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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G26820 IREG3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.09774 x 10-1 150 118 57 36 55.97% 38.71% 268 93 TAIR8 Avg. embryo expression (dissected): '173.927'
Avg. embryo expression (LCM): '145.453'
AT5G26820 IREG3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.5663 x 10-2 24 17 58.54% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26820 IREG3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4 x 10-6 151 102 59.68% 253 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26820 IREG3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0588 x 10-2 280 60 82.35% 340 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G26810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.206303'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G26810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G26810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26805 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G26805 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.664231'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G26805 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G26805 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26805 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26805 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.3215 x 10-2 14 0 1 10 100.00% 90.91% 14 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.360765'
Avg. expression score for this sample: '49.7754'
Avg. expression score in LCM sample: '38.2734'
Tissue used: 'pure endosperm, no chalazal'
AT5G26800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 16 6 11 15 72.73% 57.69% 22 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.360765'
Avg. expression score for this sample: '36.0403'
Avg. expression score in LCM sample: '38.2734'
Tissue used: 'full endosperm'
AT5G26800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.7383 x 10-1 28 14 11 4 66.67% 26.67% 42 15 TAIR8 Avg. embryo expression (dissected): '140.239'
Avg. embryo expression (LCM): '209.314'
AT5G26800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.2137 x 10-1 35 16 68.63% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.5716 x 10-2 48 5 90.57% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.10132 x 10-1 11 0 7 16 100.00% 69.57% 11 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.606721'
Avg. expression score for this sample: '20.971'
Avg. expression score in LCM sample: '19.8275'
Tissue used: 'pure endosperm, no chalazal'
AT5G26790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 2 0 1 0.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.606721'
Avg. expression score for this sample: '1.71645'
Avg. expression score in LCM sample: '19.8275'
Tissue used: 'full endosperm'
AT5G26790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.57862 x 10-1 6 7 2 6 46.15% 75.00% 13 8 TAIR8 Avg. embryo expression (dissected): '24.972'
Avg. embryo expression (LCM): '45.977'
AT5G26790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26780 SHM2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 0 0 66.67% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '37.8396'
Avg. expression score in LCM sample: '16.2853'
Tissue used: 'pure endosperm, no chalazal'
AT5G26780 SHM2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 8 5 8 20 61.54% 71.43% 13 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '70.366'
Avg. expression score in LCM sample: '16.2853'
Tissue used: 'full endosperm'
AT5G26780 SHM2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.95098 x 10-1 6 4 1 2 60.00% 66.67% 10 3 TAIR8 Avg. embryo expression (dissected): '76.2875'
Avg. embryo expression (LCM): '70.2276'
AT5G26780 SHM2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.03243 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26780 SHM2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.49591 x 10-1 12 1 92.31% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26780 SHM2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.92987 x 10-1 15 2 88.24% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.74164 x 10-1 33 23 11 42 58.93% 79.25% 56 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000079'
Avg. expression score for this sample: '129.154'
Avg. expression score in LCM sample: '33.3349'
Tissue used: 'pure endosperm, no chalazal'
AT5G26770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 x 10-5 90 33 49 241 73.17% 83.10% 123 290 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000079'
Avg. expression score for this sample: '196.035'
Avg. expression score in LCM sample: '33.3349'
Tissue used: 'full endosperm'
AT5G26770 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.30801 x 10-1 19 28 2 2 40.43% 50.00% 47 4 TAIR8 Avg. embryo expression (dissected): '66.9367'
Avg. embryo expression (LCM): '57.8322'
AT5G26770 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.21416 x 10-1 33 6 84.62% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26770 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.424 x 10-3 74 7 91.36% 81 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26770 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.6429 x 10-2 50 6 89.29% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.63711 x 10-1 24 7 2 16 77.42% 88.89% 31 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005836'
Avg. expression score for this sample: '90.3613'
Avg. expression score in LCM sample: '68.4482'
Tissue used: 'pure endosperm, no chalazal'
AT5G26760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.1373 x 10-2 55 20 38 133 73.33% 77.78% 75 171 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005836'
Avg. expression score for this sample: '164.948'
Avg. expression score in LCM sample: '68.4482'
Tissue used: 'full endosperm'
AT5G26760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.5851 x 10-2 12 25 8 3 32.43% 27.27% 37 11 TAIR8 Avg. embryo expression (dissected): '107.276'
Avg. embryo expression (LCM): '91.9665'
AT5G26760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.32504 x 10-1 20 3 86.96% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.45177 x 10-1 927 301 75.49% 1228 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.15 x 10-4 323 173 65.12% 496 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26751 SK 11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.12238 x 10-1 9 5 3 24 64.29% 88.89% 14 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000542'
Avg. expression score for this sample: '122.619'
Avg. expression score in LCM sample: '112.042'
Tissue used: 'pure endosperm, no chalazal'
AT5G26751 SK 11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.25 x 10-4 41 8 11 65 83.67% 85.53% 49 76 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000542'
Avg. expression score for this sample: '216.462'
Avg. expression score in LCM sample: '112.042'
Tissue used: 'full endosperm'
AT5G26751 SK 11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 14 14 5 3 50.00% 37.50% 28 8 TAIR8 Avg. embryo expression (dissected): '168.029'
Avg. embryo expression (LCM): '149.673'
AT5G26751 SK 11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.64333 x 10-1 26 2 92.86% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26751 SK 11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1486 x 10-2 56 2 96.55% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26751 SK 11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.51898 x 10-1 123 16 88.49% 139 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26742 emb1138 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.12338 x 10-1 41 9 22 6 82.00% 21.43% 50 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000253'
Avg. expression score for this sample: '703.9'
Avg. expression score in LCM sample: '369.006'
Tissue used: 'pure endosperm, no chalazal'
AT5G26742 emb1138 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.47 x 10-4 61 10 93 31 85.92% 25.00% 71 124 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000253'
Avg. expression score for this sample: '756.738'
Avg. expression score in LCM sample: '369.006'
Tissue used: 'full endosperm'
AT5G26742 emb1138 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.17 x 10-4 155 49 31 7 75.98% 18.42% 204 38 TAIR8 Avg. embryo expression (dissected): '2695.31'
Avg. embryo expression (LCM): '2722.06'
AT5G26742 emb1138 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.17547 x 10-1 6 11 35.29% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26742 emb1138 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.9197 x 10-2 19 33 36.54% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26742 emb1138 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-14 88 7 92.63% 95 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '351.404'
Avg. expression score in LCM sample: '178.124'
Tissue used: 'pure endosperm, no chalazal'
AT5G26740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '477.129'
Avg. expression score in LCM sample: '178.124'
Tissue used: 'full endosperm'
AT5G26740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '246.601'
Avg. embryo expression (LCM): '135.608'
AT5G26740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26731 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 0 4 1 100.00% 20.00% 6 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.813738'
Avg. expression score for this sample: '48.0396'
Avg. expression score in LCM sample: '21.8852'
Tissue used: 'pure endosperm, no chalazal'
AT5G26731 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.7802 20 6 2 3 76.92% 60.00% 26 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.813738'
Avg. expression score for this sample: '46.1489'
Avg. expression score in LCM sample: '21.8852'
Tissue used: 'full endosperm'
AT5G26731 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 3 0 0 57.14% 7 0 TAIR8 Avg. embryo expression (dissected): '7.7674'
Avg. embryo expression (LCM): '18.6997'
AT5G26731 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26731 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26731 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '97.765'
Avg. expression score in LCM sample: '76.2087'
Tissue used: 'pure endosperm, no chalazal'
AT5G26730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '48.7132'
Avg. expression score in LCM sample: '76.2087'
Tissue used: 'full endosperm'
AT5G26730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '12.7748'
Avg. embryo expression (LCM): '4.64667'
AT5G26730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.04683 x 10-1 18 3 1 6 85.71% 85.71% 21 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.7e-10'
Avg. expression score for this sample: '19.0244'
Avg. expression score in LCM sample: '2.04301'
Tissue used: 'pure endosperm, no chalazal'
AT5G26720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.2 x 10-10 53 6 5 104 89.83% 95.41% 59 109 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.7e-10'
Avg. expression score for this sample: '49.4069'
Avg. expression score in LCM sample: '2.04301'
Tissue used: 'full endosperm'
AT5G26720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.0759 x 10-2 12 28 2 1 30.00% 33.33% 40 3 TAIR8 Avg. embryo expression (dissected): '25.5777'
Avg. embryo expression (LCM): '33.23'
AT5G26720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 17 1 94.44% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.7 x 10-10 73 42 63.48% 115 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2 x 10-5 79 28 73.83% 107 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26717 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.47583'
Avg. expression score in LCM sample: '6.70225'
Tissue used: 'pure endosperm, no chalazal'
AT5G26717 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.96638'
Avg. expression score in LCM sample: '6.70225'
Tissue used: 'full endosperm'
AT5G26717 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.74859'
Avg. embryo expression (LCM): '0'
AT5G26717 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26717 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26717 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 256 65 139 150 79.75% 51.90% 321 289 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.760504'
Avg. expression score for this sample: '856.732'
Avg. expression score in LCM sample: '576.893'
Tissue used: 'pure endosperm, no chalazal'
AT5G26710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.95311 x 10-1 348 73 233 292 82.66% 55.62% 421 525 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.760504'
Avg. expression score for this sample: '990.256'
Avg. expression score in LCM sample: '576.893'
Tissue used: 'full endosperm'
AT5G26710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.018 x 10-3 360 161 147 51 69.10% 25.76% 521 198 TAIR8 Avg. embryo expression (dissected): '1168.28'
Avg. embryo expression (LCM): '1118.6'
AT5G26710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.447 x 10-2 75 51 59.52% 126 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.2 x 10-6 426 318 57.26% 744 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 933 88 91.38% 1021 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.78551 x 10-1 4 2 9 12 66.67% 57.14% 6 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.472455'
Avg. expression score for this sample: '97.5363'
Avg. expression score in LCM sample: '16.9761'
Tissue used: 'pure endosperm, no chalazal'
AT5G26700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.09859 x 10-1 5 4 1 0 55.56% 0.00% 9 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.472455'
Avg. expression score for this sample: '69.8726'
Avg. expression score in LCM sample: '16.9761'
Tissue used: 'full endosperm'
AT5G26700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28308 x 10-1 4 3 1 5 57.14% 83.33% 7 6 TAIR8 Avg. embryo expression (dissected): '131.727'
Avg. embryo expression (LCM): '44.9597'
AT5G26700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.47992 x 10-1 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.7048 x 10-2 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'