Displaying data sets 23101 - 23200 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G27140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27140 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G27140 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27140 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27140 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27130 AGL39 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.258951'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27130 AGL39 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 1 0 2 80.00% 100.00% 5 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.29689'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27130 AGL39 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G27130 AGL39 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27130 AGL39 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27130 AGL39 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.14095 x 10-1 168 24 97 40 87.50% 29.20% 192 137 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.18805'
Avg. expression score for this sample: '82.5963'
Avg. expression score in LCM sample: '24.6631'
Tissue used: 'pure endosperm, no chalazal'
AT5G27120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.66712 x 10-1 246 48 144 92 83.67% 38.98% 294 236 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.18805'
Avg. expression score for this sample: '86.3839'
Avg. expression score in LCM sample: '24.6631'
Tissue used: 'full endosperm'
AT5G27120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.2 x 10-9 401 117 101 30 77.41% 22.90% 518 131 TAIR8 Avg. embryo expression (dissected): '240.92'
Avg. embryo expression (LCM): '422.923'
AT5G27120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.01873 x 10-1 7 7 50.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.6 x 10-10 163 208 43.94% 371 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 803 71 91.88% 874 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.35353 x 10-1 31 4 7 1 88.57% 12.50% 35 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.405269'
Avg. expression score for this sample: '7.07126'
Avg. expression score in LCM sample: '14.1688'
Tissue used: 'pure endosperm, no chalazal'
AT5G27110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.01552 x 10-1 69 16 49 25 81.18% 33.78% 85 74 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.405269'
Avg. expression score for this sample: '14.438'
Avg. expression score in LCM sample: '14.1688'
Tissue used: 'full endosperm'
AT5G27110 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.2 x 10-8 82 7 7 3 92.13% 30.00% 89 10 TAIR8 Avg. embryo expression (dissected): '20.4563'
Avg. embryo expression (LCM): '35.1012'
AT5G27110 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.4503 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27110 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1419 x 10-2 22 30 42.31% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27110 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 x 10-14 162 9 94.74% 171 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27100 GLR2.1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.10956'
Avg. expression score in LCM sample: '8.84814'
Tissue used: 'pure endosperm, no chalazal'
AT5G27100 GLR2.1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.45175'
Avg. expression score in LCM sample: '8.84814'
Tissue used: 'full endosperm'
AT5G27100 GLR2.1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.11828'
Avg. embryo expression (LCM): '3.11453'
AT5G27100 GLR2.1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27100 GLR2.1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27100 GLR2.1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27090 AGL54 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27090 AGL54 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.618218'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27090 AGL54 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G27090 AGL54 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27090 AGL54 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27090 AGL54 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27080 CDC20.3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.186208'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27080 CDC20.3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.129327'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27080 CDC20.3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G27080 CDC20.3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27080 CDC20.3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27080 CDC20.3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27070 AGL53 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.896101'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27070 AGL53 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.822611'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27070 AGL53 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '1.00923'
Avg. embryo expression (LCM): '4.37038'
AT5G27070 AGL53 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27070 AGL53 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27070 AGL53 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27060 RLP53 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.92075 x 10-1 0 4 0 3 0.00% 100.00% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.70428'
Avg. expression score in LCM sample: '2.55744'
Tissue used: 'pure endosperm, no chalazal'
AT5G27060 RLP53 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.23077 x 10-1 2 1 0 5 66.67% 100.00% 3 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.23883'
Avg. expression score in LCM sample: '2.55744'
Tissue used: 'full endosperm'
AT5G27060 RLP53 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '1.23856'
Avg. embryo expression (LCM): '2.18519'
AT5G27060 RLP53 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27060 RLP53 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.22114 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27060 RLP53 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.18083 x 10-1 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27050 AGL101 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27050 AGL101 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27050 AGL101 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G27050 AGL101 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27050 AGL101 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27050 AGL101 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27030 TPR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.66302 x 10-1 391 220 190 453 63.99% 70.45% 611 643 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.0e-06'
Avg. expression score for this sample: '185.892'
Avg. expression score in LCM sample: '163.573'
Tissue used: 'pure endosperm, no chalazal'
AT5G27030 TPR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.6 x 10-7 971 231 469 955 80.78% 67.06% 1202 1424 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.0e-06'
Avg. expression score for this sample: '264.194'
Avg. expression score in LCM sample: '163.573'
Tissue used: 'full endosperm'
AT5G27030 TPR3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.47416 x 10-1 258 222 75 56 53.75% 42.75% 480 131 TAIR8 Avg. embryo expression (dissected): '138.282'
Avg. embryo expression (LCM): '97.5676'
AT5G27030 TPR3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.948 x 10-3 291 78 78.86% 369 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27030 TPR3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.5 x 10-27 2288 1538 59.80% 3826 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27030 TPR3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 3236 606 84.23% 3842 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.97766'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.03233'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.11662'
Avg. embryo expression (LCM): '3.215'
AT5G27020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.576471'
Avg. expression score for this sample: '1.61198'
Avg. expression score in LCM sample: '.573219'
Tissue used: 'pure endosperm, no chalazal'
AT5G27010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.30769 x 10-1 4 0 0 3 100.00% 100.00% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.576471'
Avg. expression score for this sample: '3.29005'
Avg. expression score in LCM sample: '.573219'
Tissue used: 'full endosperm'
AT5G27010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.902672'
Avg. embryo expression (LCM): '.489785'
AT5G27010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.4545 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27000 ATK4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.0844 x 10-1 43 34 24 68 55.84% 73.91% 77 92 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '46.5595'
Avg. expression score in LCM sample: '70.3589'
Tissue used: 'pure endosperm, no chalazal'
AT5G27000 ATK4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.1552 x 10-1 24 16 37 90 60.00% 70.87% 40 127 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '38.7041'
Avg. expression score in LCM sample: '70.3589'
Tissue used: 'full endosperm'
AT5G27000 ATK4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.61512 x 10-1 27 36 15 16 42.86% 51.61% 63 31 TAIR8 Avg. embryo expression (dissected): '40.9492'
Avg. embryo expression (LCM): '41.1419'
AT5G27000 ATK4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27000 ATK4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.26994 x 10-1 888 392 69.38% 1280 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27000 ATK4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.23793 x 10-1 234 129 64.46% 363 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 6 5 15 64.71% 75.00% 17 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.266305'
Avg. expression score for this sample: '44.6114'
Avg. expression score in LCM sample: '30.8362'
Tissue used: 'pure endosperm, no chalazal'
AT5G26990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.59112 x 10-1 13 11 2 33 54.17% 94.29% 24 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.266305'
Avg. expression score for this sample: '105.386'
Avg. expression score in LCM sample: '30.8362'
Tissue used: 'full endosperm'
AT5G26990 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.80129 x 10-1 9 8 0 7 52.94% 100.00% 17 7 TAIR8 Avg. embryo expression (dissected): '43.079'
Avg. embryo expression (LCM): '79.0562'
AT5G26990 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26990 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4885 x 10-2 25 1 96.15% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26990 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.0 x 10-5 43 0 100.00% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26980 SYP41 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.16863 x 10-1 177 16 107 80 91.71% 42.78% 193 187 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.006996'
Avg. expression score for this sample: '58.4754'
Avg. expression score in LCM sample: '20.2684'
Tissue used: 'pure endosperm, no chalazal'
AT5G26980 SYP41 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.98 x 10-4 224 36 62 114 86.15% 64.77% 260 176 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.006996'
Avg. expression score for this sample: '51.0101'
Avg. expression score in LCM sample: '20.2684'
Tissue used: 'full endosperm'
AT5G26980 SYP41 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.18566 x 10-1 100 50 39 7 66.67% 15.22% 150 46 TAIR8 Avg. embryo expression (dissected): '42.9455'
Avg. embryo expression (LCM): '20.9351'
AT5G26980 SYP41 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.22644 x 10-1 35 17 67.31% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26980 SYP41 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.68377 x 10-1 165 56 74.66% 221 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26980 SYP41 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.8 x 10-22 435 29 93.75% 464 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G26970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.51642 x 10-1 12 6 0 6 66.67% 100.00% 18 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.017558'
Avg. expression score for this sample: '21.3246'
Avg. expression score in LCM sample: '9.00982'
Tissue used: 'pure endosperm, no chalazal'
AT5G26970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.5755 x 10-2 48 12 1 17 80.00% 94.44% 60 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.017558'
Avg. expression score for this sample: '52.3058'
Avg. expression score in LCM sample: '9.00982'
Tissue used: 'full endosperm'
AT5G26970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.33213 x 10-1 1 13 0 5 7.14% 100.00% 14 5 TAIR8 Avg. embryo expression (dissected): '25.6666'
Avg. embryo expression (LCM): '34.6742'
AT5G26970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.89481 x 10-1 9 4 69.23% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'