GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G085483	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.291294 x 10^-1	177	75	158	189	70.24%	54.47%	252	347	RefGen V2	χ2 p-value for B73 x Mo17: '.2291294' χ2 p-value for Mo17 x B73: '1.43e-06' Biased in favor of strain: ''
GRMZM2G085483	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.3797 x 10^-3	190	137	225	155	58.10%	40.79%	327	380	RefGen V2	χ2 p-value for B73 x Mo17: '.0033797' χ2 p-value for Mo17 x B73: '.0003295' Biased in favor of strain: 'B73'
GRMZM2G085474	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.5428 x 10^-3	77	43	72	41	64.17%	36.28%	120	113	RefGen V2	χ2 p-value for B73 x Mo17: '.0019108' χ2 p-value for Mo17 x B73: '.0035428' Biased in favor of strain: 'B73'
GRMZM2G085474	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	0	100.00%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G085460	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	2		66.67%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G085460	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.49958 x 10^-2	76	105	71	48	41.99%	40.34%	181	119	RefGen V2	χ2 p-value for B73 x Mo17: '.0311186' χ2 p-value for Mo17 x B73: '.0349958' Biased in favor of strain: ''
GRMZM2G085427	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.55 x 10^-4	12	37	23	57	24.49%	71.25%	49	80	RefGen V2	χ2 p-value for B73 x Mo17: '.000355' χ2 p-value for Mo17 x B73: '.0001439' Biased in favor of strain: 'Mo17'
GRMZM2G085427	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.23 x 10^-6	5	21	3	57	19.23%	95.00%	26	60	RefGen V2	χ2 p-value for B73 x Mo17: '2.88e-07' χ2 p-value for Mo17 x B73: '3.23e-06' Biased in favor of strain: 'Mo17'
GRMZM2G085420	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0 x 10^-30	4	126	7	299	3.08%	97.71%	130	306	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.04e-30' Biased in favor of strain: 'Mo17'
GRMZM2G085420	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	5	283	4	367	1.74%	98.92%	288	371	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G085411	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	1	0	100.00%	0.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G085411	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	2		100.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G085402	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999996 x 10^-1	21	7	19	38	75.00%	66.67%	28	57	RefGen V2	χ2 p-value for B73 x Mo17: '.3495861' χ2 p-value for Mo17 x B73: '.9999996' Biased in favor of strain: ''
GRMZM2G085402	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.912971 x 10^-1	22	11	11	8	66.67%	42.11%	33	19	RefGen V2	χ2 p-value for B73 x Mo17: '.0555111' χ2 p-value for Mo17 x B73: '.4912971' Biased in favor of strain: ''
GRMZM2G085392	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	0	23	17	100.00%	42.50%	6	40	RefGen V2	χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.3427817' Biased in favor of strain: ''
GRMZM2G085392	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	5	13		72.22%	0	18	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G085378	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.624129 x 10^-1	241	72	104	175	77.00%	62.72%	313	279	RefGen V2	χ2 p-value for B73 x Mo17: '.0001058' χ2 p-value for Mo17 x B73: '.1624129' Biased in favor of strain: ''
GRMZM2G085378	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.62 x 10^-10	482	306	451	265	61.17%	37.01%	788	716	RefGen V2	χ2 p-value for B73 x Mo17: '3.62e-10' χ2 p-value for Mo17 x B73: '3.62e-12' Biased in favor of strain: 'B73'
GRMZM2G085336	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2087	214	1637	237	90.70%	12.65%	2301	1874	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G085336	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1163	60	721	121	95.09%	14.37%	1223	842	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G085320	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.82 x 10^-5	99	18	67	36	84.62%	34.95%	117	103	RefGen V2	χ2 p-value for B73 x Mo17: '.0000382' χ2 p-value for Mo17 x B73: '8.61e-12' Biased in favor of strain: 'B73'
GRMZM2G085320	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.55 x 10^-7	185	86	164	85	68.27%	34.14%	271	249	RefGen V2	χ2 p-value for B73 x Mo17: '1.81e-09' χ2 p-value for Mo17 x B73: '5.55e-07' Biased in favor of strain: 'B73'
GRMZM2G085303	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.625 x 10^-3	47	12	46	23	79.66%	33.33%	59	69	RefGen V2	χ2 p-value for B73 x Mo17: '5.20e-06' χ2 p-value for Mo17 x B73: '.005625' Biased in favor of strain: 'B73'
GRMZM2G085303	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.08192 x 10^-1	29	10	35	10	74.36%	22.22%	39	45	RefGen V2	χ2 p-value for B73 x Mo17: '.308192' χ2 p-value for Mo17 x B73: '2.54e-10' Biased in favor of strain: ''
GRMZM2G085301	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.686608 x 10^-1	584	301	456	474	65.99%	50.97%	885	930	RefGen V2	χ2 p-value for B73 x Mo17: '.6686608' χ2 p-value for Mo17 x B73: '3.12e-24' Biased in favor of strain: ''
GRMZM2G085301	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	810	385	786	334	67.78%	29.82%	1195	1120	RefGen V2	χ2 p-value for B73 x Mo17: '9.72e-35' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G085295	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.87 x 10^-28	413	94	369	125	81.46%	25.30%	507	494	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '4.87e-28' Biased in favor of strain: 'B73'
GRMZM2G085295	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.52 x 10^-8	241	52	305	192	82.25%	38.63%	293	497	RefGen V2	χ2 p-value for B73 x Mo17: '1.52e-08' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G085266	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.12579 x 10^-2	176	141	149	241	55.52%	61.79%	317	390	RefGen V2	χ2 p-value for B73 x Mo17: '.0000255' χ2 p-value for Mo17 x B73: '.0412579' Biased in favor of strain: ''
GRMZM2G085266	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.350871 x 10^-1	198	244	217	227	44.80%	51.13%	442	444	RefGen V2	χ2 p-value for B73 x Mo17: '.0286698' χ2 p-value for Mo17 x B73: '.6350871' Biased in favor of strain: ''
GRMZM2G085249	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.646116 x 10^-1	271	261	284	268	50.94%	48.55%	532	552	RefGen V2	χ2 p-value for B73 x Mo17: '.6646116' χ2 p-value for Mo17 x B73: '.4958682' Biased in favor of strain: ''
GRMZM2G085249	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.467021 x 10^-1	119	68	76	162	63.64%	68.07%	187	238	RefGen V2	χ2 p-value for B73 x Mo17: '.379338' χ2 p-value for Mo17 x B73: '.6467021' Biased in favor of strain: ''
GRMZM2G085246	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.94 x 10^-8	814	186	259	328	81.40%	55.88%	1000	587	RefGen V2	χ2 p-value for B73 x Mo17: '4.92e-23' χ2 p-value for Mo17 x B73: '2.94e-08' Biased in favor of strain: 'B73'
GRMZM2G085246	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.894628 x 10^-1	314	204	228	243	60.62%	51.59%	518	471	RefGen V2	χ2 p-value for B73 x Mo17: '1.34e-06' χ2 p-value for Mo17 x B73: '.4894628' Biased in favor of strain: ''
GRMZM2G085236	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.19 x 10^-10	561	365	622	355	60.58%	36.34%	926	977	RefGen V2	χ2 p-value for B73 x Mo17: '1.19e-10' χ2 p-value for Mo17 x B73: '1.32e-17' Biased in favor of strain: 'B73'
GRMZM2G085236	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.895687 x 10^-1	288	152	185	164	65.45%	46.99%	440	349	RefGen V2	χ2 p-value for B73 x Mo17: '.5895687' χ2 p-value for Mo17 x B73: '6.33e-15' Biased in favor of strain: ''
GRMZM2G085218	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.15569 x 10^-2	15	1	11	0	93.75%	0.00%	16	11	RefGen V2	χ2 p-value for B73 x Mo17: '.0215569' χ2 p-value for Mo17 x B73: '2.73e-06' Biased in favor of strain: ''
GRMZM2G085218	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	1		50.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G085199	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	2	6	0.00%	75.00%	2	8	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G085199	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G085198	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	0	4	3	100.00%	42.86%	6	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.1814491' Biased in favor of strain: ''
GRMZM2G085198	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.9177 x 10^-3	59	106	56	94	35.76%	62.67%	165	150	RefGen V2	χ2 p-value for B73 x Mo17: '.0002533' χ2 p-value for Mo17 x B73: '.0019177' Biased in favor of strain: 'Mo17'
GRMZM2G085189	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.9422 x 10^-2	206	168	207	120	55.08%	36.70%	374	327	RefGen V2	χ2 p-value for B73 x Mo17: '.049422' χ2 p-value for Mo17 x B73: '1.50e-06' Biased in favor of strain: 'B73'
GRMZM2G085189	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.928089 x 10^-1	76	40	37	53	65.52%	58.89%	116	90	RefGen V2	χ2 p-value for B73 x Mo17: '.7928089' χ2 p-value for Mo17 x B73: '.1175247' Biased in favor of strain: ''
GRMZM2G085176	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.864221 x 10^-1	0	10	2	9	0.00%	81.82%	10	11	RefGen V2	χ2 p-value for B73 x Mo17: '7.74e-06' χ2 p-value for Mo17 x B73: '.2864221' Biased in favor of strain: ''
GRMZM2G085176	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	7	0	13	12.50%	100.00%	8	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0338949' χ2 p-value for Mo17 x B73: '.0003115' Biased in favor of strain: ''
GRMZM2G085117	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5918 x 10^-3	224	296	287	426	43.08%	59.75%	520	713	RefGen V2	χ2 p-value for B73 x Mo17: '.0015918' χ2 p-value for Mo17 x B73: '1.93e-07' Biased in favor of strain: 'Mo17'
GRMZM2G085117	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.697 x 10^-4	248	203	132	372	54.99%	73.81%	451	504	RefGen V2	χ2 p-value for B73 x Mo17: '1.43e-07' χ2 p-value for Mo17 x B73: '.0006697' Biased in favor of strain: 'Mo17'
GRMZM2G085113	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G085113	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	1	2	100.00%	66.67%	1	3	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G085111	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.859583 x 10^-1	176	169	172	167	51.01%	49.26%	345	339	RefGen V2	χ2 p-value for B73 x Mo17: '.7062722' χ2 p-value for Mo17 x B73: '.7859583' Biased in favor of strain: ''
GRMZM2G085111	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.099875 x 10^-1	238	141	180	601	62.80%	76.95%	379	781	RefGen V2	χ2 p-value for B73 x Mo17: '.1099875' χ2 p-value for Mo17 x B73: '1.08e-09' Biased in favor of strain: ''
GRMZM2G085089	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999681 x 10^-1	32	16	17	53	66.67%	75.71%	48	70	RefGen V2	χ2 p-value for B73 x Mo17: '.9999681' χ2 p-value for Mo17 x B73: '.1083195' Biased in favor of strain: ''
GRMZM2G085089	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.95551 x 10^-2	52	32	87	66	61.90%	43.14%	84	153	RefGen V2	χ2 p-value for B73 x Mo17: '.0290963' χ2 p-value for Mo17 x B73: '.0895551' Biased in favor of strain: ''
GRMZM2G085086	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.124958 x 10^-1	446	431	307	372	50.86%	54.79%	877	679	RefGen V2	χ2 p-value for B73 x Mo17: '.6124958' χ2 p-value for Mo17 x B73: '.0126145' Biased in favor of strain: ''
GRMZM2G085086	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.119234 x 10^-1	25	8	10	23	75.76%	69.70%	33	33	RefGen V2	χ2 p-value for B73 x Mo17: '.2679482' χ2 p-value for Mo17 x B73: '.7119234' Biased in favor of strain: ''
GRMZM2G085078	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.65003 x 10^-2	40	4	14	12	90.91%	46.15%	44	26	RefGen V2	χ2 p-value for B73 x Mo17: '.0006468' χ2 p-value for Mo17 x B73: '.0265003' Biased in favor of strain: ''
GRMZM2G085078	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.77 x 10^-10	133	49	102	21	73.08%	17.07%	182	123	RefGen V2	χ2 p-value for B73 x Mo17: '4.77e-10' χ2 p-value for Mo17 x B73: '2.80e-13' Biased in favor of strain: 'B73'
GRMZM2G085049	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	936	370	961	379	71.67%	28.28%	1306	1340	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G085049	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.03 x 10^-13	134	5	112	24	96.40%	17.65%	139	136	RefGen V2	χ2 p-value for B73 x Mo17: '1.03e-13' χ2 p-value for Mo17 x B73: '7.62e-34' Biased in favor of strain: 'B73'
GRMZM2G085042	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.36 x 10^-6	512	167	248	315	75.41%	55.95%	679	563	RefGen V2	χ2 p-value for B73 x Mo17: '1.36e-06' χ2 p-value for Mo17 x B73: '6.89e-08' Biased in favor of strain: 'B73'
GRMZM2G085042	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.9673 x 10^-3	427	292	309	243	59.39%	44.02%	719	552	RefGen V2	χ2 p-value for B73 x Mo17: '4.79e-07' χ2 p-value for Mo17 x B73: '.0049673' Biased in favor of strain: 'B73'
GRMZM2G085038	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.93 x 10^-17	70	0	92	0	100.00%	0.00%	70	92	RefGen V2	χ2 p-value for B73 x Mo17: '5.93e-17' χ2 p-value for Mo17 x B73: '8.67e-22' Biased in favor of strain: 'B73'
GRMZM2G085038	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	63	0		0.00%	0	63	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G085035	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	1		50.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G085035	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.29 x 10^-11	402	217	426	250	64.94%	36.98%	619	676	RefGen V2	χ2 p-value for B73 x Mo17: '1.04e-13' χ2 p-value for Mo17 x B73: '1.29e-11' Biased in favor of strain: 'B73'
GRMZM2G085019	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	48	26	28	28	64.86%	50.00%	74	56	RefGen V2	χ2 p-value for B73 x Mo17: '.0105443' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G085019	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.18917 x 10^-1	97	60	65	128	61.78%	66.32%	157	193	RefGen V2	χ2 p-value for B73 x Mo17: '.1942775' χ2 p-value for Mo17 x B73: '.918917' Biased in favor of strain: ''
GRMZM2G085005	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1405	282	770	626	83.28%	44.84%	1687	1396	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G085005	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.53 x 10^-12	1015	642	728	482	61.26%	39.83%	1657	1210	RefGen V2	χ2 p-value for B73 x Mo17: '5.04e-20' χ2 p-value for Mo17 x B73: '1.53e-12' Biased in favor of strain: 'B73'
GRMZM2G084984	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.558849 x 10^-1	120	99	105	78	54.79%	42.62%	219	183	RefGen V2	χ2 p-value for B73 x Mo17: '.1558849' χ2 p-value for Mo17 x B73: '.0459451' Biased in favor of strain: ''
GRMZM2G084984	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.15846 x 10^-1	41	34	18	55	54.67%	75.34%	75	73	RefGen V2	χ2 p-value for B73 x Mo17: '.0274829' χ2 p-value for Mo17 x B73: '.115846' Biased in favor of strain: ''
GRMZM2G084979	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G084979	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		23	2	3	6	92.00%	66.67%	25	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0000267' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G084968	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.68 x 10^-7	51	7	39	6	87.93%	13.33%	58	45	RefGen V2	χ2 p-value for B73 x Mo17: '7.58e-09' χ2 p-value for Mo17 x B73: '8.68e-07' Biased in favor of strain: 'B73'
GRMZM2G084968	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.4984 x 10^-3	29	2	13	5	93.55%	27.78%	31	18	RefGen V2	χ2 p-value for B73 x Mo17: '.0014984' χ2 p-value for Mo17 x B73: '.0004653' Biased in favor of strain: 'B73'
GRMZM2G084958	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G084958	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.657123 x 10^-1	4	7	3	9	36.36%	75.00%	11	12	RefGen V2	χ2 p-value for B73 x Mo17: '.3657123' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G084944	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.322747 x 10^-1	111	133	117	136	45.49%	53.75%	244	253	RefGen V2	χ2 p-value for B73 x Mo17: '.159011' χ2 p-value for Mo17 x B73: '.2322747' Biased in favor of strain: ''
GRMZM2G084944	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.110028 x 10^-1	27	13	18	21	67.50%	53.85%	40	39	RefGen V2	χ2 p-value for B73 x Mo17: '.9110028' χ2 p-value for Mo17 x B73: '.0894293' Biased in favor of strain: ''
GRMZM2G084942	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.64575 x 10^-2	232	166	98	244	58.29%	71.35%	398	342	RefGen V2	χ2 p-value for B73 x Mo17: '.0003933' χ2 p-value for Mo17 x B73: '.0664575' Biased in favor of strain: ''
GRMZM2G084942	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.581411 x 10^-1	188	180	181	182	51.09%	50.14%	368	363	RefGen V2	χ2 p-value for B73 x Mo17: '.6766573' χ2 p-value for Mo17 x B73: '.9581411' Biased in favor of strain: ''
GRMZM2G084940	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.0 x 10^-16	182	33	158	43	84.65%	21.39%	215	201	RefGen V2	χ2 p-value for B73 x Mo17: '2.94e-24' χ2 p-value for Mo17 x B73: '5.00e-16' Biased in favor of strain: 'B73'
GRMZM2G084940	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.45 x 10^-20	260	20	169	51	92.86%	23.18%	280	220	RefGen V2	χ2 p-value for B73 x Mo17: '1.45e-20' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G084938	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.99 x 10^-8	94	1	43	22	98.95%	33.85%	95	65	RefGen V2	χ2 p-value for B73 x Mo17: '2.48e-11' χ2 p-value for Mo17 x B73: '1.99e-08' Biased in favor of strain: 'B73'
GRMZM2G084938	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.78 x 10^-19	153	32	159	31	82.70%	16.32%	185	190	RefGen V2	χ2 p-value for B73 x Mo17: '5.78e-19' χ2 p-value for Mo17 x B73: '1.60e-20' Biased in favor of strain: 'B73'
GRMZM2G084928	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.32 x 10^-5	361	226	288	195	61.50%	40.37%	587	483	RefGen V2	χ2 p-value for B73 x Mo17: '2.52e-08' χ2 p-value for Mo17 x B73: '.0000232' Biased in favor of strain: 'B73'
GRMZM2G084928	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.64 x 10^-7	507	163	272	284	75.67%	51.08%	670	556	RefGen V2	χ2 p-value for B73 x Mo17: '7.64e-07' χ2 p-value for Mo17 x B73: '6.35e-15' Biased in favor of strain: 'B73'
GRMZM2G084899	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.596982 x 10^-1	11	5	3	16	68.75%	84.21%	16	19	RefGen V2	χ2 p-value for B73 x Mo17: '.8596982' χ2 p-value for Mo17 x B73: '.1047575' Biased in favor of strain: ''
GRMZM2G084899	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.164239 x 10^-1	85	82	70	64	50.90%	47.76%	167	134	RefGen V2	χ2 p-value for B73 x Mo17: '.8164239' χ2 p-value for Mo17 x B73: '.6042343' Biased in favor of strain: ''
GRMZM2G084891	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.053805 x 10^-1	9	2	8	5	81.82%	38.46%	11	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0348085' χ2 p-value for Mo17 x B73: '.4053805' Biased in favor of strain: ''
GRMZM2G084891	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.7435 x 10^-1	13	7	10	24	65.00%	70.59%	20	34	RefGen V2	χ2 p-value for B73 x Mo17: '.87435' χ2 p-value for Mo17 x B73: '.627626' Biased in favor of strain: ''
GRMZM2G084881	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.735116 x 10^-1	264	139	163	313	65.51%	65.76%	403	476	RefGen V2	χ2 p-value for B73 x Mo17: '.6218531' χ2 p-value for Mo17 x B73: '.6735116' Biased in favor of strain: ''
GRMZM2G084881	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.76814 x 10^-1	227	221	161	194	50.67%	54.65%	448	355	RefGen V2	χ2 p-value for B73 x Mo17: '.776814' χ2 p-value for Mo17 x B73: '.079867' Biased in favor of strain: ''
GRMZM2G084863	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.57844 x 10^-1	786	601	531	521	56.67%	49.52%	1387	1052	RefGen V2	χ2 p-value for B73 x Mo17: '6.78e-07' χ2 p-value for Mo17 x B73: '.757844' Biased in favor of strain: ''
GRMZM2G084863	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.35 x 10^-8	1098	326	371	517	77.11%	58.22%	1424	888	RefGen V2	χ2 p-value for B73 x Mo17: '6.43e-17' χ2 p-value for Mo17 x B73: '9.35e-08' Biased in favor of strain: 'B73'
GRMZM2G084859	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	0	100.00%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G084859	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.71 x 10^-27	147	3	121	1	98.00%	0.82%	150	122	RefGen V2	χ2 p-value for B73 x Mo17: '6.46e-32' χ2 p-value for Mo17 x B73: '1.71e-27' Biased in favor of strain: 'B73'
GRMZM2G084825	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G084825	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	4	0	1	0.00%	100.00%	4	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''

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