GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G088231	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.19 x 10^-11	925	295	499	666	75.82%	57.17%	1220	1165	RefGen V2	χ2 p-value for B73 x Mo17: '1.19e-11' χ2 p-value for Mo17 x B73: '6.07e-12' Biased in favor of strain: 'B73'
GRMZM2G088231	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.4 x 10^-23	1162	727	1077	642	61.51%	37.35%	1889	1719	RefGen V2	χ2 p-value for B73 x Mo17: '1.40e-23' χ2 p-value for Mo17 x B73: '9.42e-26' Biased in favor of strain: 'B73'
GRMZM2G088218	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.630246 x 10^-1	5	6	9	12	45.45%	57.14%	11	21	RefGen V2	χ2 p-value for B73 x Mo17: '.7630246' χ2 p-value for Mo17 x B73: '.5126908' Biased in favor of strain: ''
GRMZM2G088218	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	2	4	7	66.67%	63.64%	6	11	RefGen V2	χ2 p-value for B73 x Mo17: '.9999887' χ2 p-value for Mo17 x B73: '.8311703' Biased in favor of strain: ''
GRMZM2G088212	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.7 x 10^-6	209	51	118	123	80.38%	51.04%	260	241	RefGen V2	χ2 p-value for B73 x Mo17: '2.70e-06' χ2 p-value for Mo17 x B73: '2.65e-07' Biased in favor of strain: 'B73'
GRMZM2G088212	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.33 x 10^-7	159	71	155	75	69.13%	32.61%	230	230	RefGen V2	χ2 p-value for B73 x Mo17: '6.53e-09' χ2 p-value for Mo17 x B73: '1.33e-07' Biased in favor of strain: 'B73'
GRMZM2G088162	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.99 x 10^-8	101	25	92	30	80.16%	24.59%	126	122	RefGen V2	χ2 p-value for B73 x Mo17: '1.28e-11' χ2 p-value for Mo17 x B73: '1.99e-08' Biased in favor of strain: 'B73'
GRMZM2G088162	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.02 x 10^-13	138	6	61	27	95.83%	30.68%	144	88	RefGen V2	χ2 p-value for B73 x Mo17: '1.13e-13' χ2 p-value for Mo17 x B73: '8.02e-13' Biased in favor of strain: 'B73'
GRMZM2G088140	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.1 x 10^-11	137	7	55	27	95.14%	32.93%	144	82	RefGen V2	χ2 p-value for B73 x Mo17: '4.24e-13' χ2 p-value for Mo17 x B73: '9.10e-11' Biased in favor of strain: 'B73'
GRMZM2G088140	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.254958 x 10^-1	38	35	45	51	52.05%	53.12%	73	96	RefGen V2	χ2 p-value for B73 x Mo17: '.7254958' χ2 p-value for Mo17 x B73: '.5402914' Biased in favor of strain: ''
GRMZM2G088138	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.083652 x 10^-1	8	14	9	8	36.36%	47.06%	22	17	RefGen V2	χ2 p-value for B73 x Mo17: '.2008251' χ2 p-value for Mo17 x B73: '.8083652' Biased in favor of strain: ''
GRMZM2G088138	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G088132	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	9	1	29	0.00%	96.67%	9	30	RefGen V2	χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '.0004909' Biased in favor of strain: ''
GRMZM2G088132	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.002894 x 10^-1	56	36	62	45	60.87%	42.06%	92	107	RefGen V2	χ2 p-value for B73 x Mo17: '.0370562' χ2 p-value for Mo17 x B73: '.1002894' Biased in favor of strain: ''
GRMZM2G088114	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.032652 x 10^-1	410	458	319	264	47.24%	45.28%	868	583	RefGen V2	χ2 p-value for B73 x Mo17: '.1032652' χ2 p-value for Mo17 x B73: '.0227345' Biased in favor of strain: ''
GRMZM2G088114	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	5.22 x 10^-12	238	238	258	288	50.00%	52.75%	476	546	RefGen V2	χ2 p-value for B73 x Mo17: '1.22e-14' χ2 p-value for Mo17 x B73: '5.22e-12' Biased in favor of strain: ''
GRMZM2G088088	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.69815 x 10^-1	17	34	35	64	33.33%	64.65%	51	99	RefGen V2	χ2 p-value for B73 x Mo17: '4.42e-07' χ2 p-value for Mo17 x B73: '.669815' Biased in favor of strain: ''
GRMZM2G088088	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.290345 x 10^-1	36	39	30	44	48.00%	59.46%	75	74	RefGen V2	χ2 p-value for B73 x Mo17: '.7290345' χ2 p-value for Mo17 x B73: '.103638' Biased in favor of strain: ''
GRMZM2G088086	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	297	47	326	51	86.34%	13.53%	344	377	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G088086	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.23476 x 10^-2	28	6	14	0	82.35%	0.00%	34	14	RefGen V2	χ2 p-value for B73 x Mo17: '.0523476' χ2 p-value for Mo17 x B73: '1.21e-07' Biased in favor of strain: ''
GRMZM2G088083	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.63 x 10^-5	222	61	139	107	78.45%	43.50%	283	246	RefGen V2	χ2 p-value for B73 x Mo17: '.0000263' χ2 p-value for Mo17 x B73: '1.27e-14' Biased in favor of strain: 'B73'
GRMZM2G088083	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.051 x 10^-4	221	130	158	100	62.96%	38.76%	351	258	RefGen V2	χ2 p-value for B73 x Mo17: '1.19e-06' χ2 p-value for Mo17 x B73: '.0003051' Biased in favor of strain: 'B73'
GRMZM2G088064	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.2 x 10^-27	4732	3408	2396	3212	58.13%	57.28%	8140	5608	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.20e-27' Biased in favor of strain: ''
GRMZM2G088064	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	21812	8851	12963	20285	71.13%	61.01%	30663	33248	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G088060	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.892677 x 10^-1	55	11	22	41	83.33%	65.08%	66	63	RefGen V2	χ2 p-value for B73 x Mo17: '.0040756' χ2 p-value for Mo17 x B73: '.7892677' Biased in favor of strain: ''
GRMZM2G088060	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.36351 x 10^-2	141	59	79	53	70.50%	40.15%	200	132	RefGen V2	χ2 p-value for B73 x Mo17: '6.70e-09' χ2 p-value for Mo17 x B73: '.0236351' Biased in favor of strain: 'B73'
GRMZM2G088028	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.130782 x 10^-1	127	162	119	139	43.94%	53.88%	289	258	RefGen V2	χ2 p-value for B73 x Mo17: '.0395111' χ2 p-value for Mo17 x B73: '.2130782' Biased in favor of strain: ''
GRMZM2G088028	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.601811 x 10^-1	30	23	9	24	56.60%	72.73%	53	33	RefGen V2	χ2 p-value for B73 x Mo17: '.1201613' χ2 p-value for Mo17 x B73: '.4601811' Biased in favor of strain: ''
GRMZM2G088020	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	1.402 x 10^-4	77	0	0	29	100.00%	100.00%	77	29	RefGen V2	χ2 p-value for B73 x Mo17: '5.48e-10' χ2 p-value for Mo17 x B73: '.0001402' Biased in favor of strain: ''
GRMZM2G088020	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		11	0	0	0	100.00%		11	0	RefGen V2	χ2 p-value for B73 x Mo17: '.0009111' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G088018	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.491 x 10^-3	298	191	239	184	60.94%	43.50%	489	423	RefGen V2	χ2 p-value for B73 x Mo17: '1.31e-06' χ2 p-value for Mo17 x B73: '.007491' Biased in favor of strain: 'B73'
GRMZM2G088018	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.365691 x 10^-1	115	54	15	32	68.05%	68.09%	169	47	RefGen V2	χ2 p-value for B73 x Mo17: '.7034337' χ2 p-value for Mo17 x B73: '.8365691' Biased in favor of strain: ''
GRMZM2G088014	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.960635 x 10^-1	175	89	90	162	66.29%	64.29%	264	252	RefGen V2	χ2 p-value for B73 x Mo17: '.8960635' χ2 p-value for Mo17 x B73: '.4226776' Biased in favor of strain: ''
GRMZM2G088014	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.236045 x 10^-1	341	285	159	163	54.47%	50.62%	626	322	RefGen V2	χ2 p-value for B73 x Mo17: '.0252074' χ2 p-value for Mo17 x B73: '.8236045' Biased in favor of strain: ''
GRMZM2G087955	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.74254 x 10^-2	15	28	20	8	34.88%	28.57%	43	28	RefGen V2	χ2 p-value for B73 x Mo17: '.0474254' χ2 p-value for Mo17 x B73: '.0233422' Biased in favor of strain: ''
GRMZM2G087955	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1898 x 10^-3	67	13	47	14	83.75%	22.95%	80	61	RefGen V2	χ2 p-value for B73 x Mo17: '.0011898' χ2 p-value for Mo17 x B73: '4.39e-13' Biased in favor of strain: 'B73'
GRMZM2G087944	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.53473 x 10^-2	257	5	0	10	98.09%	100.00%	262	10	RefGen V2	χ2 p-value for B73 x Mo17: '3.83e-27' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM2G087944	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.02 x 10^-9	28	96	0	101	22.58%	100.00%	124	101	RefGen V2	χ2 p-value for B73 x Mo17: '1.02e-09' χ2 p-value for Mo17 x B73: '9.20e-24' Biased in favor of strain: 'Mo17'
GRMZM2G087924	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.49 x 10^-4	200	127	176	115	61.16%	39.52%	327	291	RefGen V2	χ2 p-value for B73 x Mo17: '.0000542' χ2 p-value for Mo17 x B73: '.000349' Biased in favor of strain: 'B73'
GRMZM2G087924	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.902995 x 10^-1	144	46	97	174	75.79%	64.21%	190	271	RefGen V2	χ2 p-value for B73 x Mo17: '.0076421' χ2 p-value for Mo17 x B73: '.3902995' Biased in favor of strain: ''
GRMZM2G087918	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.2084 x 10^-3	188	62	97	86	75.20%	46.99%	250	183	RefGen V2	χ2 p-value for B73 x Mo17: '.0042084' χ2 p-value for Mo17 x B73: '1.65e-08' Biased in favor of strain: 'B73'
GRMZM2G087918	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.777164 x 10^-1	239	230	199	180	50.96%	47.49%	469	379	RefGen V2	χ2 p-value for B73 x Mo17: '.6777164' χ2 p-value for Mo17 x B73: '.3290821' Biased in favor of strain: ''
GRMZM2G087901	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.63478 x 10^-2	22	12	142	187	64.71%	56.84%	34	329	RefGen V2	χ2 p-value for B73 x Mo17: '.0863478' χ2 p-value for Mo17 x B73: '.013104' Biased in favor of strain: ''
GRMZM2G087901	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.838938 x 10^-1	11	4	168	214	73.33%	56.02%	15	382	RefGen V2	χ2 p-value for B73 x Mo17: '.5838938' χ2 p-value for Mo17 x B73: '.0000102' Biased in favor of strain: ''
GRMZM2G087896	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	0	3	50.00%	100.00%	4	3	RefGen V2	χ2 p-value for B73 x Mo17: '.4794928' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G087896	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.9 x 10^-5	166	79	123	68	67.76%	35.60%	245	191	RefGen V2	χ2 p-value for B73 x Mo17: '2.73e-08' χ2 p-value for Mo17 x B73: '.000069' Biased in favor of strain: 'B73'
GRMZM2G087893	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.25 x 10^-14	0	56	0	75	0.00%	100.00%	56	75	RefGen V2	χ2 p-value for B73 x Mo17: '7.25e-14' χ2 p-value for Mo17 x B73: '4.71e-18' Biased in favor of strain: 'Mo17'
GRMZM2G087893	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.64 x 10^-7	0	22	0	53	0.00%	100.00%	22	53	RefGen V2	χ2 p-value for B73 x Mo17: '3.28e-11' χ2 p-value for Mo17 x B73: '2.64e-07' Biased in favor of strain: 'Mo17'
GRMZM2G087878	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	3	3	50.00%	50.00%	2	6	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.3864762' Biased in favor of strain: ''
GRMZM2G087878	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.547208 x 10^-1	9	18	9	11	33.33%	55.00%	27	20	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''
GRMZM2G087875	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	1	100.00%	100.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G087875	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	1	1	100.00%	50.00%	3	2	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: ''
GRMZM2G087850	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.4252 x 10^-3	277	95	159	190	74.46%	54.44%	372	349	RefGen V2	χ2 p-value for B73 x Mo17: '.0014252' χ2 p-value for Mo17 x B73: '1.27e-06' Biased in favor of strain: 'B73'
GRMZM2G087850	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.86 x 10^-8	353	224	300	172	61.18%	36.44%	577	472	RefGen V2	χ2 p-value for B73 x Mo17: '7.86e-08' χ2 p-value for Mo17 x B73: '3.82e-09' Biased in favor of strain: 'B73'
GRMZM2G087824	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	22	4	4	29.03%	50.00%	31	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0195503' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G087824	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.328231 x 10^-1	225	142	64	106	61.31%	62.35%	367	170	RefGen V2	χ2 p-value for B73 x Mo17: '.0294189' χ2 p-value for Mo17 x B73: '.2328231' Biased in favor of strain: ''
GRMZM2G087817	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.266195 x 10^-1	638	353	811	797	64.38%	49.56%	991	1608	RefGen V2	χ2 p-value for B73 x Mo17: '.1266195' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G087817	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.4189 x 10^-3	346	267	395	291	56.44%	42.42%	613	686	RefGen V2	χ2 p-value for B73 x Mo17: '.0014189' χ2 p-value for Mo17 x B73: '.0000717' Biased in favor of strain: 'B73'
GRMZM2G087809	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.48 x 10^-11	53	3	60	7	94.64%	10.45%	56	67	RefGen V2	χ2 p-value for B73 x Mo17: '2.36e-11' χ2 p-value for Mo17 x B73: '9.48e-11' Biased in favor of strain: 'B73'
GRMZM2G087809	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.24361 x 10^-2	277	104	115	43	72.70%	27.22%	381	158	RefGen V2	χ2 p-value for B73 x Mo17: '.0124361' χ2 p-value for Mo17 x B73: '7.02e-26' Biased in favor of strain: ''
GRMZM2G087804	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G087804	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.907458 x 10^-1	26	12	26	27	68.42%	50.94%	38	53	RefGen V2	χ2 p-value for B73 x Mo17: '.0231409' χ2 p-value for Mo17 x B73: '.8907458' Biased in favor of strain: ''
GRMZM2G087787	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.06611 x 10^-2	460	384	301	367	54.50%	54.94%	844	668	RefGen V2	χ2 p-value for B73 x Mo17: '.0088959' χ2 p-value for Mo17 x B73: '.0106611' Biased in favor of strain: ''
GRMZM2G087787	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.393154 x 10^-1	302	144	254	334	67.71%	56.80%	446	588	RefGen V2	χ2 p-value for B73 x Mo17: '.6393154' χ2 p-value for Mo17 x B73: '3.90e-07' Biased in favor of strain: ''
GRMZM2G087769	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	0	2	83.33%	100.00%	6	2	RefGen V2	χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G087769	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G087749	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	2	6	3	60.00%	33.33%	5	9	RefGen V2	χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G087749	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.501066 x 10^-1	18	8	5	9	69.23%	64.29%	26	14	RefGen V2	χ2 p-value for B73 x Mo17: '.7815291' χ2 p-value for Mo17 x B73: '.8501066' Biased in favor of strain: ''
GRMZM2G087741	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.943573 x 10^-1	10	9	19	8	52.63%	29.63%	19	27	RefGen V2	χ2 p-value for B73 x Mo17: '.1943573' χ2 p-value for Mo17 x B73: '.0000446' Biased in favor of strain: ''
GRMZM2G087741	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.211662 x 10^-1	99	88	124	99	52.94%	44.39%	187	223	RefGen V2	χ2 p-value for B73 x Mo17: '.4211662' χ2 p-value for Mo17 x B73: '.0941063' Biased in favor of strain: ''
GRMZM2G087714	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	2	1	2	66.67%	66.67%	6	3	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G087714	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	3		75.00%	0	4	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G087692	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.63 x 10^-25	413	48	248	79	89.59%	24.16%	461	327	RefGen V2	χ2 p-value for B73 x Mo17: '1.63e-25' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G087692	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	348	88	296	61	79.82%	17.09%	436	357	RefGen V2	χ2 p-value for B73 x Mo17: '1.37e-35' χ2 p-value for Mo17 x B73: '1.64e-35' Biased in favor of strain: 'B73'
GRMZM2G087678	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.16 x 10^-7	156	39	107	46	80.00%	30.07%	195	153	RefGen V2	χ2 p-value for B73 x Mo17: '5.36e-17' χ2 p-value for Mo17 x B73: '8.16e-07' Biased in favor of strain: 'B73'
GRMZM2G087678	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.270891 x 10^-1	12	9	8	12	57.14%	60.00%	21	20	RefGen V2	χ2 p-value for B73 x Mo17: '.3545266' χ2 p-value for Mo17 x B73: '.5270891' Biased in favor of strain: ''
GRMZM2G087671	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.710437 x 10^-1	232	128	85	206	64.44%	70.79%	360	291	RefGen V2	χ2 p-value for B73 x Mo17: '.3710437' χ2 p-value for Mo17 x B73: '.1356343' Biased in favor of strain: ''
GRMZM2G087671	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.68925 x 10^-1	85	44	55	44	65.89%	44.44%	129	99	RefGen V2	χ2 p-value for B73 x Mo17: '.0003064' χ2 p-value for Mo17 x B73: '.268925' Biased in favor of strain: ''
GRMZM2G087662	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.48 x 10^-8	41	4	40	3	91.11%	6.98%	45	43	RefGen V2	χ2 p-value for B73 x Mo17: '3.48e-08' χ2 p-value for Mo17 x B73: '1.68e-08' Biased in favor of strain: 'B73'
GRMZM2G087662	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	3	2	12	50.00%	85.71%	6	14	RefGen V2	χ2 p-value for B73 x Mo17: '.3864683' χ2 p-value for Mo17 x B73: '.1305701' Biased in favor of strain: ''
GRMZM2G087651	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.65 x 10^-5	80	12	77	47	86.96%	37.90%	92	124	RefGen V2	χ2 p-value for B73 x Mo17: '.0000365' χ2 p-value for Mo17 x B73: '1.09e-11' Biased in favor of strain: 'B73'
GRMZM2G087651	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.2347 x 10^-3	126	42	63	34	75.00%	35.05%	168	97	RefGen V2	χ2 p-value for B73 x Mo17: '9.13e-11' χ2 p-value for Mo17 x B73: '.0032347' Biased in favor of strain: 'B73'
GRMZM2G087635	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.472212 x 10^-1	31	26	32	37	54.39%	53.62%	57	69	RefGen V2	χ2 p-value for B73 x Mo17: '.5078006' χ2 p-value for Mo17 x B73: '.5472212' Biased in favor of strain: ''
GRMZM2G087635	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.195644 x 10^-1	33	16	22	36	67.35%	62.07%	49	58	RefGen V2	χ2 p-value for B73 x Mo17: '.9195644' χ2 p-value for Mo17 x B73: '.4576138' Biased in favor of strain: ''
GRMZM2G087628	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.311943 x 10^-1	30	14	28	21	68.18%	42.86%	44	49	RefGen V2	χ2 p-value for B73 x Mo17: '.8311943' χ2 p-value for Mo17 x B73: '.000407' Biased in favor of strain: ''
GRMZM2G087628	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.207383 x 10^-1	53	18	51	50	74.65%	49.50%	71	101	RefGen V2	χ2 p-value for B73 x Mo17: '.0000327' χ2 p-value for Mo17 x B73: '.9207383' Biased in favor of strain: ''
GRMZM2G087612	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.675166 x 10^-1	302	301	323	303	50.08%	48.40%	603	626	RefGen V2	χ2 p-value for B73 x Mo17: '.9675166' χ2 p-value for Mo17 x B73: '.4240813' Biased in favor of strain: ''
GRMZM2G087612	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.54 x 10^-5	291	87	161	215	76.98%	57.18%	378	376	RefGen V2	χ2 p-value for B73 x Mo17: '.0000209' χ2 p-value for Mo17 x B73: '.0000954' Biased in favor of strain: 'B73'
GRMZM2G087608	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		39	1	8	0	97.50%	0.00%	40	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0000352' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: ''
GRMZM2G087608	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	3	0	50.00%	0.00%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G087600	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.359433 x 10^-1	171	102	119	138	62.64%	53.70%	273	257	RefGen V2	χ2 p-value for B73 x Mo17: '.0000297' χ2 p-value for Mo17 x B73: '.2359433' Biased in favor of strain: ''
GRMZM2G087600	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.6746 x 10^-2	149	39	80	113	79.26%	58.55%	188	193	RefGen V2	χ2 p-value for B73 x Mo17: '.0002507' χ2 p-value for Mo17 x B73: '.016746' Biased in favor of strain: ''
GRMZM2G087598	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.912547 x 10^-1	89	30	35	72	74.79%	67.29%	119	107	RefGen V2	χ2 p-value for B73 x Mo17: '.0601428' χ2 p-value for Mo17 x B73: '.8912547' Biased in favor of strain: ''
GRMZM2G087598	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.468858 x 10^-1	89	102	117	80	46.60%	40.61%	191	197	RefGen V2	χ2 p-value for B73 x Mo17: '.3468858' χ2 p-value for Mo17 x B73: '.0083855' Biased in favor of strain: ''
GRMZM2G087575	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.075 x 10^-4	15	0	15	0	100.00%	0.00%	15	15	RefGen V2	χ2 p-value for B73 x Mo17: '.0001075' χ2 p-value for Mo17 x B73: '.0001075' Biased in favor of strain: 'B73'
GRMZM2G087575	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	0	9	0	100.00%	0.00%	8	9	RefGen V2	χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: ''
GRMZM2G087570	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	1	3	66.67%	75.00%	3	4	RefGen V2	χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: ''
GRMZM2G087570	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	2		100.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G087552	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.50891 x 10^-2	45	23	22	35	66.18%	61.40%	68	57	RefGen V2	χ2 p-value for B73 x Mo17: '.0076329' χ2 p-value for Mo17 x B73: '.0850891' Biased in favor of strain: ''
GRMZM2G087552	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.30083 x 10^-2	36	8	15	86	81.82%	85.15%	44	101	RefGen V2	χ2 p-value for B73 x Mo17: '.0330083' χ2 p-value for Mo17 x B73: '.0000814' Biased in favor of strain: ''

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