GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G089056	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.497116 x 10^-1	40	16	17	66	71.43%	79.52%	56	83	RefGen V2	χ2 p-value for B73 x Mo17: '.4497116' χ2 p-value for Mo17 x B73: '.0130032' Biased in favor of strain: ''
GRMZM2G089056	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.600471 x 10^-1	56	50	53	75	52.83%	58.59%	106	128	RefGen V2	χ2 p-value for B73 x Mo17: '.5600471' χ2 p-value for Mo17 x B73: '.0518299' Biased in favor of strain: ''
GRMZM2G089050	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.012878 x 10^-1	51	32	32	33	61.45%	50.77%	83	65	RefGen V2	χ2 p-value for B73 x Mo17: '.037022' χ2 p-value for Mo17 x B73: '.9012878' Biased in favor of strain: ''
GRMZM2G089050	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.48602 x 10^-2	86	29	46	62	74.78%	57.41%	115	108	RefGen V2	χ2 p-value for B73 x Mo17: '.0648602' χ2 p-value for Mo17 x B73: '.0412268' Biased in favor of strain: ''
GRMZM2G089021	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.16 x 10^-17	26	141	64	378	15.57%	85.52%	167	442	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '4.16e-17' Biased in favor of strain: 'Mo17'
GRMZM2G089021	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.510045 x 10^-1	308	187	264	243	62.22%	47.93%	495	507	RefGen V2	χ2 p-value for B73 x Mo17: '5.37e-08' χ2 p-value for Mo17 x B73: '.3510045' Biased in favor of strain: ''
GRMZM2G089010	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.662 x 10^-3	166	108	157	106	60.58%	40.30%	274	263	RefGen V2	χ2 p-value for B73 x Mo17: '.0004585' χ2 p-value for Mo17 x B73: '.001662' Biased in favor of strain: 'B73'
GRMZM2G089010	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.829341 x 10^-1	77	26	33	52	74.76%	61.18%	103	85	RefGen V2	χ2 p-value for B73 x Mo17: '.0815452' χ2 p-value for Mo17 x B73: '.2829341' Biased in favor of strain: ''
GRMZM2G088995	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	2	5	3	66.67%	37.50%	6	8	RefGen V2	χ2 p-value for B73 x Mo17: '.9999887' χ2 p-value for Mo17 x B73: '.0801183' Biased in favor of strain: ''
GRMZM2G088995	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		11	3	7	1	78.57%	12.50%	14	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0325094' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: ''
GRMZM2G088980	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	4	0.00%	100.00%	3	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G088980	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G088974	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	3	3	83.33%	50.00%	6	6	RefGen V2	χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.3864762' Biased in favor of strain: ''
GRMZM2G088974	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	3	2	75.00%	40.00%	4	5	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''
GRMZM2G088961	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.79847 x 10^-2	649	710	663	862	47.76%	56.52%	1359	1525	RefGen V2	χ2 p-value for B73 x Mo17: '.0979847' χ2 p-value for Mo17 x B73: '3.47e-07' Biased in favor of strain: ''
GRMZM2G088961	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.99471 x 10^-2	166	107	74	211	60.81%	74.04%	273	285	RefGen V2	χ2 p-value for B73 x Mo17: '.0399471' χ2 p-value for Mo17 x B73: '.0083205' Biased in favor of strain: ''
GRMZM2G088951	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.99 x 10^-8	63	0	42	3	100.00%	6.67%	63	45	RefGen V2	χ2 p-value for B73 x Mo17: '1.99e-08' χ2 p-value for Mo17 x B73: '1.36e-17' Biased in favor of strain: 'B73'
GRMZM2G088951	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.09213 x 10^-2	24	0	10	2	100.00%	16.67%	24	12	RefGen V2	χ2 p-value for B73 x Mo17: '9.63e-07' χ2 p-value for Mo17 x B73: '.0209213' Biased in favor of strain: 'B73'
GRMZM2G088874	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.610542 x 10^-1	71	47	63	51	60.17%	44.74%	118	114	RefGen V2	χ2 p-value for B73 x Mo17: '.0271483' χ2 p-value for Mo17 x B73: '.2610542' Biased in favor of strain: ''
GRMZM2G088874	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.936961 x 10^-1	177	84	90	198	67.82%	68.75%	261	288	RefGen V2	χ2 p-value for B73 x Mo17: '.6936961' χ2 p-value for Mo17 x B73: '.4532552' Biased in favor of strain: ''
GRMZM2G088870	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.050419 x 10^-1	59	19	24	31	75.64%	56.36%	78	55	RefGen V2	χ2 p-value for B73 x Mo17: '.0927028' χ2 p-value for Mo17 x B73: '.1050419' Biased in favor of strain: ''
GRMZM2G088870	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.568392 x 10^-1	11	17	15	9	39.29%	37.50%	28	24	RefGen V2	χ2 p-value for B73 x Mo17: '.2568392' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G088861	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.752335 x 10^-1	13	8	14	2	61.90%	12.50%	21	16	RefGen V2	χ2 p-value for B73 x Mo17: '.2752335' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: ''
GRMZM2G088861	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	12	15		55.56%	0	27	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G088843	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.635526 x 10^-1	10	19	10	30	34.48%	75.00%	29	40	RefGen V2	χ2 p-value for B73 x Mo17: '.0002363' χ2 p-value for Mo17 x B73: '.2635526' Biased in favor of strain: ''
GRMZM2G088843	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.414183 x 10^-1	58	50	40	52	53.70%	56.52%	108	92	RefGen V2	χ2 p-value for B73 x Mo17: '.4414183' χ2 p-value for Mo17 x B73: '.2109029' Biased in favor of strain: ''
GRMZM2G088828	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.87817 x 10^-2	17	2	19	9	89.47%	32.14%	19	28	RefGen V2	χ2 p-value for B73 x Mo17: '.0005791' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: ''
GRMZM2G088828	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	0	4	3	100.00%	42.86%	6	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.1814491' Biased in favor of strain: ''
GRMZM2G088783	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	0	0	75.00%		4	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G088783	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.14 x 10^-7	316	196	406	245	61.72%	37.63%	512	651	RefGen V2	χ2 p-value for B73 x Mo17: '1.14e-07' χ2 p-value for Mo17 x B73: '2.79e-10' Biased in favor of strain: 'B73'
GRMZM2G088727	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.4 x 10^-17	286	78	232	81	78.57%	25.88%	364	313	RefGen V2	χ2 p-value for B73 x Mo17: '1.13e-27' χ2 p-value for Mo17 x B73: '1.40e-17' Biased in favor of strain: 'B73'
GRMZM2G088727	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.23 x 10^-5	343	106	236	280	76.39%	54.26%	449	516	RefGen V2	χ2 p-value for B73 x Mo17: '.0000123' χ2 p-value for Mo17 x B73: '2.28e-09' Biased in favor of strain: 'B73'
GRMZM2G088689	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.21 x 10^-15	386	71	167	139	84.46%	45.42%	457	306	RefGen V2	χ2 p-value for B73 x Mo17: '6.99e-16' χ2 p-value for Mo17 x B73: '3.21e-15' Biased in favor of strain: 'B73'
GRMZM2G088689	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	711	173	710	222	80.43%	23.82%	884	932	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G088669	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.955329 x 10^-1	81	89	117	115	47.65%	49.57%	170	232	RefGen V2	χ2 p-value for B73 x Mo17: '.5394982' χ2 p-value for Mo17 x B73: '.8955329' Biased in favor of strain: ''
GRMZM2G088669	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.994073 x 10^-1	18	11	15	13	62.07%	46.43%	29	28	RefGen V2	χ2 p-value for B73 x Mo17: '.5994073' χ2 p-value for Mo17 x B73: '.0231034' Biased in favor of strain: ''
GRMZM2G088653	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.22 x 10^-5	288	336	153	459	46.15%	75.00%	624	612	RefGen V2	χ2 p-value for B73 x Mo17: '1.60e-27' χ2 p-value for Mo17 x B73: '.0000122' Biased in favor of strain: 'Mo17'
GRMZM2G088653	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.69 x 10^-8	238	378	168	346	38.64%	67.32%	616	514	RefGen V2	χ2 p-value for B73 x Mo17: '1.69e-08' χ2 p-value for Mo17 x B73: '4.12e-15' Biased in favor of strain: 'Mo17'
GRMZM2G088648	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	623	141	699	150	81.54%	17.67%	764	849	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G088648	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.3 x 10^-10	322	74	176	128	81.31%	42.11%	396	304	RefGen V2	χ2 p-value for B73 x Mo17: '6.30e-10' χ2 p-value for Mo17 x B73: '1.04e-19' Biased in favor of strain: 'B73'
GRMZM2G088627	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0753 x 10^-3	129	123	109	313	51.19%	74.17%	252	422	RefGen V2	χ2 p-value for B73 x Mo17: '1.87e-07' χ2 p-value for Mo17 x B73: '.0010753' Biased in favor of strain: 'Mo17'
GRMZM2G088627	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0461 x 10^-3	297	396	356	449	42.86%	55.78%	693	805	RefGen V2	χ2 p-value for B73 x Mo17: '.0001694' χ2 p-value for Mo17 x B73: '.0010461' Biased in favor of strain: 'Mo17'
GRMZM2G088590	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.72 x 10^-10	344	145	276	145	70.35%	34.44%	489	421	RefGen V2	χ2 p-value for B73 x Mo17: '2.28e-19' χ2 p-value for Mo17 x B73: '1.72e-10' Biased in favor of strain: 'B73'
GRMZM2G088590	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.65 x 10^-13	292	52	192	63	84.88%	24.71%	344	255	RefGen V2	χ2 p-value for B73 x Mo17: '7.65e-13' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G088565	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	0	1	7	100.00%	87.50%	6	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.2112996' Biased in favor of strain: ''
GRMZM2G088565	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.95346 x 10^-2	63	28	51	33	69.23%	39.29%	91	84	RefGen V2	χ2 p-value for B73 x Mo17: '.0002435' χ2 p-value for Mo17 x B73: '.0495346' Biased in favor of strain: 'B73'
GRMZM2G088549	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.945247 x 10^-1	155	61	56	49	71.76%	46.67%	216	105	RefGen V2	χ2 p-value for B73 x Mo17: '1.60e-10' χ2 p-value for Mo17 x B73: '.4945247' Biased in favor of strain: ''
GRMZM2G088549	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.18101 x 10^-2	215	69	76	108	75.70%	58.70%	284	184	RefGen V2	χ2 p-value for B73 x Mo17: '.0012345' χ2 p-value for Mo17 x B73: '.0218101' Biased in favor of strain: ''
GRMZM2G088539	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.03 x 10^-9	150	20	57	34	88.24%	37.36%	170	91	RefGen V2	χ2 p-value for B73 x Mo17: '2.44e-09' χ2 p-value for Mo17 x B73: '3.03e-09' Biased in favor of strain: 'B73'
GRMZM2G088539	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.12 x 10^-16	223	71	205	68	75.85%	24.91%	294	273	RefGen V2	χ2 p-value for B73 x Mo17: '7.66e-19' χ2 p-value for Mo17 x B73: '1.12e-16' Biased in favor of strain: 'B73'
GRMZM2G088524	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2091	130	1921	211	94.15%	9.90%	2221	2132	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G088524	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.85 x 10^-12	241	38	140	50	86.38%	26.32%	279	190	RefGen V2	χ2 p-value for B73 x Mo17: '2.85e-12' χ2 p-value for Mo17 x B73: '3.96e-32' Biased in favor of strain: 'B73'
GRMZM2G088511	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.911729 x 10^-1	169	56	84	188	75.11%	69.12%	225	272	RefGen V2	χ2 p-value for B73 x Mo17: '.0072109' χ2 p-value for Mo17 x B73: '.3911729' Biased in favor of strain: ''
GRMZM2G088511	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.04559 x 10^-2	172	137	142	172	55.66%	54.78%	309	314	RefGen V2	χ2 p-value for B73 x Mo17: '.046472' χ2 p-value for Mo17 x B73: '.0904559' Biased in favor of strain: ''
GRMZM2G088501	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.0592 x 10^-3	34	9	26	9	79.07%	25.71%	43	35	RefGen V2	χ2 p-value for B73 x Mo17: '.0001376' χ2 p-value for Mo17 x B73: '.0040592' Biased in favor of strain: 'B73'
GRMZM2G088501	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G088487	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.059286 x 10^-1	84	24	41	72	77.78%	63.72%	108	113	RefGen V2	χ2 p-value for B73 x Mo17: '.0143075' χ2 p-value for Mo17 x B73: '.5059286' Biased in favor of strain: ''
GRMZM2G088487	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.961127 x 10^-1	56	44	47	42	56.00%	47.19%	100	89	RefGen V2	χ2 p-value for B73 x Mo17: '.2301393' χ2 p-value for Mo17 x B73: '.5961127' Biased in favor of strain: ''
GRMZM2G088482	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	5	2	5	37.50%	71.43%	8	7	RefGen V2	χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: ''
GRMZM2G088482	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	5	4	10	37.50%	71.43%	8	14	RefGen V2	χ2 p-value for B73 x Mo17: '.080115' χ2 p-value for Mo17 x B73: '.7054571' Biased in favor of strain: ''
GRMZM2G088469	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2786	180	600	227	93.93%	27.45%	2966	827	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G088469	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.2904 x 10^-3	165	37	52	28	81.68%	35.00%	202	80	RefGen V2	χ2 p-value for B73 x Mo17: '2.14e-19' χ2 p-value for Mo17 x B73: '.0072904' Biased in favor of strain: 'B73'
GRMZM2G088443	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.496918 x 10^-1	16	12	26	10	57.14%	27.78%	28	36	RefGen V2	χ2 p-value for B73 x Mo17: '.4496918' χ2 p-value for Mo17 x B73: '.0076608' Biased in favor of strain: ''
GRMZM2G088443	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G088409	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.32 x 10^-27	321	20	187	76	94.13%	28.90%	341	263	RefGen V2	χ2 p-value for B73 x Mo17: '5.32e-27' χ2 p-value for Mo17 x B73: '1.33e-38' Biased in favor of strain: 'B73'
GRMZM2G088409	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.3 x 10^-28	173	20	188	19	89.64%	9.18%	193	207	RefGen V2	χ2 p-value for B73 x Mo17: '3.30e-28' χ2 p-value for Mo17 x B73: '7.38e-32' Biased in favor of strain: 'B73'
GRMZM2G088396	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1511	751	1520	939	66.80%	38.19%	2262	2459	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.05e-31' Biased in favor of strain: 'B73'
GRMZM2G088396	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.755327 x 10^-1	127	81	49	114	61.06%	69.94%	208	163	RefGen V2	χ2 p-value for B73 x Mo17: '.0861455' χ2 p-value for Mo17 x B73: '.3755327' Biased in favor of strain: ''
GRMZM2G088365	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.99242 x 10^-2	200	127	52	73	61.16%	58.40%	327	125	RefGen V2	χ2 p-value for B73 x Mo17: '.0347156' χ2 p-value for Mo17 x B73: '.0499242' Biased in favor of strain: ''
GRMZM2G088365	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.9177 x 10^-3	175	74	56	94	70.28%	62.67%	249	150	RefGen V2	χ2 p-value for B73 x Mo17: '1.55e-10' χ2 p-value for Mo17 x B73: '.0019177' Biased in favor of strain: ''
GRMZM2G088361	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.6037 x 10^-3	458	230	339	265	66.57%	43.87%	688	604	RefGen V2	χ2 p-value for B73 x Mo17: '3.55e-18' χ2 p-value for Mo17 x B73: '.0026037' Biased in favor of strain: 'B73'
GRMZM2G088361	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.827325 x 10^-1	218	136	134	244	61.58%	64.55%	354	378	RefGen V2	χ2 p-value for B73 x Mo17: '.0424033' χ2 p-value for Mo17 x B73: '.3827325' Biased in favor of strain: ''
GRMZM2G088356	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.206791 x 10^-1	21	6	14	5	77.78%	26.32%	27	19	RefGen V2	χ2 p-value for B73 x Mo17: '.2206791' χ2 p-value for Mo17 x B73: '.0001907' Biased in favor of strain: ''
GRMZM2G088356	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.3406 x 10^-3	13	1	19	1	92.86%	5.00%	14	20	RefGen V2	χ2 p-value for B73 x Mo17: '.0013406' χ2 p-value for Mo17 x B73: '.000057' Biased in favor of strain: 'B73'
GRMZM2G088349	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.70999 x 10^-2	42	21	21	11	66.67%	34.38%	63	32	RefGen V2	χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0770999' Biased in favor of strain: ''
GRMZM2G088349	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999998 x 10^-1	33	5	5	10	86.84%	66.67%	38	15	RefGen V2	χ2 p-value for B73 x Mo17: '.0083333' χ2 p-value for Mo17 x B73: '.9999998' Biased in favor of strain: ''
GRMZM2G088336	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.005233 x 10^-1	10	7	11	21	58.82%	65.62%	17	32	RefGen V2	χ2 p-value for B73 x Mo17: '.4927029' χ2 p-value for Mo17 x B73: '.9005233' Biased in favor of strain: ''
GRMZM2G088336	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	8	8	15	5	50.00%	25.00%	16	20	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM2G088320	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5654 x 10^-3	0	10	0	19	0.00%	100.00%	10	19	RefGen V2	χ2 p-value for B73 x Mo17: '.0015654' χ2 p-value for Mo17 x B73: '.0000131' Biased in favor of strain: 'Mo17'
GRMZM2G088320	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.96 x 10^-4	0	12	0	23	0.00%	100.00%	12	23	RefGen V2	χ2 p-value for B73 x Mo17: '9.63e-07' χ2 p-value for Mo17 x B73: '.000696' Biased in favor of strain: 'Mo17'
GRMZM2G088313	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.402792 x 10^-1	7	5	8	11	58.33%	57.89%	12	19	RefGen V2	χ2 p-value for B73 x Mo17: '.5402792' χ2 p-value for Mo17 x B73: '.417304' Biased in favor of strain: ''
GRMZM2G088313	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.07 x 10^-4	125	75	32	87	62.50%	73.11%	200	119	RefGen V2	χ2 p-value for B73 x Mo17: '.000407' χ2 p-value for Mo17 x B73: '4.61e-07' Biased in favor of strain: ''
GRMZM2G088299	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.08556 x 10^-2	50	34	31	15	59.52%	32.61%	84	46	RefGen V2	χ2 p-value for B73 x Mo17: '.0808556' χ2 p-value for Mo17 x B73: '.0183207' Biased in favor of strain: ''
GRMZM2G088299	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.01 x 10^-8	108	10	44	16	91.53%	26.67%	118	60	RefGen V2	χ2 p-value for B73 x Mo17: '1.01e-08' χ2 p-value for Mo17 x B73: '4.94e-11' Biased in favor of strain: 'B73'
GRMZM2G088293	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		19	0	0	0	100.00%		19	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G088293	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G088291	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.059032 x 10^-1	16	24	13	27	40.00%	67.50%	40	40	RefGen V2	χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '.0268567' Biased in favor of strain: ''
GRMZM2G088291	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		13	4	1	8	76.47%	88.89%	17	9	RefGen V2	χ2 p-value for B73 x Mo17: '.3911817' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G088290	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.05066 x 10^-2	470	169	195	324	73.55%	62.43%	639	519	RefGen V2	χ2 p-value for B73 x Mo17: '.0002222' χ2 p-value for Mo17 x B73: '.0405066' Biased in favor of strain: ''
GRMZM2G088290	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.340352 x 10^-1	139	96	104	101	59.15%	49.27%	235	205	RefGen V2	χ2 p-value for B73 x Mo17: '.0050315' χ2 p-value for Mo17 x B73: '.8340352' Biased in favor of strain: ''
GRMZM2G088286	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	16	0	8	0.00%	100.00%	16	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G088286	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5654 x 10^-3	0	12	0	20	0.00%	100.00%	12	20	RefGen V2	χ2 p-value for B73 x Mo17: '9.63e-07' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: 'Mo17'
GRMZM2G088261	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	2	2	1	33.33%	33.33%	3	3	RefGen V2	χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: ''
GRMZM2G088261	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	5	6	4	44.44%	40.00%	9	10	RefGen V2	χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.5270892' Biased in favor of strain: ''
GRMZM2G088258	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		16	3	7	1	84.21%	12.50%	19	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0028599' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: ''
GRMZM2G088258	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		72	12	4	2	85.71%	33.33%	84	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0002129' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G088243	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.09 x 10^-5	41	1	18	2	97.62%	10.00%	42	20	RefGen V2	χ2 p-value for B73 x Mo17: '.0000209' χ2 p-value for Mo17 x B73: '7.62e-08' Biased in favor of strain: 'B73'
GRMZM2G088243	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.37517 x 10^-2	183	60	123	90	75.31%	42.25%	243	213	RefGen V2	χ2 p-value for B73 x Mo17: '3.01e-15' χ2 p-value for Mo17 x B73: '.0237517' Biased in favor of strain: 'B73'
GRMZM2G088235	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.63071 x 10^-1	49	63	49	42	43.75%	46.15%	112	91	RefGen V2	χ2 p-value for B73 x Mo17: '.1858767' χ2 p-value for Mo17 x B73: '.463071' Biased in favor of strain: ''
GRMZM2G088235	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.794839 x 10^-1	15	10	4	14	60.00%	77.78%	25	18	RefGen V2	χ2 p-value for B73 x Mo17: '.4794839' χ2 p-value for Mo17 x B73: '.3173106' Biased in favor of strain: ''

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