Displaying data sets 22601 - 22700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G27960 AGL90 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27960 AGL90 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 15 4 78.95% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.14305 x 10-1 45 7 86.54% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 6 3 9 45.45% 75.00% 11 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002614'
Avg. expression score for this sample: '12.0406'
Avg. expression score in LCM sample: '2.38106'
Tissue used: 'pure endosperm, no chalazal'
AT5G27950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.81 x 10-4 55 11 14 74 83.33% 84.09% 66 88 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002614'
Avg. expression score for this sample: '37.1371'
Avg. expression score in LCM sample: '2.38106'
Tissue used: 'full endosperm'
AT5G27950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 3 4 2 62.50% 33.33% 8 6 TAIR8 Avg. embryo expression (dissected): '19.4616'
Avg. embryo expression (LCM): '16.2634'
AT5G27950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.54187 x 10-1 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.81 x 10-4 59 1 98.33% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27945 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27945 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '1.14644'
Tissue used: 'pure endosperm, no chalazal'
AT5G27945 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '1.14644'
Tissue used: 'full endosperm'
AT5G27945 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G27945 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27945 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27944 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27944 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27944 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27944 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G27944 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27944 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27940 WPP3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27940 WPP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.96732'
Avg. expression score in LCM sample: '8.90694'
Tissue used: 'pure endosperm, no chalazal'
AT5G27940 WPP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.801491'
Avg. expression score in LCM sample: '8.90694'
Tissue used: 'full endosperm'
AT5G27940 WPP3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '1.9089'
AT5G27940 WPP3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27940 WPP3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.71343 x 10-1 86 4 95.56% 90 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.44444 x 10-1 3 0 0 2 100.00% 100.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001823'
Avg. expression score for this sample: '2.50049'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.758 x 10-3 20 0 0 3 100.00% 100.00% 20 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001823'
Avg. expression score for this sample: '6.94908'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 3 0 1 25.00% 100.00% 4 1 TAIR8 Avg. embryo expression (dissected): '3.18801'
Avg. embryo expression (LCM): '3.75501'
AT5G27930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 27 0 100.00% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27920 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.2 x 10-5 570 92 86.10% 662 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.3862 x 10-2 170 77 57 209 68.83% 78.57% 247 266 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-10'
Avg. expression score for this sample: '56.5935'
Avg. expression score in LCM sample: '16.2559'
Tissue used: 'pure endosperm, no chalazal'
AT5G27920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.3 x 10-10 211 54 69 344 79.62% 83.29% 265 413 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-10'
Avg. expression score for this sample: '69.3385'
Avg. expression score in LCM sample: '16.2559'
Tissue used: 'full endosperm'
AT5G27920 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.73283 x 10-1 125 169 40 71 42.52% 63.96% 294 111 TAIR8 Avg. embryo expression (dissected): '73.1409'
Avg. embryo expression (LCM): '18.6997'
AT5G27920 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.26 x 10-4 78 5 93.98% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27920 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.8 x 10-11 266 17 93.99% 283 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27910 NF-YC8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.739 x 10-3 51 63 44.74% 114 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27910 NF-YC8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.35117 x 10-1 5 2 0 4 71.43% 100.00% 7 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.64472'
Avg. expression score for this sample: '5.48711'
Avg. expression score in LCM sample: '18.2695'
Tissue used: 'pure endosperm, no chalazal'
AT5G27910 NF-YC8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.64472'
Avg. expression score for this sample: '.915072'
Avg. expression score in LCM sample: '18.2695'
Tissue used: 'full endosperm'
AT5G27910 NF-YC8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 3 0 0 0 100.00% 3 0 TAIR8 Avg. embryo expression (dissected): '2.06268'
Avg. embryo expression (LCM): '0'
AT5G27910 NF-YC8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27910 NF-YC8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.75646 x 10-1 221 18 92.47% 239 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27890 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.12249 x 10-1 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 0 3 0 100.00% 0.00% 8 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.54657'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 0 5 1 100.00% 16.67% 5 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.97686'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27890 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 3.2508 x 10-2 10 0 0 0 100.00% 10 0 TAIR8 Avg. embryo expression (dissected): '4.97408'
Avg. embryo expression (LCM): '0'
AT5G27890 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.1739 x 10-2 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27890 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.91 x 10-4 0 13 0.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27889 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27889 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.77791'
Avg. expression score in LCM sample: '9.12741'
Tissue used: 'pure endosperm, no chalazal'
AT5G27889 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '9.12741'
Tissue used: 'full endosperm'
AT5G27889 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.60648'
Avg. embryo expression (LCM): '0'
AT5G27889 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27889 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27880 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 295 80 78.67% 375 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.58054'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.347274'
Avg. embryo expression (LCM): '0'
AT5G27880 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.98361 x 10-1 32 27 54.24% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.14531'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.57796'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.3719'
Avg. embryo expression (LCM): '0'
AT5G27870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27860 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '96.9059'
Avg. expression score in LCM sample: '35.1721'
Tissue used: 'pure endosperm, no chalazal'
AT5G27860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '141.474'
Avg. expression score in LCM sample: '35.1721'
Tissue used: 'full endosperm'
AT5G27860 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '55.2505'
Avg. embryo expression (LCM): '61.6877'
AT5G27860 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27860 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.6 x 10-9 1204 402 74.97% 1606 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.77795 x 10-1 541 493 304 921 52.32% 75.18% 1034 1225 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.365129'
Avg. expression score for this sample: '1405.76'
Avg. expression score in LCM sample: '517.866'
Tissue used: 'pure endosperm, no chalazal'
AT5G27850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.269 x 10-2 732 487 616 1746 60.05% 73.92% 1219 2362 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.365129'
Avg. expression score for this sample: '1846.94'
Avg. expression score in LCM sample: '517.866'
Tissue used: 'full endosperm'
AT5G27850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 x 10-30 1348 2543 204 326 34.64% 61.51% 3891 530 TAIR8 Avg. embryo expression (dissected): '3645.95'
Avg. embryo expression (LCM): '6088.84'
AT5G27850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.88 x 10-4 485 168 74.27% 653 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1576 330 82.69% 1906 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27840 TOPP8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.092 x 10-3 110 14 88.71% 124 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27840 TOPP8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.14947 x 10-1 13 6 9 12 68.42% 57.14% 19 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.233441'
Avg. expression score for this sample: '74.0148'
Avg. expression score in LCM sample: '69.1831'
Tissue used: 'pure endosperm, no chalazal'
AT5G27840 TOPP8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.25338 x 10-1 48 13 17 49 78.69% 74.24% 61 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.233441'
Avg. expression score for this sample: '100.063'
Avg. expression score in LCM sample: '69.1831'
Tissue used: 'full endosperm'
AT5G27840 TOPP8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.13605 x 10-1 12 13 3 7 48.00% 70.00% 25 10 TAIR8 Avg. embryo expression (dissected): '78.8629'
Avg. embryo expression (LCM): '71.2574'
AT5G27840 TOPP8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 10 4 71.43% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27840 TOPP8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 80 29 73.39% 109 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.777 x 10-3 30 2 93.75% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.43958 x 10-1 23 13 13 34 63.89% 72.34% 36 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.294054'
Avg. expression score for this sample: '34.3364'
Avg. expression score in LCM sample: '17.2407'
Tissue used: 'pure endosperm, no chalazal'
AT5G27830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.50066 x 10-1 30 11 11 35 73.17% 76.09% 41 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.294054'
Avg. expression score for this sample: '62.3265'
Avg. expression score in LCM sample: '17.2407'
Tissue used: 'full endosperm'
AT5G27830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.70916 x 10-1 7 12 3 3 36.84% 50.00% 19 6 TAIR8 Avg. embryo expression (dissected): '19.0338'
Avg. embryo expression (LCM): '32.8658'
AT5G27830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 10 3 76.92% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.90678 x 10-1 16 3 84.21% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.6185'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '19.7429'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '29.0509'
Avg. embryo expression (LCM): '40.8279'
AT5G27820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 4 100.00% 0 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.1'
Avg. expression score for this sample: '2.90256'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'