen V2	χ2 p-value for B73 x Mo17: '4.65e-25' χ2 p-value for Mo17 x B73: '9.47e-06' Biased in favor of strain: 'B73'
GRMZM2G078926	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.696655 x 10^-1	930	466	509	873	66.62%	63.17%	1396	1382	RefGen V2	χ2 p-value for B73 x Mo17: '.9696655' χ2 p-value for Mo17 x B73: '.0058151' Biased in favor of strain: ''
GRMZM2G078895	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.421 x 10^-4	369	97	176	242	79.18%	57.89%	466	418	RefGen V2	χ2 p-value for B73 x Mo17: '9.91e-09' χ2 p-value for Mo17 x B73: '.0001421' Biased in favor of strain: 'B73'
GRMZM2G078895	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.77 x 10^-23	800	451	821	386	63.95%	31.98%	1251	1207	RefGen V2	χ2 p-value for B73 x Mo17: '5.77e-23' χ2 p-value for Mo17 x B73: '5.74e-36' Biased in favor of strain: 'B73'
GRMZM2G078887	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.69 x 10^-12	920	612	677	441	60.05%	39.45%	1532	1118	RefGen V2	χ2 p-value for B73 x Mo17: '3.57e-15' χ2 p-value for Mo17 x B73: '1.69e-12' Biased in favor of strain: 'B73'
GRMZM2G078887	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.002912 x 10^-1	111	48	66	95	69.81%	59.01%	159	161	RefGen V2	χ2 p-value for B73 x Mo17: '.4002912' χ2 p-value for Mo17 x B73: '.0392144' Biased in favor of strain: ''
GRMZM2G078876	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.57819 x 10^-2	11	0	10	7	100.00%	41.18%	11	17	RefGen V2	χ2 p-value for B73 x Mo17: '.0190169' χ2 p-value for Mo17 x B73: '.0257819' Biased in favor of strain: ''
GRMZM2G078876	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.04876 x 10^-2	87	59	72	34	59.59%	32.08%	146	106	RefGen V2	χ2 p-value for B73 x Mo17: '.0204876' χ2 p-value for Mo17 x B73: '.0002235' Biased in favor of strain: 'B73'
GRMZM2G078839	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1576	818	1326	680	65.83%	33.90%	2394	2006	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G078839	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.958299 x 10^-1	426	198	335	479	68.27%	58.85%	624	814	RefGen V2	χ2 p-value for B73 x Mo17: '.3958299' χ2 p-value for Mo17 x B73: '2.20e-06' Biased in favor of strain: ''
GRMZM2G078832	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.11 x 10^-10	916	299	509	632	75.39%	55.39%	1215	1141	RefGen V2	χ2 p-value for B73 x Mo17: '1.11e-10' χ2 p-value for Mo17 x B73: '6.46e-16' Biased in favor of strain: 'B73'
GRMZM2G078832	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.98 x 10^-7	1342	914	921	720	59.49%	43.88%	2256	1641	RefGen V2	χ2 p-value for B73 x Mo17: '2.04e-19' χ2 p-value for Mo17 x B73: '6.98e-07' Biased in favor of strain: 'B73'
GRMZM2G078826	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.71097 x 10^-2	58	25	61	44	69.88%	41.90%	83	105	RefGen V2	χ2 p-value for B73 x Mo17: '.0002921' χ2 p-value for Mo17 x B73: '.0971097' Biased in favor of strain: ''
GRMZM2G078826	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.124365 x 10^-1	36	13	45	24	73.47%	34.78%	49	69	RefGen V2	χ2 p-value for B73 x Mo17: '.3124365' χ2 p-value for Mo17 x B73: '1.93e-08' Biased in favor of strain: ''
GRMZM2G078820	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.997788 x 10^-1	57	32	43	96	64.04%	69.06%	89	139	RefGen V2	χ2 p-value for B73 x Mo17: '.5997788' χ2 p-value for Mo17 x B73: '.5486665' Biased in favor of strain: ''
GRMZM2G078820	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.55807 x 10^-2	23	13	32	19	63.89%	37.25%	36	51	RefGen V2	χ2 p-value for B73 x Mo17: '.0955807' χ2 p-value for Mo17 x B73: '.0687036' Biased in favor of strain: ''
GRMZM2G078806	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.81025 x 10^-2	38	20	26	9	65.52%	25.71%	58	35	RefGen V2	χ2 p-value for B73 x Mo17: '.0181025' χ2 p-value for Mo17 x B73: '.0040592' Biased in favor of strain: 'B73'
GRMZM2G078806	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		11	0	4	3	100.00%	42.86%	11	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0190169' χ2 p-value for Mo17 x B73: '.1814491' Biased in favor of strain: ''
GRMZM2G078798	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.255219 x 10^-1	1822	924	453	564	66.35%	55.46%	2746	1017	RefGen V2	χ2 p-value for B73 x Mo17: '.7255219' χ2 p-value for Mo17 x B73: '3.37e-14' Biased in favor of strain: ''
GRMZM2G078798	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.419382 x 10^-1	70	26	39	35	72.92%	47.30%	96	74	RefGen V2	χ2 p-value for B73 x Mo17: '7.10e-06' χ2 p-value for Mo17 x B73: '.6419382' Biased in favor of strain: ''
GRMZM2G078781	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.43 x 10^-16	145	35	359	109	80.56%	23.29%	180	468	RefGen V2	χ2 p-value for B73 x Mo17: '2.43e-16' χ2 p-value for Mo17 x B73: '6.86e-31' Biased in favor of strain: 'B73'
GRMZM2G078781	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.86 x 10^-6	82	5	34	20	94.25%	37.04%	87	54	RefGen V2	χ2 p-value for B73 x Mo17: '4.81e-08' χ2 p-value for Mo17 x B73: '3.86e-06' Biased in favor of strain: 'B73'
GRMZM2G078779	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		15	0	7	2	100.00%	22.22%	15	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0061701' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G078779	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	3	0	100.00%	0.00%	3	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G078756	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.333269 x 10^-1	44	31	36	19	58.67%	34.55%	75	55	RefGen V2	χ2 p-value for B73 x Mo17: '.1333269' χ2 p-value for Mo17 x B73: '.0218895' Biased in favor of strain: ''
GRMZM2G078756	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.997788 x 10^-1	57	32	33	47	64.04%	58.75%	89	80	RefGen V2	χ2 p-value for B73 x Mo17: '.5997788' χ2 p-value for Mo17 x B73: '.1330758' Biased in favor of strain: ''
GRMZM2G078754	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.650214 x 10^-1	17	7	4	13	70.83%	76.47%	24	17	RefGen V2	χ2 p-value for B73 x Mo17: '.6650214' χ2 p-value for Mo17 x B73: '.3911726' Biased in favor of strain: ''
GRMZM2G078754	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.059032 x 10^-1	34	17	24	16	66.67%	40.00%	51	40	RefGen V2	χ2 p-value for B73 x Mo17: '.0172903' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: ''
GRMZM2G078723	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.556 x 10^-4	38	91	35	73	29.46%	67.59%	129	108	RefGen V2	χ2 p-value for B73 x Mo17: '3.07e-06' χ2 p-value for Mo17 x B73: '.0002556' Biased in favor of strain: 'Mo17'
GRMZM2G078723	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999997 x 10^-1	17	9	13	26	65.38%	66.67%	26	39	RefGen V2	χ2 p-value for B73 x Mo17: '.8896875' χ2 p-value for Mo17 x B73: '.9999997' Biased in favor of strain: ''
GRMZM2G078711	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.129394 x 10^-1	89	49	58	123	64.49%	67.96%	138	181	RefGen V2	χ2 p-value for B73 x Mo17: '.5879605' χ2 p-value for Mo17 x B73: '.7129394' Biased in favor of strain: ''
GRMZM2G078711	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.019946 x 10^-1	108	67	58	77	61.71%	57.04%	175	135	RefGen V2	χ2 p-value for B73 x Mo17: '.0019397' χ2 p-value for Mo17 x B73: '.1019946' Biased in favor of strain: ''
GRMZM2G078691	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.39 x 10^-12	695	462	746	436	60.07%	36.89%	1157	1182	RefGen V2	χ2 p-value for B73 x Mo17: '7.39e-12' χ2 p-value for Mo17 x B73: '1.94e-19' Biased in favor of strain: 'B73'
GRMZM2G078691	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.050419 x 10^-1	24	23	24	31	51.06%	56.36%	47	55	RefGen V2	χ2 p-value for B73 x Mo17: '.0232582' χ2 p-value for Mo17 x B73: '.1050419' Biased in favor of strain: ''

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