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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G64350 FKBP12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1197.3'
Avg. expression score in LCM sample: '323.501'
Tissue used: 'full endosperm'
AT5G64350 FKBP12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1180.87'
Avg. embryo expression (LCM): '1037.54'
AT5G64350 FKBP12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64350 FKBP12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64343 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64343 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G64343 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G64343 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G64343 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64343 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64342 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.887 x 10-3 50 3 94.34% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64342 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.57977 x 10-1 4 0 11 7 100.00% 38.89% 4 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.153537'
Avg. expression score for this sample: '578.369'
Avg. expression score in LCM sample: '169.246'
Tissue used: 'pure endosperm, no chalazal'
AT5G64342 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.2119 x 10-2 37 9 9 43 80.43% 82.69% 46 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.153537'
Avg. expression score for this sample: '956.28'
Avg. expression score in LCM sample: '169.246'
Tissue used: 'full endosperm'
AT5G64342 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.33147 x 10-1 14 19 5 7 42.42% 58.33% 33 12 TAIR8 Avg. embryo expression (dissected): '698.542'
Avg. embryo expression (LCM): '548.006'
AT5G64342 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64342 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.727 x 10-3 52 3 94.55% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64341 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64341 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.55403'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G64341 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.52137'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G64341 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.51905'
Avg. embryo expression (LCM): '0'
AT5G64341 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64341 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64340 SAC51 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64340 SAC51 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G64340 SAC51 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G64340 SAC51 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G64340 SAC51 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64340 SAC51 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64330 NPH3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64330 NPH3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.29201'
Avg. expression score in LCM sample: '.558521'
Tissue used: 'pure endosperm, no chalazal'
AT5G64330 NPH3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.71555'
Avg. expression score in LCM sample: '.558521'
Tissue used: 'full endosperm'
AT5G64330 NPH3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '6.88569'
Avg. embryo expression (LCM): '10.1473'
AT5G64330 NPH3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64330 NPH3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 12 3 80.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.81659 x 10-1 8 1 2 4 88.89% 66.67% 9 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.284773'
Avg. expression score for this sample: '25.6214'
Avg. expression score in LCM sample: '26.6326'
Tissue used: 'pure endosperm, no chalazal'
AT5G64320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.84078 x 10-1 8 4 0 9 66.67% 100.00% 12 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.284773'
Avg. expression score for this sample: '39.3912'
Avg. expression score in LCM sample: '26.6326'
Tissue used: 'full endosperm'
AT5G64320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.51186 x 10-1 8 7 1 4 53.33% 80.00% 15 5 TAIR8 Avg. embryo expression (dissected): '56.2027'
Avg. embryo expression (LCM): '60.8589'
AT5G64320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.39921 x 10-1 14 7 66.67% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64310 AGP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.7 x 10-5 223 37 85.77% 260 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64310 AGP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.08342 x 10-1 115 24 58 64 82.73% 52.46% 139 122 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.6e-08'
Avg. expression score for this sample: '583.563'
Avg. expression score in LCM sample: '173.156'
Tissue used: 'pure endosperm, no chalazal'
AT5G64310 AGP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.2 x 10-9 584 147 222 590 79.89% 72.66% 731 812 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.6e-08'
Avg. expression score for this sample: '783.605'
Avg. expression score in LCM sample: '173.156'
Tissue used: 'full endosperm'
AT5G64310 AGP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.8246 x 10-2 79 32 19 7 71.17% 26.92% 111 26 TAIR8 Avg. embryo expression (dissected): '804.189'
Avg. embryo expression (LCM): '213.132'
AT5G64310 AGP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.43105 x 10-1 37 14 72.55% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64310 AGP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3373 x 10-2 79 42 65.29% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64300 GCH endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64300 GCH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '355.785'
Avg. expression score in LCM sample: '131.796'
Tissue used: 'pure endosperm, no chalazal'
AT5G64300 GCH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '494.24'
Avg. expression score in LCM sample: '131.796'
Tissue used: 'full endosperm'
AT5G64300 GCH embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '567.848'
Avg. embryo expression (LCM): '271.127'
AT5G64300 GCH endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64300 GCH endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64290 DIT2.1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2 x 10-20 411 49 89.35% 460 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64290 DIT2.1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 359 133 204 314 72.97% 60.62% 492 518 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.058198'
Avg. expression score for this sample: '191.393'
Avg. expression score in LCM sample: '134.442'
Tissue used: 'pure endosperm, no chalazal'
AT5G64290 DIT2.1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.555 x 10-3 399 80 152 231 83.30% 60.31% 479 383 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.058198'
Avg. expression score for this sample: '134.982'
Avg. expression score in LCM sample: '134.442'
Tissue used: 'full endosperm'
AT5G64290 DIT2.1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.11135 x 10-1 533 479 240 193 52.67% 44.57% 1012 433 TAIR8 Avg. embryo expression (dissected): '475.554'
Avg. embryo expression (LCM): '300.79'
AT5G64290 DIT2.1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.6933 x 10-2 53 38 58.24% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64290 DIT2.1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.73068 x 10-1 273 100 73.19% 373 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64280 DiT2.2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.004 23 1 95.83% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64280 DiT2.2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.8917 x 10-1 9 5 7 9 64.29% 56.25% 14 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '87.4034'
Avg. expression score in LCM sample: '61.9517'
Tissue used: 'pure endosperm, no chalazal'
AT5G64280 DiT2.2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 3 4 6 76.92% 60.00% 13 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '111.689'
Avg. expression score in LCM sample: '61.9517'
Tissue used: 'full endosperm'
AT5G64280 DiT2.2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.31799 x 10-1 19 7 5 4 73.08% 44.44% 26 9 TAIR8 Avg. embryo expression (dissected): '111.8'
Avg. embryo expression (LCM): '76.532'
AT5G64280 DiT2.2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.39394 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64280 DiT2.2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.36647 x 10-1 9 3 75.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.22 x 10-3 140 30 82.35% 170 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.13876 x 10-1 29 15 17 20 65.91% 54.05% 44 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.842796'
Avg. expression score for this sample: '315.415'
Avg. expression score in LCM sample: '188.692'
Tissue used: 'pure endosperm, no chalazal'
AT5G64270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.80837 x 10-1 48 18 24 60 72.73% 71.43% 66 84 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.842796'
Avg. expression score for this sample: '378.446'
Avg. expression score in LCM sample: '188.692'
Tissue used: 'full endosperm'
AT5G64270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.95298 x 10-1 33 23 7 6 58.93% 46.15% 56 13 TAIR8 Avg. embryo expression (dissected): '376.135'
Avg. embryo expression (LCM): '248.509'
AT5G64270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.59952 x 10-1 10 3 76.92% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 108 52 67.50% 160 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64260 EXL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.93384 x 10-1 80 7 91.95% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64260 EXL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.84078 x 10-1 6 3 1 11 66.67% 91.67% 9 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.8e-16'
Avg. expression score for this sample: '145.911'
Avg. expression score in LCM sample: '3.17475'
Tissue used: 'pure endosperm, no chalazal'
AT5G64260 EXL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.5 x 10-16 76 27 12 279 73.79% 95.88% 103 291 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.8e-16'
Avg. expression score for this sample: '347.022'
Avg. expression score in LCM sample: '3.17475'
Tissue used: 'full endosperm'
AT5G64260 EXL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.01621 x 10-1 15 25 3 3 37.50% 50.00% 40 6 TAIR8 Avg. embryo expression (dissected): '405.718'
Avg. embryo expression (LCM): '30.7811'
AT5G64260 EXL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.6113 x 10-1 34 2 94.44% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64260 EXL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4363 x 10-2 109 4 96.46% 113 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 917 26 97.24% 943 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.16 x 10-4 207 47 62 158 81.50% 71.82% 254 220 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000116'
Avg. expression score for this sample: '471.246'
Avg. expression score in LCM sample: '278.672'
Tissue used: 'pure endosperm, no chalazal'
AT5G64250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.9569 x 10-2 165 76 66 208 68.46% 75.91% 241 274 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000116'
Avg. expression score for this sample: '359.825'
Avg. expression score in LCM sample: '278.672'
Tissue used: 'full endosperm'
AT5G64250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.29428 x 10-1 83 100 32 33 45.36% 50.77% 183 65 TAIR8 Avg. embryo expression (dissected): '341.22'
Avg. embryo expression (LCM): '160.888'
AT5G64250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.1193 x 10-2 46 6 88.46% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.2 x 10-8 217 23 90.42% 240 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64240 MC3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64240 MC3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.476191'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G64240 MC3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.754371'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G64240 MC3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.637167'
Avg. embryo expression (LCM): '1.5447'
AT5G64240 MC3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64240 MC3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.84214 x 10-1 21 4 84.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 2 5 6 80.00% 54.55% 10 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.70122'
Avg. expression score for this sample: '1046.76'
Avg. expression score in LCM sample: '263.328'
Tissue used: 'pure endosperm, no chalazal'
AT5G64230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.35353 x 10-1 22 10 1 10 68.75% 90.91% 32 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.70122'
Avg. expression score for this sample: '1392.46'
Avg. expression score in LCM sample: '263.328'
Tissue used: 'full endosperm'
AT5G64230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '76.2492'
Avg. embryo expression (LCM): '27.7921'
AT5G64230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 9 4 69.23% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.16242 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.40653 x 10-1 66 25 72.53% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.19252 x 10-1 14 9 4 17 60.87% 80.95% 23 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.050564'
Avg. expression score for this sample: '27.382'
Avg. expression score in LCM sample: '23.502'
Tissue used: 'pure endosperm, no chalazal'
AT5G64220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.3249 x 10-2 35 10 5 35 77.78% 87.50% 45 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.050564'
Avg. expression score for this sample: '50.6611'
Avg. expression score in LCM sample: '23.502'
Tissue used: 'full endosperm'
AT5G64220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.83247 x 10-1 18 24 9 8 42.86% 47.06% 42 17 TAIR8 Avg. embryo expression (dissected): '56.8869'
Avg. embryo expression (LCM): '29.3996'
AT5G64220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.06778 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.50901 x 10-1 91 22 80.53% 113 TAIR8 Mutant effect: 'N/A (not a MEG)'