GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G095090	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.4264 x 10^-2	31	12	19	8	72.09%	29.63%	43	27	RefGen V2	χ2 p-value for B73 x Mo17: '.0037618' χ2 p-value for Mo17 x B73: '.034264' Biased in favor of strain: 'B73'
GRMZM2G095090	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.8629 x 10^-3	24	1	16	9	96.00%	36.00%	25	25	RefGen V2	χ2 p-value for B73 x Mo17: '.0018629' χ2 p-value for Mo17 x B73: '.0011432' Biased in favor of strain: 'B73'
GRMZM2G095084	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.010493 x 10^-1	57	22	27	37	72.15%	57.81%	79	64	RefGen V2	χ2 p-value for B73 x Mo17: '.3010493' χ2 p-value for Mo17 x B73: '.1329416' Biased in favor of strain: ''
GRMZM2G095084	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.691714 x 10^-1	36	17	18	13	67.92%	41.94%	53	31	RefGen V2	χ2 p-value for B73 x Mo17: '.0090582' χ2 p-value for Mo17 x B73: '.3691714' Biased in favor of strain: ''
GRMZM2G095082	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.24 x 10^-18	398	172	458	231	69.82%	33.53%	570	689	RefGen V2	χ2 p-value for B73 x Mo17: '2.90e-21' χ2 p-value for Mo17 x B73: '5.24e-18' Biased in favor of strain: 'B73'
GRMZM2G095082	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.78 x 10^-20	301	31	217	46	90.66%	17.49%	332	263	RefGen V2	χ2 p-value for B73 x Mo17: '1.78e-20' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G095078	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.66 x 10^-11	408	97	201	153	80.79%	43.22%	505	354	RefGen V2	χ2 p-value for B73 x Mo17: '1.66e-11' χ2 p-value for Mo17 x B73: '8.13e-21' Biased in favor of strain: 'B73'
GRMZM2G095078	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.66 x 10^-8	190	79	195	101	70.63%	34.12%	269	296	RefGen V2	χ2 p-value for B73 x Mo17: '1.31e-11' χ2 p-value for Mo17 x B73: '4.66e-08' Biased in favor of strain: 'B73'
GRMZM2G095043	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.75 x 10^-15	621	372	531	292	62.54%	35.48%	993	823	RefGen V2	χ2 p-value for B73 x Mo17: '2.75e-15' χ2 p-value for Mo17 x B73: '8.02e-17' Biased in favor of strain: 'B73'
GRMZM2G095043	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.48688 x 10^-1	375	172	252	270	68.56%	51.72%	547	522	RefGen V2	χ2 p-value for B73 x Mo17: '.348688' χ2 p-value for Mo17 x B73: '4.42e-13' Biased in favor of strain: ''
GRMZM2G095025	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G095025	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.151 x 10^-3	21	7	33	8	75.00%	19.51%	28	41	RefGen V2	χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0000945' Biased in favor of strain: 'B73'
GRMZM2G095020	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.41 x 10^-15	101	15	107	9	87.07%	7.76%	116	116	RefGen V2	χ2 p-value for B73 x Mo17: '1.41e-15' χ2 p-value for Mo17 x B73: '9.11e-20' Biased in favor of strain: 'B73'
GRMZM2G095020	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.73 x 10^-6	44	0	24	2	100.00%	7.69%	44	26	RefGen V2	χ2 p-value for B73 x Mo17: '2.73e-06' χ2 p-value for Mo17 x B73: '1.78e-10' Biased in favor of strain: 'B73'
GRMZM2G094999	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.21671 x 10^-2	29	6	11	8	82.86%	42.11%	35	19	RefGen V2	χ2 p-value for B73 x Mo17: '.0421671' χ2 p-value for Mo17 x B73: '.0231409' Biased in favor of strain: ''
GRMZM2G094999	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.153026 x 10^-1	52	47	43	30	52.53%	41.10%	99	73	RefGen V2	χ2 p-value for B73 x Mo17: '.6153026' χ2 p-value for Mo17 x B73: '.1281257' Biased in favor of strain: ''
GRMZM2G094988	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	6	4	80.00%	40.00%	5	10	RefGen V2	χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.5270892' Biased in favor of strain: ''
GRMZM2G094988	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	0	3	5	100.00%	62.50%	6	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.8025872' Biased in favor of strain: ''
GRMZM2G094978	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.555246 x 10^-1	27	17	4	13	61.36%	76.47%	44	17	RefGen V2	χ2 p-value for B73 x Mo17: '.4555246' χ2 p-value for Mo17 x B73: '.3911726' Biased in favor of strain: ''
GRMZM2G094978	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.18606 x 10^-2	8	17	5	13	32.00%	72.22%	25	18	RefGen V2	χ2 p-value for B73 x Mo17: '.0718606' χ2 p-value for Mo17 x B73: '.0593464' Biased in favor of strain: ''
GRMZM2G094959	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1412 x 10^-2	1	10	1	9	9.09%	90.00%	11	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0066556' χ2 p-value for Mo17 x B73: '.011412' Biased in favor of strain: 'Mo17'
GRMZM2G094959	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		13	5	0	9	72.22%	100.00%	18	9	RefGen V2	χ2 p-value for B73 x Mo17: '.6170881' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: ''
GRMZM2G094955	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	531	14	253	13	97.43%	4.89%	545	266	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G094955	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.01 x 10^-5	79	1	21	1	98.75%	4.55%	80	22	RefGen V2	χ2 p-value for B73 x Mo17: '2.77e-18' χ2 p-value for Mo17 x B73: '.0000201' Biased in favor of strain: 'B73'
GRMZM2G094951	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.9422 x 10^-2	206	168	165	107	55.08%	39.34%	374	272	RefGen V2	χ2 p-value for B73 x Mo17: '.049422' χ2 p-value for Mo17 x B73: '.0004368' Biased in favor of strain: 'B73'
GRMZM2G094951	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.97 x 10^-21	684	151	426	321	81.92%	42.97%	835	747	RefGen V2	χ2 p-value for B73 x Mo17: '8.97e-21' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G094939	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	0	2	0	100.00%	0.00%	6	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G094939	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G094928	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.53 x 10^-17	1012	293	571	474	77.55%	45.36%	1305	1045	RefGen V2	χ2 p-value for B73 x Mo17: '7.53e-17' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G094928	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3722	1699	3124	1461	68.66%	31.86%	5421	4585	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G094900	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.47881 x 10^-2	38	23	32	17	62.30%	34.69%	61	49	RefGen V2	χ2 p-value for B73 x Mo17: '.0547881' χ2 p-value for Mo17 x B73: '.0321246' Biased in favor of strain: ''
GRMZM2G094900	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	3	100.00%	100.00%	1	3	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G094892	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.53 x 10^-9	9	39	9	106	18.75%	92.17%	48	115	RefGen V2	χ2 p-value for B73 x Mo17: '1.89e-12' χ2 p-value for Mo17 x B73: '6.53e-09' Biased in favor of strain: 'Mo17'
GRMZM2G094892	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.251991 x 10^-1	42	40	60	18	51.22%	23.08%	82	78	RefGen V2	χ2 p-value for B73 x Mo17: '.8251991' χ2 p-value for Mo17 x B73: '1.98e-06' Biased in favor of strain: ''
GRMZM2G094884	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	3	3	66.67%	50.00%	3	6	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G094884	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	7	2		22.22%	0	9	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G094871	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.391191 x 10^-1	710	373	471	724	65.56%	60.59%	1083	1195	RefGen V2	χ2 p-value for B73 x Mo17: '.4391191' χ2 p-value for Mo17 x B73: '8.23e-06' Biased in favor of strain: ''
GRMZM2G094871	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.15922 x 10^-2	511	305	420	356	62.62%	45.88%	816	776	RefGen V2	χ2 p-value for B73 x Mo17: '5.54e-13' χ2 p-value for Mo17 x B73: '.0215922' Biased in favor of strain: 'B73'
GRMZM2G094867	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	706	204	576	192	77.58%	25.00%	910	768	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G094867	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.29 x 10^-14	433	94	204	197	82.16%	49.13%	527	401	RefGen V2	χ2 p-value for B73 x Mo17: '4.47e-14' χ2 p-value for Mo17 x B73: '9.29e-14' Biased in favor of strain: 'B73'
GRMZM2G094850	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.461074 x 10^-1	31	9	30	32	77.50%	51.61%	40	62	RefGen V2	χ2 p-value for B73 x Mo17: '.1461074' χ2 p-value for Mo17 x B73: '.011921' Biased in favor of strain: ''
GRMZM2G094850	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.19743 x 10^-2	154	124	256	126	55.40%	32.98%	278	382	RefGen V2	χ2 p-value for B73 x Mo17: '.0719743' χ2 p-value for Mo17 x B73: '2.90e-11' Biased in favor of strain: ''
GRMZM2G094792	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.381849 x 10^-1	337	251	219	195	57.31%	47.10%	588	414	RefGen V2	χ2 p-value for B73 x Mo17: '.0003903' χ2 p-value for Mo17 x B73: '.2381849' Biased in favor of strain: ''
GRMZM2G094792	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.05 x 10^-5	324	98	208	177	76.78%	45.97%	422	385	RefGen V2	χ2 p-value for B73 x Mo17: '.0000105' χ2 p-value for Mo17 x B73: '7.12e-18' Biased in favor of strain: 'B73'
GRMZM2G094771	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.31326 x 10^-2	26	3	22	21	89.66%	48.84%	29	43	RefGen V2	χ2 p-value for B73 x Mo17: '.0086366' χ2 p-value for Mo17 x B73: '.0131326' Biased in favor of strain: ''
GRMZM2G094771	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.672575 x 10^-1	22	35	30	22	38.60%	42.31%	57	52	RefGen V2	χ2 p-value for B73 x Mo17: '.0850891' χ2 p-value for Mo17 x B73: '.2672575' Biased in favor of strain: ''
GRMZM2G094768	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		14	6	5	2	70.00%	28.57%	20	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0736383' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: ''
GRMZM2G094768	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	7	0	100.00%	0.00%	1	7	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: ''
GRMZM2G094742	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	15673	5354	9207	10036	74.54%	52.15%	21027	19243	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G094742	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	5935	3157	5472	4177	65.28%	43.29%	9092	9649	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G094736	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	0	100.00%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G094736	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	0		0.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G094723	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.07 x 10^-4	0	12	2	34	0.00%	94.44%	12	36	RefGen V2	χ2 p-value for B73 x Mo17: '9.63e-07' χ2 p-value for Mo17 x B73: '.000407' Biased in favor of strain: 'Mo17'
GRMZM2G094723	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.81 x 10^-5	30	78	33	76	27.78%	69.72%	108	109	RefGen V2	χ2 p-value for B73 x Mo17: '3.86e-06' χ2 p-value for Mo17 x B73: '.0000381' Biased in favor of strain: 'Mo17'
GRMZM2G094712	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.550652 x 10^-1	9493	7957	7064	7011	54.40%	49.81%	17450	14075	RefGen V2	χ2 p-value for B73 x Mo17: '2.98e-31' χ2 p-value for Mo17 x B73: '.6550652' Biased in favor of strain: ''
GRMZM2G094712	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	26374	10404	13602	21995	71.71%	61.79%	36778	35597	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G094705	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.311592 x 10^-1	62	26	22	45	70.45%	67.16%	88	67	RefGen V2	χ2 p-value for B73 x Mo17: '.4510075' χ2 p-value for Mo17 x B73: '.9311592' Biased in favor of strain: ''
GRMZM2G094705	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.07874 x 10^-2	65	39	75	42	62.50%	35.90%	104	117	RefGen V2	χ2 p-value for B73 x Mo17: '.0107874' χ2 p-value for Mo17 x B73: '.0022819' Biased in favor of strain: 'B73'
GRMZM2G094699	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.18 x 10^-11	339	139	378	215	70.92%	36.26%	478	593	RefGen V2	χ2 p-value for B73 x Mo17: '5.81e-20' χ2 p-value for Mo17 x B73: '2.18e-11' Biased in favor of strain: 'B73'
GRMZM2G094699	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.03 x 10^-5	205	54	132	132	79.15%	50.00%	259	264	RefGen V2	χ2 p-value for B73 x Mo17: '.0000203' χ2 p-value for Mo17 x B73: '9.22e-09' Biased in favor of strain: 'B73'
GRMZM2G094698	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.63 x 10^-6	703	253	332	371	73.54%	52.77%	956	703	RefGen V2	χ2 p-value for B73 x Mo17: '6.63e-06' χ2 p-value for Mo17 x B73: '5.54e-15' Biased in favor of strain: 'B73'
GRMZM2G094698	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.51337 x 10^-2	189	115	155	118	62.17%	43.22%	304	273	RefGen V2	χ2 p-value for B73 x Mo17: '.0000219' χ2 p-value for Mo17 x B73: '.0251337' Biased in favor of strain: 'B73'
GRMZM2G094666	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.41 x 10^-15	99	2	85	8	98.02%	8.60%	101	93	RefGen V2	χ2 p-value for B73 x Mo17: '4.83e-22' χ2 p-value for Mo17 x B73: '1.41e-15' Biased in favor of strain: 'B73'
GRMZM2G094666	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.43 x 10^-11	95	2	47	8	97.94%	14.55%	97	55	RefGen V2	χ2 p-value for B73 x Mo17: '6.43e-11' χ2 p-value for Mo17 x B73: '2.41e-16' Biased in favor of strain: 'B73'
GRMZM2G094664	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.17044 x 10^-2	208	83	184	157	71.48%	46.04%	291	341	RefGen V2	χ2 p-value for B73 x Mo17: '.0817044' χ2 p-value for Mo17 x B73: '6.50e-16' Biased in favor of strain: ''
GRMZM2G094664	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.13909 x 10^-2	151	184	146	182	45.07%	55.49%	335	328	RefGen V2	χ2 p-value for B73 x Mo17: '.0713909' χ2 p-value for Mo17 x B73: '.0468374' Biased in favor of strain: ''
GRMZM2G094655	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.281545 x 10^-1	52	62	61	62	45.61%	50.41%	114	123	RefGen V2	χ2 p-value for B73 x Mo17: '.3489717' χ2 p-value for Mo17 x B73: '.9281545' Biased in favor of strain: ''
GRMZM2G094655	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.250468 x 10^-1	32	27	35	50	54.24%	58.82%	59	85	RefGen V2	χ2 p-value for B73 x Mo17: '.0428358' χ2 p-value for Mo17 x B73: '.1250468' Biased in favor of strain: ''
GRMZM2G094639	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	8111	63	6131	127	99.23%	2.03%	8174	6258	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G094639	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	8675	1613	12152	1397	84.32%	10.31%	10288	13549	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G094632	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	0	2	83.33%	100.00%	6	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G094632	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	2	1	50.00%	33.33%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: ''
GRMZM2G094602	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	6	6	11	0.00%	64.71%	6	17	RefGen V2	χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.8638316' Biased in favor of strain: ''
GRMZM2G094602	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.699585 x 10^-1	317	330	290	283	49.00%	49.39%	647	573	RefGen V2	χ2 p-value for B73 x Mo17: '.6092931' χ2 p-value for Mo17 x B73: '.7699585' Biased in favor of strain: ''
GRMZM2G094599	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.075784 x 10^-1	148	93	111	93	61.41%	45.59%	241	204	RefGen V2	χ2 p-value for B73 x Mo17: '.0003958' χ2 p-value for Mo17 x B73: '.2075784' Biased in favor of strain: ''
GRMZM2G094599	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.32406 x 10^-2	135	95	66	171	58.70%	72.15%	230	237	RefGen V2	χ2 p-value for B73 x Mo17: '.0103334' χ2 p-value for Mo17 x B73: '.0732406' Biased in favor of strain: ''
GRMZM2G094595	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.98 x 10^-5	117	24	193	60	82.98%	23.72%	141	253	RefGen V2	χ2 p-value for B73 x Mo17: '.0000398' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G094595	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.46 x 10^-11	157	58	169	54	73.02%	24.22%	215	223	RefGen V2	χ2 p-value for B73 x Mo17: '1.46e-11' χ2 p-value for Mo17 x B73: '1.35e-14' Biased in favor of strain: 'B73'
GRMZM2G094586	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.86 x 10^-19	352	134	292	113	72.43%	27.90%	486	405	RefGen V2	χ2 p-value for B73 x Mo17: '4.66e-23' χ2 p-value for Mo17 x B73: '5.86e-19' Biased in favor of strain: 'B73'
GRMZM2G094586	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.1786 x 10^-3	104	27	42	46	79.39%	52.27%	131	88	RefGen V2	χ2 p-value for B73 x Mo17: '.0020085' χ2 p-value for Mo17 x B73: '.0041786' Biased in favor of strain: 'B73'
GRMZM2G094581	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.219488 x 10^-1	240	70	75	164	77.42%	68.62%	310	239	RefGen V2	χ2 p-value for B73 x Mo17: '.0000592' χ2 p-value for Mo17 x B73: '.5219488' Biased in favor of strain: ''
GRMZM2G094581	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.56527 x 10^-2	137	60	112	81	69.54%	41.97%	197	193	RefGen V2	χ2 p-value for B73 x Mo17: '4.11e-08' χ2 p-value for Mo17 x B73: '.0256527' Biased in favor of strain: 'B73'
GRMZM2G094579	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.11 x 10^-5	225	106	192	115	67.98%	37.46%	331	307	RefGen V2	χ2 p-value for B73 x Mo17: '6.12e-11' χ2 p-value for Mo17 x B73: '.0000111' Biased in favor of strain: 'B73'
GRMZM2G094579	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.438009 x 10^-1	171	75	77	182	69.51%	70.27%	246	259	RefGen V2	χ2 p-value for B73 x Mo17: '.3438009' χ2 p-value for Mo17 x B73: '.218604' Biased in favor of strain: ''
GRMZM2G094541	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.114532 x 10^-1	13	11	9	22	54.17%	70.97%	24	31	RefGen V2	χ2 p-value for B73 x Mo17: '.1939214' χ2 p-value for Mo17 x B73: '.6114532' Biased in favor of strain: ''
GRMZM2G094541	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.616799 x 10^-1	25	22	29	23	53.19%	44.23%	47	52	RefGen V2	χ2 p-value for B73 x Mo17: '.6616799' χ2 p-value for Mo17 x B73: '.4053805' Biased in favor of strain: ''
GRMZM2G094532	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.94 x 10^-4	62	17	35	12	78.48%	25.53%	79	47	RefGen V2	χ2 p-value for B73 x Mo17: '4.13e-07' χ2 p-value for Mo17 x B73: '.000794' Biased in favor of strain: 'B73'
GRMZM2G094532	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.39 x 10^-13	301	54	112	78	84.79%	41.05%	355	190	RefGen V2	χ2 p-value for B73 x Mo17: '4.39e-13' χ2 p-value for Mo17 x B73: '6.91e-14' Biased in favor of strain: 'B73'
GRMZM2G094526	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	7	3	3	22.22%	50.00%	9	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0046774' χ2 p-value for Mo17 x B73: '.3864762' Biased in favor of strain: ''
GRMZM2G094526	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	1	0	75.00%	0.00%	4	1	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G094510	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		16	0	3	0	100.00%	0.00%	16	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G094510	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G094500	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.0 x 10^-30	478	53	288	146	90.02%	33.64%	531	434	RefGen V2	χ2 p-value for B73 x Mo17: '3.52e-30' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G094500	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	582	119	544	112	83.02%	17.07%	701	656	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G094497	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.11342 x 10^-2	450	377	457	331	54.41%	42.01%	827	788	RefGen V2	χ2 p-value for B73 x Mo17: '.0111342' χ2 p-value for Mo17 x B73: '7.17e-06' Biased in favor of strain: 'B73'
GRMZM2G094497	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.2595 x 10^-3	693	288	322	476	70.64%	59.65%	981	798	RefGen V2	χ2 p-value for B73 x Mo17: '.0082595' χ2 p-value for Mo17 x B73: '.0000261' Biased in favor of strain: 'B73'
GRMZM2G094490	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.035005 x 10^-1	23	11	6	16	67.65%	72.73%	34	22	RefGen V2	χ2 p-value for B73 x Mo17: '.9035005' χ2 p-value for Mo17 x B73: '.5464937' Biased in favor of strain: ''
GRMZM2G094490	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	2	0.00%	100.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G094452	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.02537 x 10^-1	122	114	91	101	51.69%	52.60%	236	192	RefGen V2	χ2 p-value for B73 x Mo17: '.602537' χ2 p-value for Mo17 x B73: '.4704864' Biased in favor of strain: ''
GRMZM2G094452	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.1552 x 10^-3	27	31	35	14	46.55%	28.57%	58	49	RefGen V2	χ2 p-value for B73 x Mo17: '.0011552' χ2 p-value for Mo17 x B73: '1.54e-08' Biased in favor of strain: ''

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