Displaying data sets 22501 - 22600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G28150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.0 x 10-7 112 13 89.60% 125 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.46071 x 10-1 98 34 74.24% 132 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.56527 x 10-1 52 30 34 37 63.41% 52.11% 82 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '89.5955'
Avg. expression score in LCM sample: '43.5499'
Tissue used: 'pure endosperm, no chalazal'
AT5G28150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.15309 x 10-1 56 18 23 69 75.68% 75.00% 74 92 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '75.9279'
Avg. expression score in LCM sample: '43.5499'
Tissue used: 'full endosperm'
AT5G28150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.99187 x 10-1 54 43 10 8 55.67% 44.44% 97 18 TAIR8 Avg. embryo expression (dissected): '102.357'
Avg. embryo expression (LCM): '92.6069'
AT5G28150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.6186 x 10-2 28 4 87.50% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G28090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.292291'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G28090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G28090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.42857 x 10-1 0 6 0.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28080 WNK9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28080 WNK9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.166667'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G28080 WNK9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.66667 x 10-1 0 4 1 0 0.00% 0.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.166667'
Avg. expression score for this sample: '.32979'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G28080 WNK9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.180998'
Avg. embryo expression (LCM): '0'
AT5G28080 WNK9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28080 WNK9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.831 x 10-3 16 5 76.19% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G28070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G28070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G28070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.3 x 10-29 445 414 51.80% 859 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 295 213 99 326 58.07% 76.71% 508 425 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.3e-06'
Avg. expression score for this sample: '301.831'
Avg. expression score in LCM sample: '78.4869'
Tissue used: 'pure endosperm, no chalazal'
AT5G28060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.8 x 10-11 298 151 150 756 66.37% 83.44% 449 906 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.3e-06'
Avg. expression score for this sample: '309.747'
Avg. expression score in LCM sample: '78.4869'
Tissue used: 'full endosperm'
AT5G28060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.9 x 10-6 690 1008 93 130 40.64% 58.30% 1698 223 TAIR8 Avg. embryo expression (dissected): '773.719'
Avg. embryo expression (LCM): '1111.66'
AT5G28060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.84894 x 10-1 127 54 70.17% 181 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1561 169 90.23% 1730 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28052 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28052 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G28052 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G28052 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G28052 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28052 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.9 x 10-11 225 8 96.57% 233 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.84474 x 10-1 87 28 29 53 75.65% 64.63% 115 82 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-09'
Avg. expression score for this sample: '83.2773'
Avg. expression score in LCM sample: '56.4841'
Tissue used: 'pure endosperm, no chalazal'
AT5G28050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.5 x 10-11 237 36 55 234 86.81% 80.97% 273 289 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-09'
Avg. expression score for this sample: '134.195'
Avg. expression score in LCM sample: '56.4841'
Tissue used: 'full endosperm'
AT5G28050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.94344 x 10-1 106 74 46 28 58.89% 37.84% 180 74 TAIR8 Avg. embryo expression (dissected): '162.532'
Avg. embryo expression (LCM): '129.466'
AT5G28050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.44071 x 10-1 57 16 78.08% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1 x 10-7 140 5 96.55% 145 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 21348 1431 93.72% 22779 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.5 x 10-12 8983 1567 4141 4308 85.15% 50.99% 10550 8449 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2555.49'
Avg. expression score in LCM sample: '1128.65'
Tissue used: 'pure endosperm, no chalazal'
AT5G28040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 10260 1745 3342 8653 85.46% 72.14% 12005 11995 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2040.5'
Avg. expression score in LCM sample: '1128.65'
Tissue used: 'full endosperm'
AT5G28040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.9 x 10-26 3631 1887 1299 871 65.80% 40.14% 5518 2170 TAIR8 Avg. embryo expression (dissected): '1590.12'
Avg. embryo expression (LCM): '688.11'
AT5G28040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.3277 x 10-2 1916 590 76.46% 2506 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9 x 10-7 10828 4061 72.72% 14889 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28030 DES1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28030 DES1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.641238'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G28030 DES1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.577207'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G28030 DES1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G28030 DES1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28030 DES1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28020 CYSD2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.69 x 10-4 39 2 95.12% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28020 CYSD2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.51317 x 10-1 12 4 5 0 75.00% 0.00% 16 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.34739'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G28020 CYSD2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 9 1 2 0 90.00% 0.00% 10 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.76589'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G28020 CYSD2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.59709 x 10-1 27 25 8 3 51.92% 27.27% 52 11 TAIR8 Avg. embryo expression (dissected): '26.5864'
Avg. embryo expression (LCM): '19.5663'
AT5G28020 CYSD2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.7557 x 10-2 0 4 0.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28020 CYSD2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.36134 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6 x 10-6 25 0 100.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.3577 x 10-2 14 31 3 19 31.11% 86.36% 45 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.073569'
Avg. expression score for this sample: '33.059'
Avg. expression score in LCM sample: '47.1215'
Tissue used: 'pure endosperm, no chalazal'
AT5G28010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 3 7 11 66.67% 61.11% 9 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.073569'
Avg. expression score for this sample: '8.28712'
Avg. expression score in LCM sample: '47.1215'
Tissue used: 'full endosperm'
AT5G28010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '1.16361'
Avg. embryo expression (LCM): '0'
AT5G28010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.73684 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3 x 10-6 728 632 53.53% 1360 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.714 x 10-3 169 234 139 410 41.94% 74.68% 403 549 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000711'
Avg. expression score for this sample: '325.207'
Avg. expression score in LCM sample: '152.05'
Tissue used: 'pure endosperm, no chalazal'
AT5G28000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1549 x 10-2 265 218 227 471 54.87% 67.48% 483 698 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000711'
Avg. expression score for this sample: '299.041'
Avg. expression score in LCM sample: '152.05'
Tissue used: 'full endosperm'
AT5G28000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.05267 x 10-1 2 7 6 3 22.22% 33.33% 9 9 TAIR8 Avg. embryo expression (dissected): '15.6134'
Avg. embryo expression (LCM): '0'
AT5G28000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.58673 x 10-1 32 12 72.73% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G28000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 2956 290 91.07% 3246 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27990 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 846 109 88.59% 955 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.3975 x 10-1 727 216 307 327 77.09% 51.58% 943 634 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003866'
Avg. expression score for this sample: '422.508'
Avg. expression score in LCM sample: '55.0731'
Tissue used: 'pure endosperm, no chalazal'
AT5G27990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.1 x 10-5 718 171 312 572 80.76% 64.71% 889 884 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003866'
Avg. expression score for this sample: '289.122'
Avg. expression score in LCM sample: '55.0731'
Tissue used: 'full endosperm'
AT5G27990 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.8 x 10-5 979 655 181 118 59.91% 39.46% 1634 299 TAIR8 Avg. embryo expression (dissected): '686.96'
Avg. embryo expression (LCM): '557.337'
AT5G27990 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.5566 x 10-2 148 82 64.35% 230 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27990 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.04927 x 10-1 580 257 69.30% 837 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.89615'
Avg. expression score in LCM sample: '7.99567'
Tissue used: 'pure endosperm, no chalazal'
AT5G27980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 0 0 66.67% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.67022'
Avg. expression score in LCM sample: '7.99567'
Tissue used: 'full endosperm'
AT5G27980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '21.8061'
Avg. embryo expression (LCM): '1.70797'
AT5G27980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.93 x 10-4 64 4 94.12% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.93959 x 10-1 20 11 6 24 64.52% 80.00% 31 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.162261'
Avg. expression score for this sample: '20.2704'
Avg. expression score in LCM sample: '23.1051'
Tissue used: 'pure endosperm, no chalazal'
AT5G27970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.41863 x 10-1 25 10 11 42 71.43% 79.25% 35 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.162261'
Avg. expression score for this sample: '24.9786'
Avg. expression score in LCM sample: '23.1051'
Tissue used: 'full endosperm'
AT5G27970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 15 17 6 7 46.88% 53.85% 32 13 TAIR8 Avg. embryo expression (dissected): '25.4418'
Avg. embryo expression (LCM): '24.6776'
AT5G27970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.156 x 10-3 42 3 93.33% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27967 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27967 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27967 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.14472'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27967 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G27967 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27967 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27960 AGL90 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 379 13 96.68% 392 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G27960 AGL90 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G27960 AGL90 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G27960 AGL90 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'