Displaying data sets 24401 - 24500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G24920 GDU5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24920 GDU5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.75854 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24910 CYP714A1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '139.682'
Avg. expression score in LCM sample: '4.9385'
Tissue used: 'pure endosperm, no chalazal'
AT5G24910 CYP714A1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '520.638'
Avg. expression score in LCM sample: '4.9385'
Tissue used: 'full endosperm'
AT5G24910 CYP714A1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '13.805'
Avg. embryo expression (LCM): '0'
AT5G24910 CYP714A1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24910 CYP714A1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24910 CYP714A1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24900 CYP714A2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 0 2 0.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '992.39'
Avg. expression score in LCM sample: '917.517'
Tissue used: 'pure endosperm, no chalazal'
AT5G24900 CYP714A2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '635.55'
Avg. expression score in LCM sample: '917.517'
Tissue used: 'full endosperm'
AT5G24900 CYP714A2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '209.212'
Avg. embryo expression (LCM): '76.5069'
AT5G24900 CYP714A2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24900 CYP714A2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24900 CYP714A2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '61.8233'
Avg. expression score in LCM sample: '19.6658'
Tissue used: 'pure endosperm, no chalazal'
AT5G24890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 4 100.00% 0 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '117.217'
Avg. expression score in LCM sample: '19.6658'
Tissue used: 'full endosperm'
AT5G24890 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '60.5567'
Avg. embryo expression (LCM): '70.5792'
AT5G24890 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24890 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24890 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.33333 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.85714 x 10-1 0 0 3 1 25.00% 0 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.080495'
Avg. expression score for this sample: '3.5199'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G24880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.02564 x 10-1 1 4 2 0 20.00% 0.00% 5 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.080495'
Avg. expression score for this sample: '1.99754'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G24880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.559306'
Avg. embryo expression (LCM): '0'
AT5G24880 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24880 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24879 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G24879 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G24879 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G24879 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24879 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24879 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.87148 x 10-1 26 14 17 57 65.00% 77.03% 40 74 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.3e-13'
Avg. expression score for this sample: '23.4139'
Avg. expression score in LCM sample: '12.7137'
Tissue used: 'pure endosperm, no chalazal'
AT5G24870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.3 x 10-15 104 34 24 312 75.36% 92.86% 138 336 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.3e-13'
Avg. expression score for this sample: '61.9899'
Avg. expression score in LCM sample: '12.7137'
Tissue used: 'full endosperm'
AT5G24870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.60831 x 10-1 21 22 9 13 48.84% 59.09% 43 22 TAIR8 Avg. embryo expression (dissected): '20.2104'
Avg. embryo expression (LCM): '12.0814'
AT5G24870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.24708 x 10-1 76 9 89.41% 85 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.3 x 10-9 176 2 98.88% 178 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.09 x 10-4 211 13 94.20% 224 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24860 FPF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.0806'
Avg. expression score in LCM sample: '4.37998'
Tissue used: 'pure endosperm, no chalazal'
AT5G24860 FPF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '31.5273'
Avg. expression score in LCM sample: '4.37998'
Tissue used: 'full endosperm'
AT5G24860 FPF1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.761'
Avg. embryo expression (LCM): '1.87123'
AT5G24860 FPF1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24860 FPF1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24860 FPF1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24850 CRY3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 168 11 85 27 93.85% 24.11% 179 112 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.64581'
Avg. expression score for this sample: '178.258'
Avg. expression score in LCM sample: '85.1891'
Tissue used: 'pure endosperm, no chalazal'
AT5G24850 CRY3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.30186 x 10-1 109 15 69 32 87.90% 31.68% 124 101 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.64581'
Avg. expression score for this sample: '87.6391'
Avg. expression score in LCM sample: '85.1891'
Tissue used: 'full endosperm'
AT5G24850 CRY3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.2374 x 10-2 42 6 13 0 87.50% 0.00% 48 13 TAIR8 Avg. embryo expression (dissected): '63.6005'
Avg. embryo expression (LCM): '40.9912'
AT5G24850 CRY3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.59925 x 10-1 6 6 50.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24850 CRY3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.72242 x 10-1 35 23 60.34% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24850 CRY3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-8 61 2 96.83% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.75651 x 10-1 35 33 15 31 51.47% 67.39% 68 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.013369'
Avg. expression score for this sample: '30.1404'
Avg. expression score in LCM sample: '18.9015'
Tissue used: 'pure endosperm, no chalazal'
AT5G24840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.6 x 10-5 78 19 35 159 80.41% 81.96% 97 194 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.013369'
Avg. expression score for this sample: '56.6627'
Avg. expression score in LCM sample: '18.9015'
Tissue used: 'full endosperm'
AT5G24840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.75233 x 10-1 67 105 8 23 38.95% 74.19% 172 31 TAIR8 Avg. embryo expression (dissected): '65.6095'
Avg. embryo expression (LCM): '94.227'
AT5G24840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.02848 x 10-1 24 5 82.76% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.2 x 10-5 218 29 88.26% 247 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.16987 x 10-1 93 41 69.40% 134 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.83943 x 10-1 55 15 19 30 78.57% 61.22% 70 49 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.089204'
Avg. expression score for this sample: '29.8791'
Avg. expression score in LCM sample: '24.7954'
Tissue used: 'pure endosperm, no chalazal'
AT5G24830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.38387 x 10-1 108 31 44 94 77.70% 68.12% 139 138 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.089204'
Avg. expression score for this sample: '40.9092'
Avg. expression score in LCM sample: '24.7954'
Tissue used: 'full endosperm'
AT5G24830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 48 35 22 10 57.83% 31.25% 83 32 TAIR8 Avg. embryo expression (dissected): '40.6528'
Avg. embryo expression (LCM): '40.4009'
AT5G24830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 14 5 73.68% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.8 x 10-14 151 186 44.81% 337 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-10 367 40 90.17% 407 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24825 MIR169B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G24825 MIR169B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G24825 MIR169B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G24825 MIR169B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24825 MIR169B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24825 MIR169B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.202126'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G24820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.02126 x 10-1 16 4 0 7 80.00% 100.00% 20 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.202126'
Avg. expression score for this sample: '8.18968'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G24820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '.609195'
Avg. embryo expression (LCM): '0'
AT5G24820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.35739 x 10-1 130 31 83 103 80.75% 55.38% 161 186 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000401'
Avg. expression score for this sample: '122.645'
Avg. expression score in LCM sample: '62.1575'
Tissue used: 'pure endosperm, no chalazal'
AT5G24810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.6 x 10-5 276 73 112 323 79.08% 74.25% 349 435 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000401'
Avg. expression score for this sample: '189.05'
Avg. expression score in LCM sample: '62.1575'
Tissue used: 'full endosperm'
AT5G24810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.94715 x 10-1 59 28 21 11 67.82% 34.38% 87 32 TAIR8 Avg. embryo expression (dissected): '79.2426'
Avg. embryo expression (LCM): '41.0163'
AT5G24810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.39262 x 10-1 52 11 82.54% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.21 x 10-4 256 49 83.93% 305 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.9 x 10-23 546 45 92.39% 591 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24800 BZIP9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.681659'
Avg. expression score for this sample: '25.7207'
Avg. expression score in LCM sample: '1.45509'
Tissue used: 'pure endosperm, no chalazal'
AT5G24800 BZIP9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 9 3 0 1 75.00% 100.00% 12 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.681659'
Avg. expression score for this sample: '67.1278'
Avg. expression score in LCM sample: '1.45509'
Tissue used: 'full endosperm'
AT5G24800 BZIP9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '36.121'
Avg. embryo expression (LCM): '0'
AT5G24800 BZIP9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24800 BZIP9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24800 BZIP9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.9345 x 10-2 47 2 95.92% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.8404 x 10-2 17 0 0 0 100.00% 17 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.0e-06'
Avg. expression score for this sample: '63.1491'
Avg. expression score in LCM sample: '10.0975'
Tissue used: 'pure endosperm, no chalazal'
AT5G24790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.6 x 10-4 32 0 0 1 100.00% 100.00% 32 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.0e-06'
Avg. expression score for this sample: '72.9586'
Avg. expression score in LCM sample: '10.0975'
Tissue used: 'full endosperm'
AT5G24790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.66045'
Avg. embryo expression (LCM): '0'
AT5G24790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.5314 x 10-1 109 3 97.32% 112 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24780 VSP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G24780 VSP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 2.30769 x 10-1 7 0 0 0 100.00% 7 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '1.8325'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G24780 VSP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G24780 VSP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24780 VSP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24780 VSP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G24770 VSP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.184493'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G24770 VSP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 1 0 0 85.71% 7 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.05018'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'