Displaying data sets 23001 - 23100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G27330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.41672 x 10-1 2420 2257 700 700 51.74% 50.00% 4677 1400 TAIR8 Avg. embryo expression (dissected): '2959.7'
Avg. embryo expression (LCM): '2758.81'
AT5G27330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.20927 x 10-1 301 191 61.18% 492 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 92479 37615 71.09% 130094 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 27896 21182 56.84% 49078 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27320 GID1C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 1 5 66.67% 83.33% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.384085'
Avg. expression score for this sample: '12.7243'
Avg. expression score in LCM sample: '8.83345'
Tissue used: 'pure endosperm, no chalazal'
AT5G27320 GID1C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.11194 x 10-1 1 2 2 13 33.33% 86.67% 3 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.384085'
Avg. expression score for this sample: '10.6602'
Avg. expression score in LCM sample: '8.83345'
Tissue used: 'full endosperm'
AT5G27320 GID1C embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 6 1 1 45.45% 50.00% 11 2 TAIR8 Avg. embryo expression (dissected): '25.2406'
Avg. embryo expression (LCM): '12.8349'
AT5G27320 GID1C endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.3393 x 10-2 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27320 GID1C endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.62663 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27320 GID1C endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.674 x 10-3 0 4 0.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.313001'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G27310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 26 12 10 20 68.42% 66.67% 38 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '58.3863'
Avg. expression score in LCM sample: '17.3729'
Tissue used: 'pure endosperm, no chalazal'
AT5G27300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 51 25 23 45 67.11% 66.18% 76 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '76.1007'
Avg. expression score in LCM sample: '17.3729'
Tissue used: 'full endosperm'
AT5G27300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.88408 x 10-1 42 47 12 10 47.19% 45.45% 89 22 TAIR8 Avg. embryo expression (dissected): '133.547'
Avg. embryo expression (LCM): '80.8144'
AT5G27300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.24172 x 10-1 26 8 76.47% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.13 x 10-4 58 7 89.23% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.30317 x 10-1 40 26 26 47 60.61% 64.38% 66 73 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.771471'
Avg. expression score for this sample: '80.8473'
Avg. expression score in LCM sample: '26.4709'
Tissue used: 'pure endosperm, no chalazal'
AT5G27290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.79016 x 10-1 36 14 17 31 72.00% 64.58% 50 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.771471'
Avg. expression score for this sample: '50.2599'
Avg. expression score in LCM sample: '26.4709'
Tissue used: 'full endosperm'
AT5G27290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.41957 x 10-1 55 70 30 67 44.00% 69.07% 125 97 TAIR8 Avg. embryo expression (dissected): '184.474'
Avg. embryo expression (LCM): '65.8949'
AT5G27290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.55928 x 10-1 24 14 63.16% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.08079 x 10-1 14 6 70.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.66582 x 10-1 20 14 58.82% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.37502 x 10-1 58 25 20 46 69.88% 69.70% 83 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.073967'
Avg. expression score for this sample: '214.039'
Avg. expression score in LCM sample: '105.237'
Tissue used: 'pure endosperm, no chalazal'
AT5G27280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.3402 x 10-2 48 17 17 68 73.85% 80.00% 65 85 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.073967'
Avg. expression score for this sample: '205.991'
Avg. expression score in LCM sample: '105.237'
Tissue used: 'full endosperm'
AT5G27280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 20 20 5 5 50.00% 50.00% 40 10 TAIR8 Avg. embryo expression (dissected): '85.2134'
Avg. embryo expression (LCM): '38.7558'
AT5G27280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.621 x 10-3 35 2 94.59% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0941 x 10-2 60 8 88.24% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.916 x 10-3 88 13 87.13% 101 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27270 EMB976 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.01804 x 10-1 137 82 59 121 62.56% 67.22% 219 180 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.076581'
Avg. expression score for this sample: '55.5085'
Avg. expression score in LCM sample: '17.9755'
Tissue used: 'pure endosperm, no chalazal'
AT5G27270 EMB976 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.306 x 10-3 232 115 115 379 66.86% 76.72% 347 494 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.076581'
Avg. expression score for this sample: '77.3596'
Avg. expression score in LCM sample: '17.9755'
Tissue used: 'full endosperm'
AT5G27270 EMB976 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.43595 x 10-1 217 244 64 73 47.07% 53.28% 461 137 TAIR8 Avg. embryo expression (dissected): '115.544'
Avg. embryo expression (LCM): '72.1741'
AT5G27270 EMB976 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.8 x 10-5 91 13 87.50% 104 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27270 EMB976 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0 x 10-12 240 28 89.55% 268 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27270 EMB976 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1 x 10-18 389 44 89.84% 433 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G27260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27247 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27247 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27247 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G27247 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27247 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27247 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.76698 x 10-1 39 31 22 44 55.71% 66.67% 70 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.821222'
Avg. expression score for this sample: '56.7119'
Avg. expression score in LCM sample: '28.3817'
Tissue used: 'pure endosperm, no chalazal'
AT5G27240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.00888 x 10-1 69 22 54 119 75.82% 68.79% 91 173 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.821222'
Avg. expression score for this sample: '88.928'
Avg. expression score in LCM sample: '28.3817'
Tissue used: 'full endosperm'
AT5G27240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.66051 x 10-1 50 71 11 20 41.32% 64.52% 121 31 TAIR8 Avg. embryo expression (dissected): '103.451'
Avg. embryo expression (LCM): '110.277'
AT5G27240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.06133 x 10-1 12 3 80.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.1 x 10-11 111 5 95.69% 116 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0 x 10-5 160 31 83.77% 191 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27238 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.483801'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27238 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27238 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G27238 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27238 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 16 0 100.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27238 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 19 9 67.86% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.02981 x 10-1 42 30 29 33 58.33% 53.23% 72 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007875'
Avg. expression score for this sample: '29.8133'
Avg. expression score in LCM sample: '9.59774'
Tissue used: 'pure endosperm, no chalazal'
AT5G27230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.0415 x 10-2 120 59 84 87 67.04% 50.88% 179 171 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007875'
Avg. expression score for this sample: '45.8041'
Avg. expression score in LCM sample: '9.59774'
Tissue used: 'full endosperm'
AT5G27230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.4355 x 10-2 216 128 53 38 62.79% 41.76% 344 91 TAIR8 Avg. embryo expression (dissected): '130.224'
Avg. embryo expression (LCM): '116.795'
AT5G27230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.11911 x 10-1 7 10 41.18% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.4043 x 10-2 265 145 64.63% 410 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.55 x 10-4 439 203 68.38% 642 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.2381 x 10-2 188 160 78 171 54.02% 68.67% 348 249 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.013526'
Avg. expression score for this sample: '86.6476'
Avg. expression score in LCM sample: '5.80568'
Tissue used: 'pure endosperm, no chalazal'
AT5G27220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2 x 10-5 566 204 248 693 73.51% 73.65% 770 941 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.013526'
Avg. expression score for this sample: '222.228'
Avg. expression score in LCM sample: '5.80568'
Tissue used: 'full endosperm'
AT5G27220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.34 x 10-4 415 853 240 440 32.73% 64.71% 1268 680 TAIR8 Avg. embryo expression (dissected): '499.957'
Avg. embryo expression (LCM): '241.1'
AT5G27220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.01203 x 10-1 114 53 68.26% 167 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.5 x 10-5 635 180 77.91% 815 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.7 x 10-17 1251 276 81.93% 1527 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27210 Cand8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 1 3 1 85.71% 25.00% 7 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '19.4653'
Avg. expression score in LCM sample: '4.98259'
Tissue used: 'pure endosperm, no chalazal'
AT5G27210 Cand8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 3 4 8 50.00% 66.67% 6 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '34.2257'
Avg. expression score in LCM sample: '4.98259'
Tissue used: 'full endosperm'
AT5G27210 Cand8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 3 1 1 2 75.00% 66.67% 4 3 TAIR8 Avg. embryo expression (dissected): '25.9255'
Avg. embryo expression (LCM): '29.7764'
AT5G27210 Cand8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.26882 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27210 Cand8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.26882 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27210 Cand8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.75538 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27200 ACP5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 15 24 5 42 38.46% 89.36% 39 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.750948'
Avg. expression score for this sample: '2056.29'
Avg. expression score in LCM sample: '611.242'
Tissue used: 'pure endosperm, no chalazal'
AT5G27200 ACP5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.74077 x 10-1 5 19 22 66 20.83% 75.00% 24 88 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.750948'
Avg. expression score for this sample: '1215.03'
Avg. expression score in LCM sample: '611.242'
Tissue used: 'full endosperm'
AT5G27200 ACP5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.878 x 10-3 62 119 10 12 34.25% 54.55% 181 22 TAIR8 Avg. embryo expression (dissected): '4551.01'
Avg. embryo expression (LCM): '3622.66'
AT5G27200 ACP5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27200 ACP5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.9992 x 10-2 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27200 ACP5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.02323 x 10-1 2 5 28.57% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G27170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27150 NHX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 3 1 3 72.73% 75.00% 11 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '122.735'
Avg. expression score in LCM sample: '63.98'
Tissue used: 'pure endosperm, no chalazal'
AT5G27150 NHX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 5 6 17 54.55% 73.91% 11 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '79.0721'
Avg. expression score in LCM sample: '63.98'
Tissue used: 'full endosperm'
AT5G27150 NHX1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 6.08392 x 10-1 2 5 0 0 28.57% 7 0 TAIR8 Avg. embryo expression (dissected): '74.497'
Avg. embryo expression (LCM): '36.2692'
AT5G27150 NHX1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.71212 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27150 NHX1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27150 NHX1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'