GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G100260	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.4 x 10^-14	475	208	346	171	69.55%	33.08%	683	517	RefGen V2	χ2 p-value for B73 x Mo17: '1.67e-24' χ2 p-value for Mo17 x B73: '1.40e-14' Biased in favor of strain: 'B73'
GRMZM2G100260	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.012 x 10^-4	401	141	219	304	73.99%	58.13%	542	523	RefGen V2	χ2 p-value for B73 x Mo17: '.0003012' χ2 p-value for Mo17 x B73: '.0000342' Biased in favor of strain: 'B73'
GRMZM2G100248	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	8	0	4	0.00%	100.00%	8	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G100248	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5654 x 10^-3	0	12	0	10	0.00%	100.00%	12	10	RefGen V2	χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: 'Mo17'
GRMZM2G100246	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.74 x 10^-11	380	149	216	97	71.83%	30.99%	529	313	RefGen V2	χ2 p-value for B73 x Mo17: '9.82e-24' χ2 p-value for Mo17 x B73: '1.74e-11' Biased in favor of strain: 'B73'
GRMZM2G100246	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.64819 x 10^-2	219	133	228	124	62.22%	35.23%	352	352	RefGen V2	χ2 p-value for B73 x Mo17: '.0764819' χ2 p-value for Mo17 x B73: '6.36e-36' Biased in favor of strain: ''
GRMZM2G100242	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.6 x 10^-14	241	32	145	97	88.28%	40.08%	273	242	RefGen V2	χ2 p-value for B73 x Mo17: '3.60e-14' χ2 p-value for Mo17 x B73: '1.74e-18' Biased in favor of strain: 'B73'
GRMZM2G100242	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.78 x 10^-17	290	119	325	113	70.90%	25.80%	409	438	RefGen V2	χ2 p-value for B73 x Mo17: '2.78e-17' χ2 p-value for Mo17 x B73: '4.08e-24' Biased in favor of strain: 'B73'
GRMZM2G100234	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	7	0	14	0.00%	100.00%	7	14	RefGen V2	χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: ''
GRMZM2G100234	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G100229	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.547952 x 10^-1	951	438	578	690	68.47%	54.42%	1389	1268	RefGen V2	χ2 p-value for B73 x Mo17: '.1547952' χ2 p-value for Mo17 x B73: '2.17e-20' Biased in favor of strain: ''
GRMZM2G100229	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7233 x 10^-3	650	499	559	459	56.57%	45.09%	1149	1018	RefGen V2	χ2 p-value for B73 x Mo17: '8.40e-06' χ2 p-value for Mo17 x B73: '.0017233' Biased in favor of strain: 'B73'
GRMZM2G100225	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	760	74	535	71	91.13%	11.72%	834	606	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G100225	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1136	78	560	119	93.57%	17.53%	1214	679	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G100208	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	3	0.00%	100.00%	1	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G100208	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	2	3	100.00%	60.00%	5	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''
GRMZM2G100176	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.72566 x 10^-2	142	109	111	148	56.57%	57.14%	251	259	RefGen V2	χ2 p-value for B73 x Mo17: '.0372566' χ2 p-value for Mo17 x B73: '.0215011' Biased in favor of strain: ''
GRMZM2G100176	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.223713 x 10^-1	323	156	206	218	67.43%	51.42%	479	424	RefGen V2	χ2 p-value for B73 x Mo17: '.7223713' χ2 p-value for Mo17 x B73: '2.70e-11' Biased in favor of strain: ''
GRMZM2G100158	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	4	27	0.00%	87.10%	3	31	RefGen V2	χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.0158217' Biased in favor of strain: ''
GRMZM2G100158	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.075495 x 10^-1	318	460	446	477	40.87%	51.68%	778	923	RefGen V2	χ2 p-value for B73 x Mo17: '3.56e-07' χ2 p-value for Mo17 x B73: '.3075495' Biased in favor of strain: ''
GRMZM2G100152	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.71736 x 10^-2	225	146	179	146	60.65%	44.92%	371	325	RefGen V2	χ2 p-value for B73 x Mo17: '.0000411' χ2 p-value for Mo17 x B73: '.0671736' Biased in favor of strain: ''
GRMZM2G100152	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.344182 x 10^-1	347	179	112	280	65.97%	71.43%	526	392	RefGen V2	χ2 p-value for B73 x Mo17: '.7344182' χ2 p-value for Mo17 x B73: '.0455004' Biased in favor of strain: ''
GRMZM2G100146	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.84221 x 10^-2	90	15	37	44	85.71%	54.32%	105	81	RefGen V2	χ2 p-value for B73 x Mo17: '.0000347' χ2 p-value for Mo17 x B73: '.0184221' Biased in favor of strain: ''
GRMZM2G100146	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.0527 x 10^-3	80	43	56	30	65.04%	34.88%	123	86	RefGen V2	χ2 p-value for B73 x Mo17: '.0008494' χ2 p-value for Mo17 x B73: '.0050527' Biased in favor of strain: 'B73'
GRMZM2G100133	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.151599 x 10^-1	207	233	310	234	47.05%	43.01%	440	544	RefGen V2	χ2 p-value for B73 x Mo17: '.2151599' χ2 p-value for Mo17 x B73: '.0011201' Biased in favor of strain: ''
GRMZM2G100133	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	0	0.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G100121	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.11 x 10^-18	743	161	405	446	82.19%	52.41%	904	851	RefGen V2	χ2 p-value for B73 x Mo17: '4.12e-23' χ2 p-value for Mo17 x B73: '1.11e-18' Biased in favor of strain: 'B73'
GRMZM2G100121	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.77 x 10^-23	562	258	507	235	68.54%	31.67%	820	742	RefGen V2	χ2 p-value for B73 x Mo17: '2.51e-26' χ2 p-value for Mo17 x B73: '1.77e-23' Biased in favor of strain: 'B73'
GRMZM2G100120	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	0	1	50.00%	100.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G100120	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	0	4	50.00%	100.00%	4	4	RefGen V2	χ2 p-value for B73 x Mo17: '.4794928' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G100118	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.531 x 10^-4	416	148	207	223	73.76%	51.86%	564	430	RefGen V2	χ2 p-value for B73 x Mo17: '.0003531' χ2 p-value for Mo17 x B73: '7.36e-11' Biased in favor of strain: 'B73'
GRMZM2G100118	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.24 x 10^-10	284	154	321	172	64.84%	34.89%	438	493	RefGen V2	χ2 p-value for B73 x Mo17: '5.24e-10' χ2 p-value for Mo17 x B73: '1.94e-11' Biased in favor of strain: 'B73'
GRMZM2G100116	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.702828 x 10^-1	74	76	72	86	49.33%	54.43%	150	158	RefGen V2	χ2 p-value for B73 x Mo17: '.8702828' χ2 p-value for Mo17 x B73: '.2653735' Biased in favor of strain: ''
GRMZM2G100116	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.39 x 10^-5	79	78	21	130	50.32%	86.09%	157	151	RefGen V2	χ2 p-value for B73 x Mo17: '.0000139' χ2 p-value for Mo17 x B73: '4.11e-07' Biased in favor of strain: 'Mo17'
GRMZM2G100114	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.040102 x 10^-1	138	56	106	239	71.13%	69.28%	194	345	RefGen V2	χ2 p-value for B73 x Mo17: '.1868723' χ2 p-value for Mo17 x B73: '.3040102' Biased in favor of strain: ''
GRMZM2G100114	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.256399 x 10^-1	156	131	99	104	54.36%	51.23%	287	203	RefGen V2	χ2 p-value for B73 x Mo17: '.1400235' χ2 p-value for Mo17 x B73: '.7256399' Biased in favor of strain: ''
GRMZM2G100107	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.84 x 10^-9	288	118	154	68	70.94%	30.63%	406	222	RefGen V2	χ2 p-value for B73 x Mo17: '3.26e-17' χ2 p-value for Mo17 x B73: '7.84e-09' Biased in favor of strain: 'B73'
GRMZM2G100107	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.2 x 10^-9	242	50	150	88	82.88%	36.97%	292	238	RefGen V2	χ2 p-value for B73 x Mo17: '4.20e-09' χ2 p-value for Mo17 x B73: '2.55e-22' Biased in favor of strain: 'B73'
GRMZM2G100103	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.00395 x 10^-2	82	143	87	126	36.44%	59.15%	225	213	RefGen V2	χ2 p-value for B73 x Mo17: '6.79e-22' χ2 p-value for Mo17 x B73: '.0200395' Biased in favor of strain: ''
GRMZM2G100103	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.2904 x 10^-3	65	28	52	28	69.89%	35.00%	93	80	RefGen V2	χ2 p-value for B73 x Mo17: '.0001247' χ2 p-value for Mo17 x B73: '.0072904' Biased in favor of strain: 'B73'
GRMZM2G100102	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	4	0	100.00%	0.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G100102	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	1	0	0.00%	0.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G100090	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.13 x 10^-7	151	193	50	217	43.90%	81.27%	344	267	RefGen V2	χ2 p-value for B73 x Mo17: '3.26e-19' χ2 p-value for Mo17 x B73: '4.13e-07' Biased in favor of strain: 'Mo17'
GRMZM2G100090	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.35 x 10^-6	177	272	127	221	39.42%	63.51%	449	348	RefGen V2	χ2 p-value for B73 x Mo17: '7.35e-06' χ2 p-value for Mo17 x B73: '4.68e-07' Biased in favor of strain: 'Mo17'
GRMZM2G100084	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.13 x 10^-15	360	97	229	89	78.77%	27.99%	457	318	RefGen V2	χ2 p-value for B73 x Mo17: '8.77e-35' χ2 p-value for Mo17 x B73: '4.13e-15' Biased in favor of strain: 'B73'
GRMZM2G100084	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.62 x 10^-7	180	37	145	57	82.95%	28.22%	217	202	RefGen V2	χ2 p-value for B73 x Mo17: '3.62e-07' χ2 p-value for Mo17 x B73: '4.51e-31' Biased in favor of strain: 'B73'
GRMZM2G100076	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		17	0	5	2	100.00%	28.57%	17	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0035516' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: ''
GRMZM2G100076	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.828 x 10^-4	33	0	14	0	100.00%	0.00%	33	14	RefGen V2	χ2 p-value for B73 x Mo17: '9.22e-09' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: 'B73'
GRMZM2G100067	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.46 x 10^-5	41	6	22	2	87.23%	8.33%	47	24	RefGen V2	χ2 p-value for B73 x Mo17: '3.30e-07' χ2 p-value for Mo17 x B73: '.0000446' Biased in favor of strain: 'B73'
GRMZM2G100067	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.06 x 10^-7	66	2	93	2	97.06%	2.11%	68	95	RefGen V2	χ2 p-value for B73 x Mo17: '1.06e-07' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G100060	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	2	0.00%	100.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G100060	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G100043	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.58876 x 10^-2	181	137	183	145	56.92%	44.21%	318	328	RefGen V2	χ2 p-value for B73 x Mo17: '.0136099' χ2 p-value for Mo17 x B73: '.0358876' Biased in favor of strain: 'B73'
GRMZM2G100043	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.246056 x 10^-1	236	150	144	260	61.14%	64.36%	386	404	RefGen V2	χ2 p-value for B73 x Mo17: '.0212501' χ2 p-value for Mo17 x B73: '.3246056' Biased in favor of strain: ''
GRMZM2G100020	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	2	1	0.00%	33.33%	1	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: ''
GRMZM2G100020	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.774686 x 10^-1	13	16	29	10	44.83%	25.64%	29	39	RefGen V2	χ2 p-value for B73 x Mo17: '.5774686' χ2 p-value for Mo17 x B73: '.0023467' Biased in favor of strain: ''
GRMZM2G100018	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	214261	35902	22289	9498	85.65%	29.88%	250163	31787	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G100018	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1779202	216678	216659	68143	89.14%	23.93%	1995880	284802	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G099989	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.57 x 10^-11	328	71	202	121	82.21%	37.46%	399	323	RefGen V2	χ2 p-value for B73 x Mo17: '4.57e-11' χ2 p-value for Mo17 x B73: '8.52e-29' Biased in favor of strain: 'B73'
GRMZM2G099989	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.3 x 10^-12	171	51	132	40	77.03%	23.26%	222	172	RefGen V2	χ2 p-value for B73 x Mo17: '8.02e-16' χ2 p-value for Mo17 x B73: '2.30e-12' Biased in favor of strain: 'B73'
GRMZM2G099987	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.359238 x 10^-1	62	34	59	49	64.58%	45.37%	96	108	RefGen V2	χ2 p-value for B73 x Mo17: '.0042667' χ2 p-value for Mo17 x B73: '.3359238' Biased in favor of strain: ''
GRMZM2G099987	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.23253 x 10^-1	45	17	35	28	72.58%	44.44%	62	63	RefGen V2	χ2 p-value for B73 x Mo17: '.323253' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: ''
GRMZM2G099984	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0 x 10^-30	267	0	70	0	100.00%	0.00%	267	70	RefGen V2	χ2 p-value for B73 x Mo17: '7.03e-31' χ2 p-value for Mo17 x B73: '2.66e-32' Biased in favor of strain: 'B73'
GRMZM2G099984	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.25094 x 10^-2	11	3	14	0	78.57%	0.00%	14	14	RefGen V2	χ2 p-value for B73 x Mo17: '.0325094' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: 'B73'
GRMZM2G099960	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	7.891 x 10^-4	20	0	1	14	100.00%	93.33%	20	15	RefGen V2	χ2 p-value for B73 x Mo17: '7.74e-06' χ2 p-value for Mo17 x B73: '.0007891' Biased in favor of strain: ''
GRMZM2G099960	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	1.43059 x 10^-2	39	0	0	12	100.00%	100.00%	39	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0000101' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G099944	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	3	9	0.00%	75.00%	2	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.5402915' Biased in favor of strain: ''
GRMZM2G099944	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.279 x 10^-3	42	16	37	14	72.41%	27.45%	58	51	RefGen V2	χ2 p-value for B73 x Mo17: '.0006402' χ2 p-value for Mo17 x B73: '.001279' Biased in favor of strain: 'B73'
GRMZM2G099909	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.05689 x 10^-2	179	132	117	90	57.56%	43.48%	311	207	RefGen V2	χ2 p-value for B73 x Mo17: '.007696' χ2 p-value for Mo17 x B73: '.0605689' Biased in favor of strain: ''
GRMZM2G099909	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.421291 x 10^-1	63	32	66	38	66.32%	36.54%	95	104	RefGen V2	χ2 p-value for B73 x Mo17: '.9421291' χ2 p-value for Mo17 x B73: '7.14e-11' Biased in favor of strain: ''
GRMZM2G099907	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.025556 x 10^-1	47	25	15	42	65.28%	73.68%	72	57	RefGen V2	χ2 p-value for B73 x Mo17: '.8025556' χ2 p-value for Mo17 x B73: '.2610543' Biased in favor of strain: ''
GRMZM2G099907	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.158656 x 10^-1	35	18	45	34	66.04%	43.04%	53	79	RefGen V2	χ2 p-value for B73 x Mo17: '.0195367' χ2 p-value for Mo17 x B73: '.2158656' Biased in favor of strain: ''
GRMZM2G099891	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.1 x 10^-19	1079	553	875	538	66.12%	38.08%	1632	1413	RefGen V2	χ2 p-value for B73 x Mo17: '9.36e-39' χ2 p-value for Mo17 x B73: '3.10e-19' Biased in favor of strain: 'B73'
GRMZM2G099891	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.39 x 10^-11	299	60	146	109	83.29%	42.75%	359	255	RefGen V2	χ2 p-value for B73 x Mo17: '2.39e-11' χ2 p-value for Mo17 x B73: '5.35e-16' Biased in favor of strain: 'B73'
GRMZM2G099862	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	1	1	100.00%	50.00%	4	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: ''
GRMZM2G099862	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.183 x 10^-3	49	23	36	13	68.06%	26.53%	72	49	RefGen V2	χ2 p-value for B73 x Mo17: '.002183' χ2 p-value for Mo17 x B73: '.0010172' Biased in favor of strain: 'B73'
GRMZM2G099860	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.063567 x 10^-1	1216	1129	1286	1260	51.86%	49.49%	2345	2546	RefGen V2	χ2 p-value for B73 x Mo17: '.0724015' χ2 p-value for Mo17 x B73: '.6063567' Biased in favor of strain: ''
GRMZM2G099860	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.0505 x 10^-3	694	279	343	507	71.33%	59.65%	973	850	RefGen V2	χ2 p-value for B73 x Mo17: '.0020505' χ2 p-value for Mo17 x B73: '.0000142' Biased in favor of strain: 'B73'
GRMZM2G099820	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G099820	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.33 x 10^-5	30	70	18	87	30.00%	82.86%	100	105	RefGen V2	χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '1.65e-11' Biased in favor of strain: 'Mo17'
GRMZM2G099802	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	807	308	749	310	72.38%	29.27%	1115	1059	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G099802	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	2	5	15	75.00%	75.00%	8	20	RefGen V2	χ2 p-value for B73 x Mo17: '.6170834' χ2 p-value for Mo17 x B73: '.4291954' Biased in favor of strain: ''
GRMZM2G099797	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.019838 x 10^-1	279	134	189	203	67.55%	51.79%	413	392	RefGen V2	χ2 p-value for B73 x Mo17: '.7019838' χ2 p-value for Mo17 x B73: '4.10e-10' Biased in favor of strain: ''
GRMZM2G099797	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.56564 x 10^-2	188	130	172	130	59.12%	43.05%	318	302	RefGen V2	χ2 p-value for B73 x Mo17: '.001144' χ2 p-value for Mo17 x B73: '.0156564' Biased in favor of strain: 'B73'
GRMZM2G099780	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.3224 x 10^-3	22	6	19	6	78.57%	24.00%	28	25	RefGen V2	χ2 p-value for B73 x Mo17: '.0024969' χ2 p-value for Mo17 x B73: '.0093224' Biased in favor of strain: 'B73'
GRMZM2G099780	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.01 x 10^-5	39	0	23	0	100.00%	0.00%	39	23	RefGen V2	χ2 p-value for B73 x Mo17: '.0000101' χ2 p-value for Mo17 x B73: '1.18e-11' Biased in favor of strain: 'B73'
GRMZM2G099765	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G099765	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	0	2	0	100.00%	0.00%	6	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G099754	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1148	410	1158	510	73.68%	30.58%	1558	1668	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G099754	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	maternally biased	5.54 x 10^-25	1178	247	287	1122	82.67%	79.63%	1425	1409	RefGen V2	χ2 p-value for B73 x Mo17: '1.40e-37' χ2 p-value for Mo17 x B73: '5.54e-25' Biased in favor of strain: ''
GRMZM2G099745	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.605775 x 10^-1	2004	1206	1090	2184	62.43%	66.71%	3210	3274	RefGen V2	χ2 p-value for B73 x Mo17: '3.54e-07' χ2 p-value for Mo17 x B73: '.9605775' Biased in favor of strain: ''
GRMZM2G099745	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.258253 x 10^-1	458	439	316	415	51.06%	56.77%	897	731	RefGen V2	χ2 p-value for B73 x Mo17: '.5258253' χ2 p-value for Mo17 x B73: '.0002506' Biased in favor of strain: ''
GRMZM2G099729	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.1477 x 10^-3	136	62	94	60	68.69%	38.96%	198	154	RefGen V2	χ2 p-value for B73 x Mo17: '1.45e-07' χ2 p-value for Mo17 x B73: '.0061477' Biased in favor of strain: 'B73'
GRMZM2G099729	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.127 x 10^-4	9	20	4	47	31.03%	92.16%	29	51	RefGen V2	χ2 p-value for B73 x Mo17: '.0000469' χ2 p-value for Mo17 x B73: '.0001127' Biased in favor of strain: 'Mo17'
GRMZM2G099696	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.37937 x 10^-2	285	84	158	246	77.24%	60.89%	369	404	RefGen V2	χ2 p-value for B73 x Mo17: '.0000166' χ2 p-value for Mo17 x B73: '.0137937' Biased in favor of strain: ''
GRMZM2G099696	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.5 x 10^-8	1469	1166	1204	953	55.75%	44.18%	2635	2157	RefGen V2	χ2 p-value for B73 x Mo17: '3.58e-09' χ2 p-value for Mo17 x B73: '6.50e-08' Biased in favor of strain: 'B73'
GRMZM2G099666	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.6777 x 10^-3	43	13	48	24	76.79%	33.33%	56	72	RefGen V2	χ2 p-value for B73 x Mo17: '.000061' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: 'B73'
GRMZM2G099666	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.893 x 10^-4	238	23	49	51	91.19%	51.00%	261	100	RefGen V2	χ2 p-value for B73 x Mo17: '4.33e-17' χ2 p-value for Mo17 x B73: '.0008893' Biased in favor of strain: 'B73'
GRMZM2G099657	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G099657	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	0	4	0	100.00%	0.00%	7	4	RefGen V2	χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''

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