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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G64500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.715 x 10-3 40 1 97.56% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 43 11 79.63% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.517953'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G64490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.837316'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G64490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.40139'
Avg. embryo expression (LCM): '1.25586'
AT5G64490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '62.3447'
Avg. expression score in LCM sample: '11.7142'
Tissue used: 'pure endosperm, no chalazal'
AT5G64480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '122.808'
Avg. expression score in LCM sample: '11.7142'
Tissue used: 'full endosperm'
AT5G64480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '49.4106'
Avg. embryo expression (LCM): '70.0517'
AT5G64480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64470 TBL12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.47727 x 10-1 13 11 6 34 54.17% 85.00% 24 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.596711'
Avg. expression score for this sample: '66.9662'
Avg. expression score in LCM sample: '32.5559'
Tissue used: 'pure endosperm, no chalazal'
AT5G64470 TBL12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 20 6 16 27 76.92% 62.79% 26 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.596711'
Avg. expression score for this sample: '39.1588'
Avg. expression score in LCM sample: '32.5559'
Tissue used: 'full endosperm'
AT5G64470 TBL12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 17 19 6 9 47.22% 60.00% 36 15 TAIR8 Avg. embryo expression (dissected): '86.6469'
Avg. embryo expression (LCM): '43.4527'
AT5G64470 TBL12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.57155 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64470 TBL12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 46 18 71.88% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64470 TBL12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.98 x 10-4 49 4 92.45% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.63 x 10-4 49 4 92.45% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4731 x 10-2 23 2 92.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.76066 x 10-1 12 7 4 3 63.16% 42.86% 19 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '85.1631'
Avg. expression score in LCM sample: '33.8052'
Tissue used: 'pure endosperm, no chalazal'
AT5G64460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.89294 x 10-1 15 1 8 9 93.75% 52.94% 16 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '130.585'
Avg. expression score in LCM sample: '33.8052'
Tissue used: 'full endosperm'
AT5G64460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.77087 x 10-1 11 16 6 3 40.74% 33.33% 27 9 TAIR8 Avg. embryo expression (dissected): '199.748'
Avg. embryo expression (LCM): '146.734'
AT5G64460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.944436'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G64450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.87134'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G64450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G64450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64440 FAAH endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4 x 10-9 359 2 99.45% 361 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G64440 FAAH endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.51 x 10-4 239 7 97.15% 246 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G64440 FAAH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 1.0 12 12 7 30 50.00% 81.08% 24 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.3e-10'
Avg. expression score for this sample: '15.4802'
Avg. expression score in LCM sample: '12.6549'
Tissue used: 'pure endosperm, no chalazal'
AT5G64440 FAAH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 8.1 x 10-14 49 2 6 133 96.08% 95.68% 51 139 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.3e-10'
Avg. expression score for this sample: '26.7179'
Avg. expression score in LCM sample: '12.6549'
Tissue used: 'full endosperm'
AT5G64440 FAAH embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.51186 x 10-1 5 8 0 6 38.46% 100.00% 13 6 TAIR8 Avg. embryo expression (dissected): '10.4746'
Avg. embryo expression (LCM): '13.0986'
AT5G64440 FAAH endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.29763 x 10-1 40 8 83.33% 48 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G64430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 910 4 99.56% 914 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.9 x 10-25 575 21 96.48% 596 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.2 x 10-5 314 70 98 237 81.77% 70.75% 384 335 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.0e-16'
Avg. expression score for this sample: '141.636'
Avg. expression score in LCM sample: '31.2037'
Tissue used: 'pure endosperm, no chalazal'
AT5G64430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.8 x 10-14 272 50 70 341 84.47% 82.97% 322 411 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.0e-16'
Avg. expression score for this sample: '143.382'
Avg. expression score in LCM sample: '31.2037'
Tissue used: 'full endosperm'
AT5G64430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.14221 x 10-1 46 34 9 17 57.50% 65.38% 80 26 TAIR8 Avg. embryo expression (dissected): '39.5881'
Avg. embryo expression (LCM): '9.99663'
AT5G64430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.957 x 10-3 105 12 89.74% 117 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.45098 x 10-1 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.475 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '55.5638'
Avg. expression score in LCM sample: '37.9941'
Tissue used: 'pure endosperm, no chalazal'
AT5G64420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 2 1 100.00% 33.33% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '86.7247'
Avg. expression score in LCM sample: '37.9941'
Tissue used: 'full endosperm'
AT5G64420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Avg. embryo expression (dissected): '202.483'
Avg. embryo expression (LCM): '277.62'
AT5G64420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64410 OPT4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.3 x 10-29 887 17 98.12% 904 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64410 OPT4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.6 x 10-25 437 2 99.54% 439 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64410 OPT4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.5755 x 10-2 14 3 10 51 82.35% 83.61% 17 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.1e-09'
Avg. expression score for this sample: '29.6857'
Avg. expression score in LCM sample: '.63201'
Tissue used: 'pure endosperm, no chalazal'
AT5G64410 OPT4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.0 x 10-8 95 54 41 329 63.76% 88.92% 149 370 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.1e-09'
Avg. expression score for this sample: '97.5039'
Avg. expression score in LCM sample: '.63201'
Tissue used: 'full endosperm'
AT5G64410 OPT4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.36003 x 10-1 18 28 3 4 39.13% 57.14% 46 7 TAIR8 Avg. embryo expression (dissected): '30.0601'
Avg. embryo expression (LCM): '10.1976'
AT5G64410 OPT4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.76321 x 10-1 81 16 83.51% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64401 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.42857 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64401 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64401 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G64401 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 1 0 50.00% 0.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '26.7992'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G64401 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '9.01618'
Avg. embryo expression (LCM): '0'
AT5G64401 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4809 x 10-2 98 10 90.74% 108 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G64400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.72399 x 10-1 78 23 77.23% 101 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G64400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 1.0 25 11 11 22 69.44% 66.67% 36 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000309'
Avg. expression score for this sample: '118.699'
Avg. expression score in LCM sample: '59.2767'
Tissue used: 'pure endosperm, no chalazal'
AT5G64400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 2.8 x 10-5 63 10 21 110 86.30% 83.97% 73 131 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000309'
Avg. expression score for this sample: '124.166'
Avg. expression score in LCM sample: '59.2767'
Tissue used: 'full endosperm'
AT5G64400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.40642 x 10-1 15 30 3 5 33.33% 62.50% 45 8 TAIR8 Avg. embryo expression (dissected): '138.707'
Avg. embryo expression (LCM): '193.879'
AT5G64400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.08093 x 10-1 45 9 83.33% 54 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G64395 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64395 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.6246'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G64395 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '43.8198'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G64395 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '17.0042'
Avg. embryo expression (LCM): '0'
AT5G64395 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64395 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64390 HEN4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1 x 10-11 151 12 92.64% 163 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64390 HEN4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.90661 x 10-1 36 14 24 47 72.00% 66.20% 50 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '186.537'
Avg. expression score in LCM sample: '139.042'
Tissue used: 'pure endosperm, no chalazal'
AT5G64390 HEN4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.31103 x 10-1 63 30 38 65 67.74% 63.11% 93 103 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '172.441'
Avg. expression score in LCM sample: '139.042'
Tissue used: 'full endosperm'
AT5G64390 HEN4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.90216 x 10-1 37 30 12 19 55.22% 61.29% 67 31 TAIR8 Avg. embryo expression (dissected): '194.723'
Avg. embryo expression (LCM): '99.7402'
AT5G64390 HEN4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.44639 x 10-1 16 6 72.73% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64390 HEN4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.2109 x 10-2 41 10 80.39% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0672 x 10-2 20 0 100.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 4 2 6 63.64% 75.00% 11 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.10401'
Avg. expression score for this sample: '9.24463'
Avg. expression score in LCM sample: '.999458'
Tissue used: 'pure endosperm, no chalazal'
AT5G64380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.13585 x 10-1 20 5 1 14 80.00% 93.33% 25 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.10401'
Avg. expression score for this sample: '20.5158'
Avg. expression score in LCM sample: '.999458'
Tissue used: 'full endosperm'
AT5G64380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.96381 x 10-1 16 35 6 13 31.37% 68.42% 51 19 TAIR8 Avg. embryo expression (dissected): '50.9512'
Avg. embryo expression (LCM): '35.6915'
AT5G64380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.69138 x 10-1 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64370 BETA-UP endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64370 BETA-UP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '276.706'
Avg. expression score in LCM sample: '214.34'
Tissue used: 'pure endosperm, no chalazal'
AT5G64370 BETA-UP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '558.335'
Avg. expression score in LCM sample: '214.34'
Tissue used: 'full endosperm'
AT5G64370 BETA-UP embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '224.242'
Avg. embryo expression (LCM): '140.103'
AT5G64370 BETA-UP endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64370 BETA-UP endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.33333 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64360 EIP9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1040 109 90.51% 1149 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64360 EIP9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.17286 x 10-1 480 144 248 395 76.92% 61.43% 624 643 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.089637'
Avg. expression score for this sample: '373.046'
Avg. expression score in LCM sample: '346.577'
Tissue used: 'pure endosperm, no chalazal'
AT5G64360 EIP9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.4885 x 10-1 798 232 394 559 77.48% 58.66% 1030 953 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.089637'
Avg. expression score for this sample: '379.117'
Avg. expression score in LCM sample: '346.577'
Tissue used: 'full endosperm'
AT5G64360 EIP9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.867 x 10-2 352 235 141 99 59.97% 41.25% 587 240 TAIR8 Avg. embryo expression (dissected): '455.803'
Avg. embryo expression (LCM): '304.784'
AT5G64360 EIP9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 137 63 68.50% 200 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64360 EIP9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.04181 x 10-1 402 168 70.53% 570 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64350 FKBP12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G64350 FKBP12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '789.937'
Avg. expression score in LCM sample: '323.501'
Tissue used: 'pure endosperm, no chalazal'