Displaying data sets 24201 - 24300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G25240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.2171 x 10-2 363 162 82 252 69.14% 75.45% 525 334 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.218674'
Avg. expression score for this sample: '301.444'
Avg. expression score in LCM sample: '359.996'
Tissue used: 'full endosperm'
AT5G25240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.5507 x 10-2 24 13 4 12 64.86% 75.00% 37 16 TAIR8 Avg. embryo expression (dissected): '42.8924'
Avg. embryo expression (LCM): '12.7344'
AT5G25240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.8323 x 10-1 54 16 77.14% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.0991 x 10-2 56 12 82.35% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3 x 10-5 51 0 100.00% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 12 6 2 3 66.67% 60.00% 18 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.299472'
Avg. expression score for this sample: '36.9102'
Avg. expression score in LCM sample: '45.4313'
Tissue used: 'pure endosperm, no chalazal'
AT5G25230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.84368 x 10-1 36 6 6 7 85.71% 53.85% 42 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.299472'
Avg. expression score for this sample: '43.4413'
Avg. expression score in LCM sample: '45.4313'
Tissue used: 'full endosperm'
AT5G25230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28571 x 10-1 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Avg. embryo expression (dissected): '46.9764'
Avg. embryo expression (LCM): '34.0714'
AT5G25230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1 x 10-9 14 48 22.58% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25220 KNAT3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.7 x 10-5 396 4 99.00% 400 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25220 KNAT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.27922 x 10-1 20 7 0 14 74.07% 100.00% 27 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-22'
Avg. expression score for this sample: '100.329'
Avg. expression score in LCM sample: '4.65924'
Tissue used: 'pure endosperm, no chalazal'
AT5G25220 KNAT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.6 x 10-23 150 13 4 182 92.02% 97.85% 163 186 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-22'
Avg. expression score for this sample: '285.892'
Avg. expression score in LCM sample: '4.65924'
Tissue used: 'full endosperm'
AT5G25220 KNAT3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.14275 x 10-1 42 27 6 9 60.87% 60.00% 69 15 TAIR8 Avg. embryo expression (dissected): '364.682'
Avg. embryo expression (LCM): '358.246'
AT5G25220 KNAT3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.95474 x 10-1 39 1 97.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25220 KNAT3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 222 14 94.07% 236 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.5677'
Avg. expression score in LCM sample: '6.3348'
Tissue used: 'pure endosperm, no chalazal'
AT5G25210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '16.1416'
Avg. expression score in LCM sample: '6.3348'
Tissue used: 'full endosperm'
AT5G25210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.02916'
Avg. embryo expression (LCM): '5.41275'
AT5G25210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.23247'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G25200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.315554'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G25200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.34984'
Avg. embryo expression (LCM): '0'
AT5G25200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25190 ESE3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25190 ESE3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.42596'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G25190 ESE3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.3899'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G25190 ESE3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '44.0815'
Avg. embryo expression (LCM): '30.8815'
AT5G25190 ESE3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25190 ESE3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25180 CYP71B14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.166776'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G25180 CYP71B14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.891309'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G25180 CYP71B14 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.715'
Avg. embryo expression (LCM): '.803749'
AT5G25180 CYP71B14 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25180 CYP71B14 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25180 CYP71B14 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.932'
Avg. expression score in LCM sample: '8.21614'
Tissue used: 'pure endosperm, no chalazal'
AT5G25170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '16.4622'
Avg. expression score in LCM sample: '8.21614'
Tissue used: 'full endosperm'
AT5G25170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '68.5377'
Avg. embryo expression (LCM): '52.6581'
AT5G25170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25160 ZFP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G25160 ZFP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.174456'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G25160 ZFP3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G25160 ZFP3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25160 ZFP3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25160 ZFP3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25150 TAF5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.82043 x 10-1 7 1 0 2 87.50% 100.00% 8 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '67.0834'
Avg. expression score in LCM sample: '104.59'
Tissue used: 'pure endosperm, no chalazal'
AT5G25150 TAF5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.28424 x 10-1 5 4 5 3 55.56% 37.50% 9 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '63.5685'
Avg. expression score in LCM sample: '104.59'
Tissue used: 'full endosperm'
AT5G25150 TAF5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 3 0 1 50.00% 100.00% 6 1 TAIR8 Avg. embryo expression (dissected): '67.5932'
Avg. embryo expression (LCM): '114.911'
AT5G25150 TAF5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.8224 x 10-2 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25150 TAF5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.57517 x 10-1 17 5 77.27% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25150 TAF5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1525 x 10-2 22 2 91.67% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25140 CYP71B13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G25140 CYP71B13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.322318'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G25140 CYP71B13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G25140 CYP71B13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25140 CYP71B13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25140 CYP71B13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25130 CYP71B12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.4472 x 10-1 3 2 0 8 60.00% 100.00% 5 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.305293'
Avg. expression score for this sample: '4.70572'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G25130 CYP71B12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.54521 x 10-1 30 28 9 65 51.72% 87.84% 58 74 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.305293'
Avg. expression score for this sample: '34.6881'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G25130 CYP71B12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.37524 x 10-1 3 16 1 4 15.79% 80.00% 19 5 TAIR8 Avg. embryo expression (dissected): '9.4387'
Avg. embryo expression (LCM): '0'
AT5G25130 CYP71B12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.09 x 10-3 26 1 96.30% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25130 CYP71B12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.91483 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25130 CYP71B12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.73175 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25120 CYP71B11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G25120 CYP71B11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.400756'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G25120 CYP71B11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.762855'
Avg. embryo expression (LCM): '.728397'
AT5G25120 CYP71B11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25120 CYP71B11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25120 CYP71B11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25110 CIPK25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.44334 x 10-1 20 3 9 12 86.96% 57.14% 23 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.456233'
Avg. expression score for this sample: '95.7579'
Avg. expression score in LCM sample: '47.6653'
Tissue used: 'pure endosperm, no chalazal'
AT5G25110 CIPK25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.83261 x 10-1 26 14 28 29 65.00% 50.88% 40 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.456233'
Avg. expression score for this sample: '46.5438'
Avg. expression score in LCM sample: '47.6653'
Tissue used: 'full endosperm'
AT5G25110 CIPK25 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '8.84005'
Avg. embryo expression (LCM): '10.3608'
AT5G25110 CIPK25 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25110 CIPK25 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.1004 x 10-2 2 6 25.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25110 CIPK25 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.0 x 10-5 38 3 92.68% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25102 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G25102 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.0834'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G25102 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G25102 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25102 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25102 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.60935 x 10-1 36 20 10 34 64.29% 77.27% 56 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.206363'
Avg. expression score for this sample: '224.486'
Avg. expression score in LCM sample: '230.507'
Tissue used: 'pure endosperm, no chalazal'
AT5G25100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.24857 x 10-1 71 40 24 95 63.96% 79.83% 111 119 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.206363'
Avg. expression score for this sample: '281.234'
Avg. expression score in LCM sample: '230.507'
Tissue used: 'full endosperm'
AT5G25100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.56392 x 10-1 26 20 12 3 56.52% 20.00% 46 15 TAIR8 Avg. embryo expression (dissected): '236.622'
Avg. embryo expression (LCM): '169.365'
AT5G25100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.5438 x 10-2 30 5 85.71% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25100 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.188 x 10-3 115 19 85.82% 134 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.5 x 10-12 196 11 94.69% 207 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25090 ENODL13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.35353 x 10-1 19 11 0 13 63.33% 100.00% 30 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '43.3986'
Avg. expression score in LCM sample: '44.9168'
Tissue used: 'pure endosperm, no chalazal'
AT5G25090 ENODL13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.17323 x 10-1 11 6 13 16 64.71% 55.17% 17 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '43.0279'
Avg. expression score in LCM sample: '44.9168'
Tissue used: 'full endosperm'
AT5G25090 ENODL13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.01696 x 10-1 46 80 8 13 36.51% 61.90% 126 21 TAIR8 Avg. embryo expression (dissected): '253.031'
Avg. embryo expression (LCM): '183.142'
AT5G25090 ENODL13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25090 ENODL13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G25090 ENODL13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.88634 x 10-1 4 3 57.14% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'