| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G090328 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 9 | 9 | 0.00% | 50.00% | 3 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.1336143' Biased in favor of strain: '' |
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| GRMZM2G090328 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.51 x 10-18 | 184 | 52 | 316 | 35 | 77.97% | 9.97% | 236 | 351 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.51e-18' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G090300 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.1 x 10-29 | 2451 | 1730 | 2516 | 1720 | 58.62% | 40.60% | 4181 | 4236 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.12e-29' χ2 p-value for Mo17 x B73: '2.14e-34' Biased in favor of strain: 'B73' |
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| GRMZM2G090300 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.071781 x 10-1 | 569 | 266 | 351 | 672 | 68.14% | 65.69% | 835 | 1023 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3653211' χ2 p-value for Mo17 x B73: '.5071781' Biased in favor of strain: '' |
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| GRMZM2G090274 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 1 | 100.00% | 50.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| GRMZM2G090274 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 1 | 3 | 0.00% | 75.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G090266 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 1 | 0.00% | 100.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G090266 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G090262 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.7661 x 10-3 | 118 | 36 | 91 | 103 | 76.62% | 53.09% | 154 | 194 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0087661' χ2 p-value for Mo17 x B73: '.0000606' Biased in favor of strain: 'B73' |
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| GRMZM2G090262 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.78 x 10-5 | 138 | 46 | 115 | 62 | 75.00% | 35.03% | 184 | 177 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.18e-11' χ2 p-value for Mo17 x B73: '.0000678' Biased in favor of strain: 'B73' |
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| GRMZM2G090230 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 3 | 7 | 0 | 66.67% | 0.00% | 9 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: '' |
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| GRMZM2G090230 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.48412 x 10-2 | 27 | 6 | 10 | 6 | 81.82% | 37.50% | 33 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0648412' χ2 p-value for Mo17 x B73: '.0133283' Biased in favor of strain: '' |
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| GRMZM2G090226 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G090226 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.065649 x 10-1 | 130 | 124 | 225 | 155 | 51.18% | 40.79% | 254 | 380 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7065649' χ2 p-value for Mo17 x B73: '.0003295' Biased in favor of strain: '' |
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| GRMZM2G090217 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3 x 10-8 | 202 | 46 | 145 | 63 | 81.45% | 30.29% | 248 | 208 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.92e-23' χ2 p-value for Mo17 x B73: '1.30e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G090217 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.98 x 10-9 | 109 | 10 | 89 | 62 | 91.60% | 41.06% | 119 | 151 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.98e-09' χ2 p-value for Mo17 x B73: '2.47e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G090213 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.98327 x 10-2 | 75 | 74 | 47 | 133 | 50.34% | 73.89% | 149 | 180 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000235' χ2 p-value for Mo17 x B73: '.0398327' Biased in favor of strain: '' |
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| GRMZM2G090213 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.552185 x 10-1 | 89 | 109 | 93 | 137 | 44.95% | 59.57% | 198 | 230 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1552185' χ2 p-value for Mo17 x B73: '.0037165' Biased in favor of strain: '' |
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| GRMZM2G090190 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.96 x 10-6 | 266 | 167 | 240 | 130 | 61.43% | 35.14% | 433 | 370 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.96e-06' χ2 p-value for Mo17 x B73: '1.07e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G090190 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.167 x 10-4 | 139 | 35 | 130 | 68 | 79.89% | 34.34% | 174 | 198 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002167' χ2 p-value for Mo17 x B73: '4.99e-22' Biased in favor of strain: 'B73' |
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| GRMZM2G090177 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.44492 x 10-1 | 34 | 18 | 61 | 72 | 65.38% | 54.14% | 52 | 133 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.844492' χ2 p-value for Mo17 x B73: '.0021716' Biased in favor of strain: '' |
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| GRMZM2G090177 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.413007 x 10-1 | 40 | 30 | 36 | 31 | 57.14% | 46.27% | 70 | 67 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2319977' χ2 p-value for Mo17 x B73: '.5413007' Biased in favor of strain: '' |
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| GRMZM2G090172 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.42 x 10-13 | 164 | 33 | 148 | 46 | 83.25% | 23.71% | 197 | 194 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.03e-20' χ2 p-value for Mo17 x B73: '2.42e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G090172 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.45 x 10-6 | 190 | 43 | 273 | 66 | 81.55% | 19.47% | 233 | 339 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.45e-06' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G090168 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G090168 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 7 | 1 | 75.00% | 12.50% | 4 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: '' |
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| GRMZM2G090156 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.94941 x 10-2 | 1511 | 1203 | 1192 | 1098 | 55.67% | 47.95% | 2714 | 2290 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.38e-09' χ2 p-value for Mo17 x B73: '.0494941' Biased in favor of strain: 'B73' |
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| GRMZM2G090156 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.41 x 10-8 | 1839 | 599 | 855 | 1349 | 75.43% | 61.21% | 2438 | 2204 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.33e-20' χ2 p-value for Mo17 x B73: '5.41e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G090152 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 9 | 6 | 100.00% | 40.00% | 5 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.0284597' Biased in favor of strain: '' |
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| GRMZM2G090152 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.226781 x 10-1 | 19 | 26 | 31 | 25 | 42.22% | 44.64% | 45 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2967175' χ2 p-value for Mo17 x B73: '.4226781' Biased in favor of strain: '' |
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| GRMZM2G090149 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 2 | 0 | 100.00% | 0.00% | 8 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G090149 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 0 | 0 | 100.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G090124 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1358 | 270 | 774 | 640 | 83.42% | 45.26% | 1628 | 1414 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G090124 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.18 x 10-10 | 425 | 193 | 399 | 240 | 68.77% | 37.56% | 618 | 639 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.03e-20' χ2 p-value for Mo17 x B73: '3.18e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G090112 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 2 | 3 | 66.67% | 60.00% | 3 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM2G090112 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G090105 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.4969 x 10-3 | 29 | 0 | 10 | 4 | 100.00% | 28.57% | 29 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001402' χ2 p-value for Mo17 x B73: '.0024969' Biased in favor of strain: 'B73' |
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| GRMZM2G090105 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.49 x 10-17 | 87 | 6 | 210 | 15 | 93.55% | 6.67% | 93 | 225 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.49e-17' χ2 p-value for Mo17 x B73: '1.22e-38' Biased in favor of strain: 'B73' |
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| GRMZM2G090104 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.473896 x 10-1 | 14 | 21 | 14 | 13 | 40.00% | 48.15% | 35 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2367236' χ2 p-value for Mo17 x B73: '.8473896' Biased in favor of strain: '' |
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| GRMZM2G090104 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.327677 x 10-1 | 8 | 2 | 3 | 10 | 80.00% | 76.92% | 10 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3710998' χ2 p-value for Mo17 x B73: '.4327677' Biased in favor of strain: '' |
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| GRMZM2G090100 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 2.73 x 10-7 | 172 | 181 | 164 | 191 | 48.73% | 53.80% | 353 | 355 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.62e-13' χ2 p-value for Mo17 x B73: '2.73e-07' Biased in favor of strain: '' |
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| GRMZM2G090100 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.8281 x 10-1 | 289 | 182 | 167 | 162 | 61.36% | 49.24% | 471 | 329 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.21e-07' χ2 p-value for Mo17 x B73: '.78281' Biased in favor of strain: '' |
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| GRMZM2G090087 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.67 x 10-5 | 2 | 23 | 2 | 27 | 8.00% | 93.10% | 25 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000267' χ2 p-value for Mo17 x B73: '3.44e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G090087 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.911726 x 10-1 | 0 | 20 | 4 | 13 | 0.00% | 76.47% | 20 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.54e-10' χ2 p-value for Mo17 x B73: '.3911726' Biased in favor of strain: '' |
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| GRMZM2G090086 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 59 | 1 | 0 | 2 | 98.33% | 100.00% | 60 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.96e-07' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G090086 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 16 | 0 | 3 | 0 | 100.00% | 0.00% | 16 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G090070 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.619348 x 10-1 | 162 | 146 | 133 | 149 | 52.60% | 52.84% | 308 | 282 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3619348' χ2 p-value for Mo17 x B73: '.3406985' Biased in favor of strain: '' |
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| GRMZM2G090070 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.041218 x 10-1 | 88 | 42 | 68 | 122 | 67.69% | 64.21% | 130 | 190 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8041218' χ2 p-value for Mo17 x B73: '.4726429' Biased in favor of strain: '' |
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| GRMZM2G090061 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.728382 x 10-1 | 31 | 20 | 22 | 14 | 60.78% | 38.89% | 51 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3728382' χ2 p-value for Mo17 x B73: '.000407' Biased in favor of strain: '' |
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| GRMZM2G090061 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.373519 x 10-1 | 84 | 78 | 90 | 37 | 51.85% | 29.13% | 162 | 127 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6373519' χ2 p-value for Mo17 x B73: '2.56e-06' Biased in favor of strain: '' |
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| GRMZM2G090051 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.05 x 10-15 | 88 | 9 | 139 | 19 | 90.72% | 12.03% | 97 | 158 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.05e-15' χ2 p-value for Mo17 x B73: '1.34e-21' Biased in favor of strain: 'B73' |
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| GRMZM2G090051 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G090029 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 8 | 3 | 9 | 0.00% | 75.00% | 8 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.5402915' Biased in favor of strain: '' |
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| GRMZM2G090029 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.059032 x 10-1 | 7 | 3 | 11 | 3 | 70.00% | 21.43% | 10 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: '' |
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| GRMZM2G090028 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 20 | 377 | 8 | 411 | 5.04% | 98.09% | 397 | 419 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17' |
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| GRMZM2G090028 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 x 10-25 | 2 | 98 | 5 | 244 | 2.00% | 97.99% | 100 | 249 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.00e-25' Biased in favor of strain: 'Mo17' |
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| GRMZM2G090020 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.635524 x 10-1 | 11 | 0 | 5 | 5 | 100.00% | 50.00% | 11 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0190169' χ2 p-value for Mo17 x B73: '.2635524' Biased in favor of strain: '' |
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| GRMZM2G090020 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 6 | 0 | 2 | 60.00% | 100.00% | 15 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.438578' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G090018 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.618044 x 10-1 | 16 | 17 | 14 | 11 | 48.48% | 44.00% | 33 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8618044' χ2 p-value for Mo17 x B73: '.5485063' Biased in favor of strain: '' |
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| GRMZM2G090018 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 5 | 0 | 6 | 37.50% | 100.00% | 8 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.080115' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G090010 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.698155 x 10-1 | 31 | 18 | 3 | 8 | 63.27% | 72.73% | 49 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6134808' χ2 p-value for Mo17 x B73: '.6698155' Biased in favor of strain: '' |
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| GRMZM2G090010 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.12 x 10-5 | 61 | 131 | 74 | 133 | 31.77% | 64.25% | 192 | 207 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.38e-07' χ2 p-value for Mo17 x B73: '.0000412' Biased in favor of strain: 'Mo17' |
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| GRMZM2G089982 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.24 x 10-6 | 63 | 12 | 68 | 22 | 84.00% | 24.44% | 75 | 90 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.89e-09' χ2 p-value for Mo17 x B73: '1.24e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G089982 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.58 x 10-8 | 79 | 4 | 21 | 3 | 95.18% | 12.50% | 83 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.58e-08' χ2 p-value for Mo17 x B73: '1.81e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G089976 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.062571 x 10-1 | 880 | 373 | 403 | 794 | 70.23% | 66.33% | 1253 | 1197 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0074366' χ2 p-value for Mo17 x B73: '.8062571' Biased in favor of strain: '' |
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| GRMZM2G089976 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.030777 x 10-1 | 319 | 206 | 248 | 213 | 60.76% | 46.20% | 525 | 461 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.15e-07' χ2 p-value for Mo17 x B73: '.1030777' Biased in favor of strain: '' |
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| GRMZM2G089974 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.4 x 10-9 | 256 | 111 | 220 | 110 | 69.75% | 33.33% | 367 | 330 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.76e-14' χ2 p-value for Mo17 x B73: '1.40e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G089974 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.77333 x 10-1 | 68 | 32 | 39 | 54 | 68.00% | 58.06% | 100 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.777333' χ2 p-value for Mo17 x B73: '.0784475' Biased in favor of strain: '' |
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| GRMZM2G089962 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.27 x 10-26 | 790 | 162 | 622 | 263 | 82.98% | 29.72% | 952 | 885 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.27e-26' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G089962 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.36 x 10-27 | 401 | 120 | 327 | 103 | 76.97% | 23.95% | 521 | 430 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.92e-35' χ2 p-value for Mo17 x B73: '3.36e-27' Biased in favor of strain: 'B73' |
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| GRMZM2G089959 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.43531 x 10-2 | 117 | 85 | 119 | 84 | 57.92% | 41.38% | 202 | 203 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0243531' χ2 p-value for Mo17 x B73: '.0140291' Biased in favor of strain: 'B73' |
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| GRMZM2G089959 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.75821 x 10-2 | 51 | 15 | 38 | 36 | 77.27% | 48.65% | 66 | 74 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0675821' χ2 p-value for Mo17 x B73: '.0010091' Biased in favor of strain: '' |
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| GRMZM2G089949 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 646 | 49 | 308 | 99 | 92.95% | 24.32% | 695 | 407 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G089949 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.48 x 10-9 | 159 | 28 | 117 | 41 | 85.03% | 25.95% | 187 | 158 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.74e-22' χ2 p-value for Mo17 x B73: '1.48e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G089944 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.22 x 10-7 | 219 | 99 | 201 | 108 | 68.87% | 34.95% | 318 | 309 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.71e-11' χ2 p-value for Mo17 x B73: '1.22e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G089944 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 6.0391 x 10-3 | 4 | 9 | 19 | 2 | 30.77% | 9.52% | 13 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0060391' χ2 p-value for Mo17 x B73: '2.78e-08' Biased in favor of strain: '' |
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| GRMZM2G089895 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.086678 x 10-1 | 19 | 12 | 37 | 20 | 61.29% | 35.09% | 31 | 57 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2086678' χ2 p-value for Mo17 x B73: '.0243409' Biased in favor of strain: '' |
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| GRMZM2G089895 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | maternally biased | 2.6998 x 10-3 | 45 | 7 | 0 | 18 | 86.54% | 100.00% | 52 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0023675' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| GRMZM2G089854 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.54127 x 10-1 | 237 | 100 | 145 | 215 | 70.33% | 59.72% | 337 | 360 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.154127' χ2 p-value for Mo17 x B73: '.0051886' Biased in favor of strain: '' |
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| GRMZM2G089854 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.86 x 10-5 | 168 | 64 | 166 | 99 | 72.41% | 37.36% | 232 | 265 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.61e-12' χ2 p-value for Mo17 x B73: '.0000386' Biased in favor of strain: 'B73' |
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| GRMZM2G089767 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1336 | 560 | 1181 | 493 | 70.46% | 29.45% | 1896 | 1674 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G089767 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 169 | 423 | 89 | 640 | 28.55% | 87.79% | 592 | 729 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.06e-33' Biased in favor of strain: 'Mo17' |
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| GRMZM2G089743 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G089743 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 0 | 100.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G089736 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.01 x 10-7 | 277 | 135 | 235 | 135 | 67.23% | 36.49% | 412 | 370 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.64e-12' χ2 p-value for Mo17 x B73: '2.01e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G089736 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.5 x 10-11 | 288 | 57 | 204 | 122 | 83.48% | 37.42% | 345 | 326 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.50e-11' χ2 p-value for Mo17 x B73: '4.05e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G089720 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G089720 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6998 x 10-3 | 14 | 35 | 6 | 26 | 28.57% | 81.25% | 49 | 32 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.000407' Biased in favor of strain: 'Mo17' |
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| GRMZM2G089713 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 13675 | 5746 | 5139 | 7514 | 70.41% | 59.39% | 19421 | 12653 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G089713 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 236567 | 98529 | 129354 | 216545 | 70.60% | 62.60% | 335096 | 345899 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G089696 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.992876 x 10-1 | 41 | 16 | 26 | 21 | 71.93% | 44.68% | 57 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3992876' χ2 p-value for Mo17 x B73: '.0013867' Biased in favor of strain: '' |
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| GRMZM2G089696 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.802796 x 10-1 | 52 | 38 | 28 | 25 | 57.78% | 47.17% | 90 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1400165' χ2 p-value for Mo17 x B73: '.6802796' Biased in favor of strain: '' |
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| GRMZM2G089676 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.487 x 10-3 | 127 | 72 | 76 | 44 | 63.82% | 36.67% | 199 | 120 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000967' χ2 p-value for Mo17 x B73: '.003487' Biased in favor of strain: 'B73' |
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| GRMZM2G089676 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.26666 x 10-2 | 80 | 20 | 47 | 65 | 80.00% | 58.04% | 100 | 112 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046783' χ2 p-value for Mo17 x B73: '.0526666' Biased in favor of strain: '' |
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| GRMZM2G089673 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 2 | 10 | 100.00% | 83.33% | 3 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM2G089673 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 0 | 100.00% | 0.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G089655 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.85 x 10-26 | 146 | 11 | 190 | 32 | 92.99% | 14.41% | 157 | 222 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.56e-27' χ2 p-value for Mo17 x B73: '2.85e-26' Biased in favor of strain: 'B73' |
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| GRMZM2G089655 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.05 x 10-15 | 148 | 5 | 113 | 11 | 96.73% | 8.87% | 153 | 124 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.05e-15' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G089636 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 4 | 1 | 20.00% | 0 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G089636 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 3 | 0 | 100.00% | 0.00% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |