GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G089631	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.03 x 10^-7	54	0	44	0	100.00%	0.00%	54	44	RefGen V2	χ2 p-value for B73 x Mo17: '2.03e-07' χ2 p-value for Mo17 x B73: '6.55e-21' Biased in favor of strain: 'B73'
GRMZM2G089631	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.98 x 10^-20	89	0	85	0	100.00%	0.00%	89	85	RefGen V2	χ2 p-value for B73 x Mo17: '3.95e-21' χ2 p-value for Mo17 x B73: '2.98e-20' Biased in favor of strain: 'B73'
GRMZM2G089630	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.38 x 10^-21	1277	635	1011	625	66.79%	38.20%	1912	1636	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.38e-21' Biased in favor of strain: 'B73'
GRMZM2G089630	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	909	167	527	301	84.48%	36.35%	1076	828	RefGen V2	χ2 p-value for B73 x Mo17: '2.79e-35' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G089619	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	0	2	1	100.00%	33.33%	6	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: ''
GRMZM2G089619	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.26 x 10^-13	503	297	565	301	62.88%	34.76%	800	866	RefGen V2	χ2 p-value for B73 x Mo17: '3.26e-13' χ2 p-value for Mo17 x B73: '2.94e-19' Biased in favor of strain: 'B73'
GRMZM2G089596	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.235181 x 10^-1	216	218	215	266	49.77%	55.30%	434	481	RefGen V2	χ2 p-value for B73 x Mo17: '.9235181' χ2 p-value for Mo17 x B73: '.0200506' Biased in favor of strain: ''
GRMZM2G089596	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.79605 x 10^-2	11	29	14	56	27.50%	80.00%	40	70	RefGen V2	χ2 p-value for B73 x Mo17: '1.48e-07' χ2 p-value for Mo17 x B73: '.0179605' Biased in favor of strain: ''
GRMZM2G089575	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999998 x 10^-1	2	10	7	14	16.67%	66.67%	12	21	RefGen V2	χ2 p-value for B73 x Mo17: '.0002385' χ2 p-value for Mo17 x B73: '.9999998' Biased in favor of strain: ''
GRMZM2G089575	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.30954 x 10^-1	20	14	18	21	58.82%	53.85%	34	39	RefGen V2	χ2 p-value for B73 x Mo17: '.3034837' χ2 p-value for Mo17 x B73: '.630954' Biased in favor of strain: ''
GRMZM2G089567	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.26 x 10^-19	87	0	81	0	100.00%	0.00%	87	81	RefGen V2	χ2 p-value for B73 x Mo17: '1.09e-20' χ2 p-value for Mo17 x B73: '2.26e-19' Biased in favor of strain: 'B73'
GRMZM2G089567	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.54 x 10^-8	64	0	49	0	100.00%	0.00%	64	49	RefGen V2	χ2 p-value for B73 x Mo17: '1.54e-08' χ2 p-value for Mo17 x B73: '4.18e-23' Biased in favor of strain: 'B73'
GRMZM2G089562	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.54 x 10^-9	44	67	150	34	39.64%	18.48%	111	184	RefGen V2	χ2 p-value for B73 x Mo17: '1.54e-09' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G089562	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.33 x 10^-7	286	173	312	144	62.31%	31.58%	459	456	RefGen V2	χ2 p-value for B73 x Mo17: '1.33e-07' χ2 p-value for Mo17 x B73: '3.62e-15' Biased in favor of strain: 'B73'
GRMZM2G089557	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	2	8	6	71.43%	42.86%	7	14	RefGen V2	χ2 p-value for B73 x Mo17: '.2568392' χ2 p-value for Mo17 x B73: '.5929801' Biased in favor of strain: ''
GRMZM2G089557	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.500924 x 10^-1	9	5	4	6	64.29%	60.00%	14	10	RefGen V2	χ2 p-value for B73 x Mo17: '.8500924' χ2 p-value for Mo17 x B73: '.6547207' Biased in favor of strain: ''
GRMZM2G089556	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.75473 x 10^-2	15	17	6	44	46.88%	88.00%	32	50	RefGen V2	χ2 p-value for B73 x Mo17: '.0175473' χ2 p-value for Mo17 x B73: '.0013743' Biased in favor of strain: ''
GRMZM2G089556	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.058592 x 10^-1	98	61	96	87	61.64%	47.54%	159	183	RefGen V2	χ2 p-value for B73 x Mo17: '.0033431' χ2 p-value for Mo17 x B73: '.5058592' Biased in favor of strain: ''
GRMZM2G089549	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.69 x 10^-14	78	4	70	4	95.12%	5.41%	82	74	RefGen V2	χ2 p-value for B73 x Mo17: '3.03e-16' χ2 p-value for Mo17 x B73: '1.69e-14' Biased in favor of strain: 'B73'
GRMZM2G089549	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.36 x 10^-11	103	4	75	1	96.26%	1.32%	107	76	RefGen V2	χ2 p-value for B73 x Mo17: '8.36e-11' χ2 p-value for Mo17 x B73: '1.26e-33' Biased in favor of strain: 'B73'
GRMZM2G089528	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.6 x 10^-17	141	0	136	1	100.00%	0.73%	141	137	RefGen V2	χ2 p-value for B73 x Mo17: '4.60e-17' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G089528	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1016	411	1318	475	71.20%	26.49%	1427	1793	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G089525	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	0		0.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G089525	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G089517	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.610071 x 10^-1	17	6	27	27	73.91%	50.00%	23	54	RefGen V2	χ2 p-value for B73 x Mo17: '.4610071' χ2 p-value for Mo17 x B73: '.0093748' Biased in favor of strain: ''
GRMZM2G089517	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	875	390	872	366	69.17%	29.56%	1265	1238	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G089507	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.57899 x 10^-1	29	21	19	33	58.00%	63.46%	50	52	RefGen V2	χ2 p-value for B73 x Mo17: '.257899' χ2 p-value for Mo17 x B73: '.0522036' Biased in favor of strain: ''
GRMZM2G089507	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.892683 x 10^-1	37	36	20	43	50.68%	68.25%	73	63	RefGen V2	χ2 p-value for B73 x Mo17: '.0037715' χ2 p-value for Mo17 x B73: '.7892683' Biased in favor of strain: ''
GRMZM2G089498	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		11	1	3	4	91.67%	57.14%	12	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0661941' χ2 p-value for Mo17 x B73: '.59298' Biased in favor of strain: ''
GRMZM2G089498	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	4	6	1	69.23%	14.29%	13	7	RefGen V2	χ2 p-value for B73 x Mo17: '.1655179' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: ''
GRMZM2G089491	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.57 x 10^-6	631	803	547	723	44.00%	56.93%	1434	1270	RefGen V2	χ2 p-value for B73 x Mo17: '5.57e-06' χ2 p-value for Mo17 x B73: '7.87e-07' Biased in favor of strain: 'Mo17'
GRMZM2G089491	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.8352 x 10^-3	843	551	542	1249	60.47%	69.74%	1394	1791	RefGen V2	χ2 p-value for B73 x Mo17: '9.33e-07' χ2 p-value for Mo17 x B73: '.0058352' Biased in favor of strain: 'Mo17'
GRMZM2G089484	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.715537 x 10^-1	115	66	65	112	63.54%	63.28%	181	177	RefGen V2	χ2 p-value for B73 x Mo17: '.3715537' χ2 p-value for Mo17 x B73: '.3387238' Biased in favor of strain: ''
GRMZM2G089484	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.6504 x 10^-3	186	134	182	116	58.12%	38.93%	320	298	RefGen V2	χ2 p-value for B73 x Mo17: '.0036504' χ2 p-value for Mo17 x B73: '.0001317' Biased in favor of strain: 'B73'
GRMZM2G089472	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	6	0	8	0.00%	100.00%	6	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G089472	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G089466	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.6437 x 10^-3	580	355	330	831	62.03%	71.58%	935	1161	RefGen V2	χ2 p-value for B73 x Mo17: '.0026437' χ2 p-value for Mo17 x B73: '.0003872' Biased in favor of strain: 'Mo17'
GRMZM2G089466	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.341193 x 10^-1	682	565	582	532	54.69%	47.76%	1247	1114	RefGen V2	χ2 p-value for B73 x Mo17: '.0009222' χ2 p-value for Mo17 x B73: '.1341193' Biased in favor of strain: ''
GRMZM2G089461	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G089461	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	3	0	0	50.00%		6	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G089454	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.43 x 10^-28	450	50	223	148	90.00%	39.89%	500	371	RefGen V2	χ2 p-value for B73 x Mo17: '1.80e-28' χ2 p-value for Mo17 x B73: '7.43e-28' Biased in favor of strain: 'B73'
GRMZM2G089454	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.47 x 10^-16	193	63	179	53	75.39%	22.84%	256	232	RefGen V2	χ2 p-value for B73 x Mo17: '4.47e-16' χ2 p-value for Mo17 x B73: '1.31e-16' Biased in favor of strain: 'B73'
GRMZM2G089448	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.56 x 10^-9	111	40	167	41	73.51%	19.71%	151	208	RefGen V2	χ2 p-value for B73 x Mo17: '7.56e-09' χ2 p-value for Mo17 x B73: '2.40e-18' Biased in favor of strain: 'B73'
GRMZM2G089448	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	0	100.00%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G089425	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.20713 x 10^-2	42	11	25	22	79.25%	46.81%	53	47	RefGen V2	χ2 p-value for B73 x Mo17: '.0520713' χ2 p-value for Mo17 x B73: '.0038772' Biased in favor of strain: ''
GRMZM2G089425	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.185458 x 10^-1	20	7	9	10	74.07%	52.63%	27	19	RefGen V2	χ2 p-value for B73 x Mo17: '.0123546' χ2 p-value for Mo17 x B73: '.8185458' Biased in favor of strain: ''
GRMZM2G089406	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.772635 x 10^-1	1188	982	915	939	54.75%	50.65%	2170	1854	RefGen V2	χ2 p-value for B73 x Mo17: '9.77e-06' χ2 p-value for Mo17 x B73: '.5772635' Biased in favor of strain: ''
GRMZM2G089406	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.27506 x 10^-2	1214	689	817	1489	63.79%	64.57%	1903	2306	RefGen V2	χ2 p-value for B73 x Mo17: '.0078478' χ2 p-value for Mo17 x B73: '.0327506' Biased in favor of strain: ''
GRMZM2G089400	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.14 x 10^-10	1317	466	1087	1217	73.86%	52.82%	1783	2304	RefGen V2	χ2 p-value for B73 x Mo17: '1.14e-10' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G089400	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	924	295	1097	548	75.80%	33.31%	1219	1645	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G089397	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.43 x 10^-6	292	82	205	122	78.07%	37.31%	374	327	RefGen V2	χ2 p-value for B73 x Mo17: '1.81e-27' χ2 p-value for Mo17 x B73: '4.43e-06' Biased in favor of strain: 'B73'
GRMZM2G089397	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.398 x 10^-4	166	36	48	49	82.18%	50.52%	202	97	RefGen V2	χ2 p-value for B73 x Mo17: '2.92e-06' χ2 p-value for Mo17 x B73: '.0007398' Biased in favor of strain: 'B73'
GRMZM2G089365	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.4505 x 10^-3	173	56	120	175	75.55%	59.32%	229	295	RefGen V2	χ2 p-value for B73 x Mo17: '.0043681' χ2 p-value for Mo17 x B73: '.0074505' Biased in favor of strain: 'B73'
GRMZM2G089365	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.989004 x 10^-1	473	439	662	648	51.86%	49.47%	912	1310	RefGen V2	χ2 p-value for B73 x Mo17: '.2602279' χ2 p-value for Mo17 x B73: '.6989004' Biased in favor of strain: ''
GRMZM2G089361	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.11638 x 10^-2	250	323	145	187	43.63%	56.33%	573	332	RefGen V2	χ2 p-value for B73 x Mo17: '.0022913' χ2 p-value for Mo17 x B73: '.0211638' Biased in favor of strain: 'Mo17'
GRMZM2G089361	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.2767 x 10^-3	242	86	132	105	73.78%	44.30%	328	237	RefGen V2	χ2 p-value for B73 x Mo17: '.0062767' χ2 p-value for Mo17 x B73: '2.81e-13' Biased in favor of strain: 'B73'
GRMZM2G089357	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	3		75.00%	0	4	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G089357	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.962534 x 10^-1	8	7	9	6	53.33%	40.00%	15	15	RefGen V2	χ2 p-value for B73 x Mo17: '.7962534' χ2 p-value for Mo17 x B73: '.438578' Biased in favor of strain: ''
GRMZM2G089351	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.7155 x 10^-3	435	362	460	347	54.58%	43.00%	797	807	RefGen V2	χ2 p-value for B73 x Mo17: '.0097155' χ2 p-value for Mo17 x B73: '.0000696' Biased in favor of strain: 'B73'
GRMZM2G089351	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0959 x 10^-1	28	22	9	47	56.00%	83.93%	50	56	RefGen V2	χ2 p-value for B73 x Mo17: '.10959' χ2 p-value for Mo17 x B73: '.0061394' Biased in favor of strain: ''
GRMZM2G089343	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	2	4	100.00%	66.67%	1	6	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM2G089343	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	0	8	0	100.00%	0.00%	7	8	RefGen V2	χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G089317	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.21246 x 10^-2	270	207	243	198	56.60%	44.90%	477	441	RefGen V2	χ2 p-value for B73 x Mo17: '.0039195' χ2 p-value for Mo17 x B73: '.0321246' Biased in favor of strain: 'B73'
GRMZM2G089317	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.3106 x 10^-3	287	107	190	276	72.84%	59.23%	394	466	RefGen V2	χ2 p-value for B73 x Mo17: '.0093106' χ2 p-value for Mo17 x B73: '.0006577' Biased in favor of strain: 'B73'
GRMZM2G089308	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	5.17 x 10^-11	11	38	40	4	22.45%	9.09%	49	44	RefGen V2	χ2 p-value for B73 x Mo17: '5.17e-11' χ2 p-value for Mo17 x B73: '5.42e-16' Biased in favor of strain: ''
GRMZM2G089308	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.451096 x 10^-1	206	185	193	212	52.69%	52.35%	391	405	RefGen V2	χ2 p-value for B73 x Mo17: '.2882286' χ2 p-value for Mo17 x B73: '.3451096' Biased in favor of strain: ''
GRMZM2G089296	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	3	7	0	62.50%	0.00%	8	7	RefGen V2	χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: ''
GRMZM2G089296	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	2	2	100.00%	50.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G089291	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.0582 x 10^-3	119	13	48	58	90.15%	54.72%	132	106	RefGen V2	χ2 p-value for B73 x Mo17: '1.04e-08' χ2 p-value for Mo17 x B73: '.0090582' Biased in favor of strain: 'B73'
GRMZM2G089291	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.082937 x 10^-1	44	29	45	31	60.27%	40.79%	73	76	RefGen V2	χ2 p-value for B73 x Mo17: '.0791538' χ2 p-value for Mo17 x B73: '.1082937' Biased in favor of strain: ''
GRMZM2G089288	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.78069 x 10^-2	1	19	7	18	5.00%	72.00%	20	25	RefGen V2	χ2 p-value for B73 x Mo17: '.000057' χ2 p-value for Mo17 x B73: '.0278069' Biased in favor of strain: 'Mo17'
GRMZM2G089288	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	4	0	3	33.33%	100.00%	6	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0832614' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G089285	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.34 x 10^-7	97	11	55	7	89.81%	11.29%	108	62	RefGen V2	χ2 p-value for B73 x Mo17: '3.34e-07' χ2 p-value for Mo17 x B73: '2.25e-20' Biased in favor of strain: 'B73'
GRMZM2G089285	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.5263 x 10^-3	12	2	17	0	85.71%	0.00%	14	17	RefGen V2	χ2 p-value for B73 x Mo17: '.0075263' χ2 p-value for Mo17 x B73: '.0000374' Biased in favor of strain: 'B73'
GRMZM2G089282	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.34478 x 10^-2	97	75	85	55	56.40%	39.29%	172	140	RefGen V2	χ2 p-value for B73 x Mo17: '.0934478' χ2 p-value for Mo17 x B73: '.0112299' Biased in favor of strain: ''
GRMZM2G089282	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.319976 x 10^-1	41	5	15	20	89.13%	57.14%	46	35	RefGen V2	χ2 p-value for B73 x Mo17: '.0012295' χ2 p-value for Mo17 x B73: '.2319976' Biased in favor of strain: ''
GRMZM2G089259	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G089259	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.9049 x 10^-2	13	4	14	3	76.47%	17.65%	17	17	RefGen V2	χ2 p-value for B73 x Mo17: '.029049' χ2 p-value for Mo17 x B73: '.0076329' Biased in favor of strain: 'B73'
GRMZM2G089248	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.897069 x 10^-1	110	84	105	103	56.70%	49.52%	194	208	RefGen V2	χ2 p-value for B73 x Mo17: '.0619447' χ2 p-value for Mo17 x B73: '.8897069' Biased in favor of strain: ''
GRMZM2G089248	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.463331 x 10^-1	24	14	5	27	63.16%	84.38%	38	32	RefGen V2	χ2 p-value for B73 x Mo17: '.6463331' χ2 p-value for Mo17 x B73: '.0335866' Biased in favor of strain: ''
GRMZM2G089231	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5 x 10^-5	18	44	4	53	29.03%	92.98%	62	57	RefGen V2	χ2 p-value for B73 x Mo17: '3.25e-10' χ2 p-value for Mo17 x B73: '.000025' Biased in favor of strain: 'Mo17'
GRMZM2G089231	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.37 x 10^-10	483	266	469	294	64.49%	38.53%	749	763	RefGen V2	χ2 p-value for B73 x Mo17: '2.21e-15' χ2 p-value for Mo17 x B73: '2.37e-10' Biased in favor of strain: 'B73'
GRMZM2G089218	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.25094 x 10^-2	38	17	11	3	69.09%	21.43%	55	14	RefGen V2	χ2 p-value for B73 x Mo17: '.004631' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: 'B73'
GRMZM2G089218	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G089193	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.32596 x 10^-1	64	43	52	79	59.81%	60.31%	107	131	RefGen V2	χ2 p-value for B73 x Mo17: '.132596' χ2 p-value for Mo17 x B73: '.1224659' Biased in favor of strain: ''
GRMZM2G089193	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.468471 x 10^-1	157	109	112	113	59.02%	50.22%	266	225	RefGen V2	χ2 p-value for B73 x Mo17: '.0032498' χ2 p-value for Mo17 x B73: '.9468471' Biased in favor of strain: ''
GRMZM2G089163	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.592557 x 10^-1	125	101	84	70	55.31%	45.45%	226	154	RefGen V2	χ2 p-value for B73 x Mo17: '.110387' χ2 p-value for Mo17 x B73: '.2592557' Biased in favor of strain: ''
GRMZM2G089163	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.57273 x 10^-1	141	83	72	164	62.95%	69.49%	224	236	RefGen V2	χ2 p-value for B73 x Mo17: '.2375178' χ2 p-value for Mo17 x B73: '.357273' Biased in favor of strain: ''
GRMZM2G089136	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.64859 x 10^-2	203	125	186	227	61.89%	54.96%	328	413	RefGen V2	χ2 p-value for B73 x Mo17: '.0664859' χ2 p-value for Mo17 x B73: '4.53e-07' Biased in favor of strain: ''
GRMZM2G089136	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.39805 x 10^-2	485	429	531	464	53.06%	46.63%	914	995	RefGen V2	χ2 p-value for B73 x Mo17: '.0639805' χ2 p-value for Mo17 x B73: '.0336666' Biased in favor of strain: ''
GRMZM2G089132	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0631 x 10^-3	32	6	18	3	84.21%	14.29%	38	21	RefGen V2	χ2 p-value for B73 x Mo17: '.0000247' χ2 p-value for Mo17 x B73: '.0010631' Biased in favor of strain: 'B73'
GRMZM2G089132	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G089121	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.376598 x 10^-1	91	39	31	52	70.00%	62.65%	130	83	RefGen V2	χ2 p-value for B73 x Mo17: '.4201423' χ2 p-value for Mo17 x B73: '.4376598' Biased in favor of strain: ''
GRMZM2G089121	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.600471 x 10^-1	50	56	79	53	47.17%	40.15%	106	132	RefGen V2	χ2 p-value for B73 x Mo17: '.5600471' χ2 p-value for Mo17 x B73: '.0236351' Biased in favor of strain: ''
GRMZM2G089102	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.58876 x 10^-2	183	145	243	169	55.79%	41.02%	328	412	RefGen V2	χ2 p-value for B73 x Mo17: '.0358876' χ2 p-value for Mo17 x B73: '.0002666' Biased in favor of strain: 'B73'
GRMZM2G089102	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G089092	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.89 x 10^-17	278	33	188	34	89.39%	15.32%	311	222	RefGen V2	χ2 p-value for B73 x Mo17: '1.89e-17' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G089092	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	953	253	811	159	79.02%	16.39%	1206	970	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G089086	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.06 x 10^-7	170	55	137	65	75.56%	32.18%	225	202	RefGen V2	χ2 p-value for B73 x Mo17: '1.77e-14' χ2 p-value for Mo17 x B73: '4.06e-07' Biased in favor of strain: 'B73'
GRMZM2G089086	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	4	4	0	50.00%	0.00%	8	4	RefGen V2	χ2 p-value for B73 x Mo17: '.3173024' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''

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