GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G098594	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.434433 x 10^-1	15	6	2	13	71.43%	86.67%	21	15	RefGen V2	χ2 p-value for B73 x Mo17: '.6434433' χ2 p-value for Mo17 x B73: '.1003483' Biased in favor of strain: ''
GRMZM2G098594	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.86714 x 10^-2	31	16	33	12	65.96%	26.67%	47	45	RefGen V2	χ2 p-value for B73 x Mo17: '.0286714' χ2 p-value for Mo17 x B73: '.0017451' Biased in favor of strain: 'B73'
GRMZM2G098583	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.7592 x 10^-3	81	50	61	26	61.83%	29.89%	131	87	RefGen V2	χ2 p-value for B73 x Mo17: '.0067592' χ2 p-value for Mo17 x B73: '.0001752' Biased in favor of strain: 'B73'
GRMZM2G098583	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.32504 x 10^-2	81	25	52	34	76.42%	39.53%	106	86	RefGen V2	χ2 p-value for B73 x Mo17: '.0332504' χ2 p-value for Mo17 x B73: '9.43e-08' Biased in favor of strain: ''
GRMZM2G098577	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.25 x 10^-20	797	183	445	490	81.33%	52.41%	980	935	RefGen V2	χ2 p-value for B73 x Mo17: '2.13e-22' χ2 p-value for Mo17 x B73: '2.25e-20' Biased in favor of strain: 'B73'
GRMZM2G098577	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.25 x 10^-14	452	217	313	152	67.56%	32.69%	669	465	RefGen V2	χ2 p-value for B73 x Mo17: '1.03e-19' χ2 p-value for Mo17 x B73: '8.25e-14' Biased in favor of strain: 'B73'
GRMZM2G098557	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1126	415	1034	474	73.07%	31.43%	1541	1508	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G098557	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3075	602	1530	1040	83.63%	40.47%	3677	2570	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G098527	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.50534 x 10^-2	657	374	340	846	63.72%	71.33%	1031	1186	RefGen V2	χ2 p-value for B73 x Mo17: '.0450534' χ2 p-value for Mo17 x B73: '.0006535' Biased in favor of strain: ''
GRMZM2G098527	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.05986 x 10^-2	309	167	233	181	64.92%	43.72%	476	414	RefGen V2	χ2 p-value for B73 x Mo17: '7.59e-11' χ2 p-value for Mo17 x B73: '.0105986' Biased in favor of strain: 'B73'
GRMZM2G098517	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1562	253	1043	188	86.06%	15.27%	1815	1231	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G098517	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	465	43	192	95	91.54%	33.10%	508	287	RefGen V2	χ2 p-value for B73 x Mo17: '1.33e-32' χ2 p-value for Mo17 x B73: '1.66e-33' Biased in favor of strain: 'B73'
GRMZM2G098496	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.794999 x 10^-1	17	12	14	22	58.62%	61.11%	29	36	RefGen V2	χ2 p-value for B73 x Mo17: '.3580048' χ2 p-value for Mo17 x B73: '.4794999' Biased in favor of strain: ''
GRMZM2G098496	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.917363 x 10^-1	48	25	41	30	65.75%	42.25%	73	71	RefGen V2	χ2 p-value for B73 x Mo17: '.0071036' χ2 p-value for Mo17 x B73: '.1917363' Biased in favor of strain: ''
GRMZM2G098494	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.97 x 10^-17	578	266	527	289	68.48%	35.42%	844	816	RefGen V2	χ2 p-value for B73 x Mo17: '6.64e-27' χ2 p-value for Mo17 x B73: '7.97e-17' Biased in favor of strain: 'B73'
GRMZM2G098494	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5457 x 10^-3	407	153	334	400	72.68%	54.50%	560	734	RefGen V2	χ2 p-value for B73 x Mo17: '.0025457' χ2 p-value for Mo17 x B73: '2.66e-12' Biased in favor of strain: 'B73'
GRMZM2G098442	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	2	6	0	71.43%	0.00%	7	6	RefGen V2	χ2 p-value for B73 x Mo17: '.789277' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: ''
GRMZM2G098442	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	3	0	100.00%	0.00%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G098438	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	5	4	9	37.50%	69.23%	8	13	RefGen V2	χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.1655179' Biased in favor of strain: ''
GRMZM2G098438	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	13	11	80.00%	45.83%	5	24	RefGen V2	χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.0303828' Biased in favor of strain: ''
GRMZM2G098434	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.583592 x 10^-1	134	58	91	99	69.79%	52.11%	192	190	RefGen V2	χ2 p-value for B73 x Mo17: '.3583592' χ2 p-value for Mo17 x B73: '.0000206' Biased in favor of strain: ''
GRMZM2G098434	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.528129 x 10^-1	128	109	119	102	54.01%	46.15%	237	221	RefGen V2	χ2 p-value for B73 x Mo17: '.2171349' χ2 p-value for Mo17 x B73: '.2528129' Biased in favor of strain: ''
GRMZM2G098420	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.905 x 10^-4	156	63	98	57	71.23%	36.77%	219	155	RefGen V2	χ2 p-value for B73 x Mo17: '3.29e-10' χ2 p-value for Mo17 x B73: '.0009905' Biased in favor of strain: 'B73'
GRMZM2G098420	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.678182 x 10^-1	91	42	66	64	68.42%	49.23%	133	130	RefGen V2	χ2 p-value for B73 x Mo17: '.6678182' χ2 p-value for Mo17 x B73: '.0000247' Biased in favor of strain: ''
GRMZM2G098397	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	13	0	6	18.75%	100.00%	16	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0000478' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G098397	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.07039 x 10^-1	60	91	67	87	39.74%	56.49%	151	154	RefGen V2	χ2 p-value for B73 x Mo17: '.0116443' χ2 p-value for Mo17 x B73: '.107039' Biased in favor of strain: ''
GRMZM2G098377	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.6676 x 10^-2	59	15	41	22	79.73%	34.92%	74	63	RefGen V2	χ2 p-value for B73 x Mo17: '3.14e-07' χ2 p-value for Mo17 x B73: '.016676' Biased in favor of strain: 'B73'
GRMZM2G098377	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G098370	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.706 x 10^-4	53	7	46	18	88.33%	28.12%	60	64	RefGen V2	χ2 p-value for B73 x Mo17: '.0003706' χ2 p-value for Mo17 x B73: '6.12e-11' Biased in favor of strain: 'B73'
GRMZM2G098370	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.37 x 10^-4	260	128	150	94	67.01%	38.52%	388	244	RefGen V2	χ2 p-value for B73 x Mo17: '2.07e-11' χ2 p-value for Mo17 x B73: '.000337' Biased in favor of strain: 'B73'
GRMZM2G098346	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1633	457	1588	425	78.13%	21.11%	2090	2013	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G098346	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.78 x 10^-6	114	6	75	71	95.00%	48.63%	120	146	RefGen V2	χ2 p-value for B73 x Mo17: '4.58e-11' χ2 p-value for Mo17 x B73: '3.78e-06' Biased in favor of strain: 'B73'
GRMZM2G098335	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2416	176	1416	265	93.21%	15.76%	2592	1681	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G098335	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1930	473	1849	332	80.32%	15.22%	2403	2181	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G098331	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.7909 x 10^-3	78	151	69	104	34.06%	60.12%	229	173	RefGen V2	χ2 p-value for B73 x Mo17: '1.41e-06' χ2 p-value for Mo17 x B73: '.0077909' Biased in favor of strain: 'Mo17'
GRMZM2G098331	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.090726 x 10^-1	102	58	61	115	63.75%	65.34%	160	176	RefGen V2	χ2 p-value for B73 x Mo17: '.4338113' χ2 p-value for Mo17 x B73: '.7090726' Biased in favor of strain: ''
GRMZM2G098319	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	2	4	2	75.00%	33.33%	8	6	RefGen V2	χ2 p-value for B73 x Mo17: '.6170834' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G098319	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	8	0	4	11.11%	100.00%	9	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0196307' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G098305	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.89 x 10^-6	559	420	596	448	57.10%	42.91%	979	1044	RefGen V2	χ2 p-value for B73 x Mo17: '8.89e-06' χ2 p-value for Mo17 x B73: '4.64e-06' Biased in favor of strain: 'B73'
GRMZM2G098305	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	740	105	336	242	87.57%	41.87%	845	578	RefGen V2	χ2 p-value for B73 x Mo17: '4.98e-38' χ2 p-value for Mo17 x B73: '1.16e-36' Biased in favor of strain: 'B73'
GRMZM2G098301	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	2	100.00%	100.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G098301	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.182822 x 10^-1	48	47	33	44	50.53%	57.14%	95	77	RefGen V2	χ2 p-value for B73 x Mo17: '.9182822' χ2 p-value for Mo17 x B73: '.2099997' Biased in favor of strain: ''
GRMZM2G098298	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	4	1	5	50.00%	83.33%	8	6	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: ''
GRMZM2G098298	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	2	4	11	71.43%	73.33%	7	15	RefGen V2	χ2 p-value for B73 x Mo17: '.789277' χ2 p-value for Mo17 x B73: '.5838825' Biased in favor of strain: ''
GRMZM2G098290	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.1898 x 10^-3	22	1	36	5	95.65%	12.20%	23	41	RefGen V2	χ2 p-value for B73 x Mo17: '.0031898' χ2 p-value for Mo17 x B73: '1.37e-13' Biased in favor of strain: 'B73'
GRMZM2G098290	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.18 x 10^-5	84	36	106	28	70.00%	20.90%	120	134	RefGen V2	χ2 p-value for B73 x Mo17: '.0000118' χ2 p-value for Mo17 x B73: '1.60e-11' Biased in favor of strain: 'B73'
GRMZM2G098239	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	369	75	406	86	83.11%	17.48%	444	492	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G098239	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	3.5516 x 10^-3	17	0	0	18	100.00%	100.00%	17	18	RefGen V2	χ2 p-value for B73 x Mo17: '.0035516' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: ''
GRMZM2G098237	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.46 x 10^-6	202	49	116	106	80.48%	47.75%	251	222	RefGen V2	χ2 p-value for B73 x Mo17: '3.46e-06' χ2 p-value for Mo17 x B73: '2.24e-09' Biased in favor of strain: 'B73'
GRMZM2G098237	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.275083 x 10^-1	123	100	136	112	55.16%	45.16%	223	248	RefGen V2	χ2 p-value for B73 x Mo17: '.1235131' χ2 p-value for Mo17 x B73: '.1275083' Biased in favor of strain: ''
GRMZM2G098227	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.891161 x 10^-1	271	184	209	183	59.56%	46.68%	455	392	RefGen V2	χ2 p-value for B73 x Mo17: '.0000453' χ2 p-value for Mo17 x B73: '.1891161' Biased in favor of strain: ''
GRMZM2G098227	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.838138 x 10^-1	328	133	169	305	71.15%	64.35%	461	474	RefGen V2	χ2 p-value for B73 x Mo17: '.0411747' χ2 p-value for Mo17 x B73: '.2838138' Biased in favor of strain: ''
GRMZM2G098214	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	0	0.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G098214	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	4	2	100.00%	33.33%	2	6	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: ''
GRMZM2G098212	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.490597 x 10^-1	568	473	491	489	54.56%	49.90%	1041	980	RefGen V2	χ2 p-value for B73 x Mo17: '.0032357' χ2 p-value for Mo17 x B73: '.9490597' Biased in favor of strain: ''
GRMZM2G098212	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.54 x 10^-7	980	363	513	625	72.97%	54.92%	1343	1138	RefGen V2	χ2 p-value for B73 x Mo17: '9.54e-07' χ2 p-value for Mo17 x B73: '4.26e-17' Biased in favor of strain: 'B73'
GRMZM2G098208	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G098208	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	2	1	2	33.33%	66.67%	3	3	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G098187	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.71 x 10^-11	118	37	207	79	76.13%	27.62%	155	286	RefGen V2	χ2 p-value for B73 x Mo17: '7.71e-11' χ2 p-value for Mo17 x B73: '3.77e-14' Biased in favor of strain: 'B73'
GRMZM2G098187	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.698155 x 10^-1	10	3	3	8	76.92%	72.73%	13	11	RefGen V2	χ2 p-value for B73 x Mo17: '.4327761' χ2 p-value for Mo17 x B73: '.6698155' Biased in favor of strain: ''
GRMZM2G098167	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.60196 x 10^-1	24	9	13	18	72.73%	58.06%	33	31	RefGen V2	χ2 p-value for B73 x Mo17: '.460196' χ2 p-value for Mo17 x B73: '.3096288' Biased in favor of strain: ''
GRMZM2G098167	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.85 x 10^-6	400	276	393	232	59.17%	37.12%	676	625	RefGen V2	χ2 p-value for B73 x Mo17: '1.85e-06' χ2 p-value for Mo17 x B73: '1.19e-10' Biased in favor of strain: 'B73'
GRMZM2G098088	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1287	535	1091	395	70.64%	26.58%	1822	1486	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G098088	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.6081 x 10^-3	295	103	187	236	74.12%	55.79%	398	423	RefGen V2	χ2 p-value for B73 x Mo17: '.0016081' χ2 p-value for Mo17 x B73: '2.09e-06' Biased in favor of strain: 'B73'
GRMZM2G098084	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.003509 x 10^-1	13	2	23	2	86.67%	8.00%	15	25	RefGen V2	χ2 p-value for B73 x Mo17: '.1003509' χ2 p-value for Mo17 x B73: '4.89e-10' Biased in favor of strain: ''
GRMZM2G098084	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.233396 x 10^-1	22	17	24	10	56.41%	29.41%	39	34	RefGen V2	χ2 p-value for B73 x Mo17: '.4233396' χ2 p-value for Mo17 x B73: '.0163512' Biased in favor of strain: ''
GRMZM2G098079	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.44619 x 10^-2	343	240	234	184	58.83%	44.02%	583	418	RefGen V2	χ2 p-value for B73 x Mo17: '.0000199' χ2 p-value for Mo17 x B73: '.0144619' Biased in favor of strain: 'B73'
GRMZM2G098079	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.420099 x 10^-1	252	125	120	277	66.84%	69.77%	377	397	RefGen V2	χ2 p-value for B73 x Mo17: '.9420099' χ2 p-value for Mo17 x B73: '.189156' Biased in favor of strain: ''
GRMZM2G098078	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.19 x 10^-7	79	7	32	6	91.86%	15.79%	86	38	RefGen V2	χ2 p-value for B73 x Mo17: '7.19e-07' χ2 p-value for Mo17 x B73: '2.87e-11' Biased in favor of strain: 'B73'
GRMZM2G098078	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.9118 x 10^-3	49	26	49	20	65.33%	28.99%	75	69	RefGen V2	χ2 p-value for B73 x Mo17: '.0079118' χ2 p-value for Mo17 x B73: '.0004809' Biased in favor of strain: 'B73'
GRMZM2G098076	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.272594 x 10^-1	8	10	10	11	44.44%	52.38%	18	21	RefGen V2	χ2 p-value for B73 x Mo17: '.6373519' χ2 p-value for Mo17 x B73: '.8272594' Biased in favor of strain: ''
GRMZM2G098076	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.496797 x 10^-1	8	6	7	26	57.14%	78.79%	14	33	RefGen V2	χ2 p-value for B73 x Mo17: '.4496797' χ2 p-value for Mo17 x B73: '.1396495' Biased in favor of strain: ''
GRMZM2G098063	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G098063	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	0	8	5	100.00%	38.46%	9	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.4053805' Biased in favor of strain: ''
GRMZM2G098058	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.493259 x 10^-1	122	115	57	101	51.48%	63.92%	237	158	RefGen V2	χ2 p-value for B73 x Mo17: '.6493259' χ2 p-value for Mo17 x B73: '.0004645' Biased in favor of strain: ''
GRMZM2G098058	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.230743 x 10^-1	7	3	14	7	70.00%	33.33%	10	21	RefGen V2	χ2 p-value for B73 x Mo17: '.8230743' χ2 p-value for Mo17 x B73: '.0011937' Biased in favor of strain: ''
GRMZM2G098042	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.0912 x 10^-2	116	39	96	81	74.84%	45.76%	155	177	RefGen V2	χ2 p-value for B73 x Mo17: '.030912' χ2 p-value for Mo17 x B73: '3.64e-09' Biased in favor of strain: ''
GRMZM2G098042	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.12 x 10^-15	258	92	207	74	73.71%	26.33%	350	281	RefGen V2	χ2 p-value for B73 x Mo17: '7.12e-19' χ2 p-value for Mo17 x B73: '2.12e-15' Biased in favor of strain: 'B73'
GRMZM2G098037	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		58	0	0	0	100.00%		58	0	RefGen V2	χ2 p-value for B73 x Mo17: '2.62e-14' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G098037	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		675	0	0	0	100.00%		675	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G098015	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.1195 x 10^-3	47	8	47	15	85.45%	24.19%	55	62	RefGen V2	χ2 p-value for B73 x Mo17: '.0031195' χ2 p-value for Mo17 x B73: '1.30e-12' Biased in favor of strain: 'B73'
GRMZM2G098015	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.31 x 10^-24	145	12	169	26	92.36%	13.33%	157	195	RefGen V2	χ2 p-value for B73 x Mo17: '2.55e-26' χ2 p-value for Mo17 x B73: '1.31e-24' Biased in favor of strain: 'B73'
GRMZM2G098011	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.93 x 10^-10	202	80	156	62	71.63%	28.44%	282	218	RefGen V2	χ2 p-value for B73 x Mo17: '3.73e-13' χ2 p-value for Mo17 x B73: '1.93e-10' Biased in favor of strain: 'B73'
GRMZM2G098011	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.06 x 10^-12	470	113	187	184	80.62%	49.60%	583	371	RefGen V2	χ2 p-value for B73 x Mo17: '8.96e-13' χ2 p-value for Mo17 x B73: '3.06e-12' Biased in favor of strain: 'B73'
GRMZM2G097995	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.06212 x 10^-1	281	167	170	382	62.72%	69.20%	448	552	RefGen V2	χ2 p-value for B73 x Mo17: '.0766086' χ2 p-value for Mo17 x B73: '.206212' Biased in favor of strain: ''
GRMZM2G097995	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.551322 x 10^-1	59	61	55	80	49.17%	59.26%	120	135	RefGen V2	χ2 p-value for B73 x Mo17: '.8551322' χ2 p-value for Mo17 x B73: '.0314243' Biased in favor of strain: ''
GRMZM2G097987	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	45	45	30	28	50.00%	48.28%	90	58	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.792849' Biased in favor of strain: ''
GRMZM2G097987	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.166593 x 10^-1	6	7	14	11	46.15%	44.00%	13	25	RefGen V2	χ2 p-value for B73 x Mo17: '.1166593' χ2 p-value for Mo17 x B73: '.0162095' Biased in favor of strain: ''
GRMZM2G097977	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.71 x 10^-12	1236	370	537	723	76.96%	57.38%	1606	1260	RefGen V2	χ2 p-value for B73 x Mo17: '2.10e-18' χ2 p-value for Mo17 x B73: '2.71e-12' Biased in favor of strain: 'B73'
GRMZM2G097977	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	800	331	658	218	70.73%	24.89%	1131	876	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G097972	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.059032 x 10^-1	4	16	3	7	20.00%	70.00%	20	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0072904' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: ''
GRMZM2G097972	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.5457 x 10^-3	7	18	2	24	28.00%	92.31%	25	26	RefGen V2	χ2 p-value for B73 x Mo17: '.0000411' χ2 p-value for Mo17 x B73: '.0055457' Biased in favor of strain: 'Mo17'
GRMZM2G097959	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.155145 x 10^-1	588	349	334	725	62.75%	68.46%	937	1059	RefGen V2	χ2 p-value for B73 x Mo17: '.0110481' χ2 p-value for Mo17 x B73: '.2155145' Biased in favor of strain: ''
GRMZM2G097959	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.157191 x 10^-1	302	386	282	263	43.90%	48.26%	688	545	RefGen V2	χ2 p-value for B73 x Mo17: '.0013625' χ2 p-value for Mo17 x B73: '.4157191' Biased in favor of strain: ''
GRMZM2G097900	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3164	1523	1508	787	67.51%	34.29%	4687	2295	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G097900	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.726934 x 10^-1	45	56	205	364	44.55%	63.97%	101	569	RefGen V2	χ2 p-value for B73 x Mo17: '2.43e-06' χ2 p-value for Mo17 x B73: '.1726934' Biased in favor of strain: ''
GRMZM2G097896	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.4351 x 10^-3	494	198	299	333	71.39%	52.69%	692	632	RefGen V2	χ2 p-value for B73 x Mo17: '.0084351' χ2 p-value for Mo17 x B73: '9.08e-14' Biased in favor of strain: 'B73'
GRMZM2G097896	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.3448 x 10^-2	314	245	301	260	56.17%	46.35%	559	561	RefGen V2	χ2 p-value for B73 x Mo17: '.0035185' χ2 p-value for Mo17 x B73: '.083448' Biased in favor of strain: ''
GRMZM2G097884	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.2 x 10^-7	291	177	301	189	62.18%	38.57%	468	490	RefGen V2	χ2 p-value for B73 x Mo17: '1.37e-07' χ2 p-value for Mo17 x B73: '4.20e-07' Biased in favor of strain: 'B73'
GRMZM2G097884	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.09 x 10^-7	86	9	54	19	90.53%	26.03%	95	73	RefGen V2	χ2 p-value for B73 x Mo17: '8.09e-07' χ2 p-value for Mo17 x B73: '1.76e-13' Biased in favor of strain: 'B73'

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