| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM5G816289 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.160316 x 10-1 | 67 | 50 | 98 | 73 | 57.26% | 42.69% | 117 | 171 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1160316' χ2 p-value for Mo17 x B73: '.0559021' Biased in favor of strain: '' |
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| GRMZM5G816289 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G816228 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.79 x 10-10 | 987 | 306 | 558 | 795 | 76.33% | 58.76% | 1293 | 1353 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.65e-13' χ2 p-value for Mo17 x B73: '6.79e-10' Biased in favor of strain: 'B73' |
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| GRMZM5G816228 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.07 x 10-23 | 1155 | 671 | 1048 | 640 | 63.25% | 37.91% | 1826 | 1688 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.70e-30' χ2 p-value for Mo17 x B73: '3.07e-23' Biased in favor of strain: 'B73' |
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| GRMZM5G816110 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.5 x 10-29 | 360 | 88 | 347 | 109 | 80.36% | 23.90% | 448 | 456 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.51e-38' χ2 p-value for Mo17 x B73: '7.54e-29' Biased in favor of strain: 'B73' |
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| GRMZM5G816110 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.555445 x 10-1 | 164 | 100 | 139 | 257 | 62.12% | 64.90% | 264 | 396 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1171659' χ2 p-value for Mo17 x B73: '.4555445' Biased in favor of strain: '' |
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| GRMZM5G816015 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 2 | 3 | 24 | 71.43% | 88.89% | 7 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.789277' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM5G816015 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 17 | 5 | 1 | 2 | 77.27% | 66.67% | 22 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0105152' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM5G815894 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.821 x 10-4 | 3260 | 2674 | 2622 | 2371 | 54.94% | 47.49% | 5934 | 4993 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.80e-14' χ2 p-value for Mo17 x B73: '.0003821' Biased in favor of strain: 'B73' |
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| GRMZM5G815894 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.977611 x 10-1 | 4464 | 2172 | 3067 | 6572 | 67.27% | 68.18% | 6636 | 9639 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2977611' χ2 p-value for Mo17 x B73: '.0016073' Biased in favor of strain: '' |
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| GRMZM5G815839 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.8232 x 10-3 | 152 | 163 | 98 | 275 | 48.25% | 73.73% | 315 | 373 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.14e-12' χ2 p-value for Mo17 x B73: '.0038232' Biased in favor of strain: 'Mo17' |
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| GRMZM5G815839 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.394761 x 10-1 | 355 | 330 | 326 | 281 | 51.82% | 46.29% | 685 | 607 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3394761' χ2 p-value for Mo17 x B73: '.0677759' Biased in favor of strain: '' |
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| GRMZM5G815808 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 2 | 11 | 6 | 75.00% | 35.29% | 8 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.2252529' Biased in favor of strain: '' |
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| GRMZM5G815808 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 0 | 0 | 50.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G815768 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 4 | 100.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G815768 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 12 | 12 | 14 | 7 | 50.00% | 33.33% | 24 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1266305' Biased in favor of strain: '' |
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| GRMZM5G815715 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G815715 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 11 | 0 | 0 | 0 | 100.00% | 11 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G815369 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.567847 x 10-1 | 1183 | 172 | 263 | 503 | 87.31% | 65.67% | 1355 | 766 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.5567847' Biased in favor of strain: '' |
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| GRMZM5G815369 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.16 x 10-5 | 516 | 186 | 275 | 184 | 73.50% | 40.09% | 702 | 459 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.31e-35' χ2 p-value for Mo17 x B73: '.0000216' Biased in favor of strain: 'B73' |
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| GRMZM5G815358 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.51 x 10-8 | 226 | 84 | 131 | 55 | 72.90% | 29.57% | 310 | 186 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.32e-16' χ2 p-value for Mo17 x B73: '2.51e-08' Biased in favor of strain: 'B73' |
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| GRMZM5G815358 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.2 x 10-8 | 1107 | 406 | 700 | 625 | 73.17% | 47.17% | 1513 | 1325 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.20e-08' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G815353 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 2 | 0 | 100.00% | 0.00% | 4 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM5G815353 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 3 | 0 | 100.00% | 0.00% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM5G815323 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.49 x 10-9 | 412 | 259 | 363 | 213 | 61.40% | 36.98% | 671 | 576 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.49e-09' χ2 p-value for Mo17 x B73: '4.10e-10' Biased in favor of strain: 'B73' |
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| GRMZM5G815323 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999748 x 10-1 | 20 | 10 | 15 | 45 | 66.67% | 75.00% | 30 | 60 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999748' χ2 p-value for Mo17 x B73: '.1709036' Biased in favor of strain: '' |
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| GRMZM5G815165 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.21 x 10-8 | 89 | 7 | 62 | 13 | 92.71% | 17.33% | 96 | 75 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.21e-08' χ2 p-value for Mo17 x B73: '1.27e-19' Biased in favor of strain: 'B73' |
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| GRMZM5G815165 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.719 x 10-4 | 128 | 68 | 99 | 57 | 65.31% | 36.54% | 196 | 156 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000182' χ2 p-value for Mo17 x B73: '.0007719' Biased in favor of strain: 'B73' |
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| GRMZM5G815154 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 5 | 7 | 66.67% | 58.33% | 3 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM5G815154 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.0548 x 10-3 | 19 | 0 | 15 | 5 | 100.00% | 25.00% | 19 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0020548' χ2 p-value for Mo17 x B73: '.0000772' Biased in favor of strain: 'B73' |
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| GRMZM5G815032 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.09545 x 10-2 | 253 | 96 | 146 | 216 | 72.49% | 59.67% | 349 | 362 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0209545' χ2 p-value for Mo17 x B73: '.0047352' Biased in favor of strain: '' |
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| GRMZM5G815032 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5268 x 10-3 | 144 | 95 | 161 | 106 | 60.25% | 39.70% | 239 | 267 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015268' χ2 p-value for Mo17 x B73: '.0007628' Biased in favor of strain: 'B73' |
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| GRMZM5G815009 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1912 | 600 | 1672 | 372 | 76.11% | 18.20% | 2512 | 2044 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G815009 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 942 | 178 | 534 | 339 | 84.11% | 38.83% | 1120 | 873 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.30e-35' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G814981 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 0 | 1 | 1 | 100.00% | 50.00% | 10 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| GRMZM5G814981 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 2 | 1 | 83.33% | 33.33% | 6 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM5G814945 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.587953 x 10-1 | 34 | 49 | 34 | 42 | 40.96% | 55.26% | 83 | 76 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0996683' χ2 p-value for Mo17 x B73: '.3587953' Biased in favor of strain: '' |
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| GRMZM5G814945 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.124552 x 10-1 | 63 | 29 | 56 | 68 | 68.48% | 54.84% | 92 | 124 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7124552' χ2 p-value for Mo17 x B73: '.005206' Biased in favor of strain: '' |
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| GRMZM5G814913 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 1.5655 x 10-3 | 20 | 0 | 1 | 29 | 100.00% | 96.67% | 20 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015655' χ2 p-value for Mo17 x B73: '.0004909' Biased in favor of strain: '' |
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| GRMZM5G814913 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 1 | 6 | 100.00% | 85.71% | 4 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: '' |
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| GRMZM5G814851 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.835111 x 10-1 | 522 | 349 | 424 | 399 | 59.93% | 48.48% | 871 | 823 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.58e-09' χ2 p-value for Mo17 x B73: '.3835111' Biased in favor of strain: '' |
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| GRMZM5G814851 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.26001 x 10-2 | 844 | 372 | 809 | 1067 | 69.41% | 56.88% | 1216 | 1876 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0426001' χ2 p-value for Mo17 x B73: '2.35e-19' Biased in favor of strain: '' |
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| GRMZM5G814718 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G814718 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 8 | 2 | 6 | 27.27% | 75.00% | 11 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.131668' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G814549 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 27 | 41 | 30 | 30 | 39.71% | 50.00% | 68 | 60 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0895551' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM5G814549 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999998 x 10-1 | 21 | 6 | 6 | 12 | 77.78% | 66.67% | 27 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206791' χ2 p-value for Mo17 x B73: '.9999998' Biased in favor of strain: '' |
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| GRMZM5G814441 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 5 | 8 | 17 | 0.00% | 68.00% | 5 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015653' χ2 p-value for Mo17 x B73: '.8875373' Biased in favor of strain: '' |
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| GRMZM5G814441 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.08556 x 10-2 | 50 | 34 | 60 | 23 | 59.52% | 27.71% | 84 | 83 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0808556' χ2 p-value for Mo17 x B73: '.0000488' Biased in favor of strain: '' |
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| GRMZM5G814314 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.0838 x 10-2 | 88 | 118 | 104 | 81 | 42.72% | 43.78% | 206 | 185 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0365999' χ2 p-value for Mo17 x B73: '.090838' Biased in favor of strain: '' |
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| GRMZM5G814314 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.292061 x 10-1 | 15 | 5 | 19 | 7 | 75.00% | 26.92% | 20 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4292061' χ2 p-value for Mo17 x B73: '.0000172' Biased in favor of strain: '' |
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| GRMZM5G814310 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.373875 x 10-1 | 2854 | 1482 | 1509 | 3394 | 65.82% | 69.22% | 4336 | 4903 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2373875' χ2 p-value for Mo17 x B73: '.0001465' Biased in favor of strain: '' |
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| GRMZM5G814310 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.33 x 10-5 | 755 | 595 | 599 | 796 | 55.93% | 57.06% | 1350 | 1395 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000133' χ2 p-value for Mo17 x B73: '1.33e-07' Biased in favor of strain: '' |
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| GRMZM5G814279 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.7144 x 10-3 | 18 | 5 | 26 | 4 | 78.26% | 13.33% | 23 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0067144' χ2 p-value for Mo17 x B73: '.000059' Biased in favor of strain: 'B73' |
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| GRMZM5G814279 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 1.33 x 10-9 | 6 | 28 | 30 | 0 | 17.65% | 0.00% | 34 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.33e-09' χ2 p-value for Mo17 x B73: '9.49e-15' Biased in favor of strain: '' |
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| GRMZM5G814164 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999998 x 10-1 | 34 | 12 | 10 | 20 | 73.91% | 66.67% | 46 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2971598' χ2 p-value for Mo17 x B73: '.9999998' Biased in favor of strain: '' |
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| GRMZM5G814164 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 15 | 4 | 5 | 28.57% | 55.56% | 21 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0495346' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: '' |
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| GRMZM5G814159 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.860995 x 10-1 | 54 | 47 | 50 | 64 | 53.47% | 56.14% | 101 | 114 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4860995' χ2 p-value for Mo17 x B73: '.1897834' Biased in favor of strain: '' |
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| GRMZM5G814159 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.025869 x 10-1 | 62 | 29 | 44 | 84 | 68.13% | 65.62% | 91 | 128 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7668822' χ2 p-value for Mo17 x B73: '.8025869' Biased in favor of strain: '' |
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| GRMZM5G814089 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 4 | 0.00% | 100.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G814089 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 1 | 3 | 0.00% | 75.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G814035 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.861678 x 10-1 | 200 | 192 | 141 | 153 | 51.02% | 52.04% | 392 | 294 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6861678' χ2 p-value for Mo17 x B73: '.4840184' Biased in favor of strain: '' |
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| GRMZM5G814035 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.589916 x 10-1 | 385 | 212 | 152 | 221 | 64.49% | 59.25% | 597 | 373 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2589916' χ2 p-value for Mo17 x B73: '.0023749' Biased in favor of strain: '' |
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| GRMZM5G813909 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.214441 x 10-1 | 294 | 126 | 158 | 323 | 70.00% | 67.15% | 420 | 481 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1473249' χ2 p-value for Mo17 x B73: '.8214441' Biased in favor of strain: '' |
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| GRMZM5G813909 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.9211 x 10-2 | 269 | 319 | 241 | 301 | 45.75% | 55.54% | 588 | 542 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.039211' χ2 p-value for Mo17 x B73: '.0099598' Biased in favor of strain: 'Mo17' |
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| GRMZM5G813886 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 565 | 178 | 672 | 259 | 76.04% | 27.82% | 743 | 931 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G813886 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.03 x 10-14 | 318 | 46 | 135 | 105 | 87.36% | 43.75% | 364 | 240 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.47e-17' χ2 p-value for Mo17 x B73: '5.03e-14' Biased in favor of strain: 'B73' |
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| GRMZM5G813670 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.04 x 10-8 | 7 | 26 | 0 | 73 | 21.21% | 100.00% | 33 | 73 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.04e-08' χ2 p-value for Mo17 x B73: '1.53e-09' Biased in favor of strain: 'Mo17' |
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| GRMZM5G813670 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.679208 x 10-1 | 50 | 43 | 60 | 46 | 53.76% | 43.40% | 93 | 106 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4679208' χ2 p-value for Mo17 x B73: '.1738932' Biased in favor of strain: '' |
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| GRMZM5G813661 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.61195 x 10-2 | 46 | 64 | 36 | 10 | 41.82% | 21.74% | 110 | 46 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0861195' χ2 p-value for Mo17 x B73: '.0001263' Biased in favor of strain: '' |
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| GRMZM5G813661 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G813651 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G813651 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 9 | 8 | 7 | 7 | 52.94% | 50.00% | 17 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8083652' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM5G813627 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1246 | 583 | 1043 | 509 | 68.12% | 32.80% | 1829 | 1552 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G813627 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.006 x 10-4 | 939 | 370 | 488 | 718 | 71.73% | 59.54% | 1309 | 1206 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001006' χ2 p-value for Mo17 x B73: '1.49e-07' Biased in favor of strain: 'B73' |
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| GRMZM5G813584 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 2 | 0.00% | 100.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G813584 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 4 | 2 | 1 | 50.00% | 33.33% | 8 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM5G813343 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 7 | 7 | 6 | 7 | 50.00% | 53.85% | 14 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.7815113' Biased in favor of strain: '' |
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| GRMZM5G813343 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G813302 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | maternally biased | 6.876 x 10-4 | 57 | 9 | 0 | 24 | 86.36% | 100.00% | 66 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006876' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: '' |
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| GRMZM5G813302 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.03 x 10-8 | 8 | 48 | 0 | 37 | 14.29% | 100.00% | 56 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.03e-08' χ2 p-value for Mo17 x B73: '1.18e-09' Biased in favor of strain: 'Mo17' |
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| GRMZM5G813217 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 4022 | 2744 | 3543 | 2612 | 59.44% | 42.44% | 6766 | 6155 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.76e-32' Biased in favor of strain: 'B73' |
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| GRMZM5G813217 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.72055 x 10-2 | 5974 | 3974 | 2408 | 4591 | 60.05% | 65.60% | 9948 | 6999 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.0572055' Biased in favor of strain: '' |
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| GRMZM5G813206 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.4436 x 10-2 | 257 | 96 | 161 | 213 | 72.80% | 56.95% | 353 | 374 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.014436' χ2 p-value for Mo17 x B73: '.0000674' Biased in favor of strain: '' |
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| GRMZM5G813206 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.18815 x 10-2 | 399 | 236 | 231 | 180 | 62.83% | 43.80% | 635 | 411 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.90e-11' χ2 p-value for Mo17 x B73: '.0118815' Biased in favor of strain: 'B73' |
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| GRMZM5G813143 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 285 | 0 | 298 | 9 | 100.00% | 2.93% | 285 | 307 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G813143 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 8 | 0 | 100.00% | 0.00% | 3 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: '' |
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| GRMZM5G813111 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.291319 x 10-1 | 325 | 175 | 194 | 300 | 65.00% | 60.73% | 500 | 494 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4291319' χ2 p-value for Mo17 x B73: '.0051157' Biased in favor of strain: '' |
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| GRMZM5G813111 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.182695 x 10-1 | 249 | 219 | 285 | 266 | 53.21% | 48.28% | 468 | 551 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1655179' χ2 p-value for Mo17 x B73: '.4182695' Biased in favor of strain: '' |
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| GRMZM5G813092 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.270892 x 10-1 | 8 | 5 | 6 | 4 | 61.54% | 40.00% | 13 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4053805' χ2 p-value for Mo17 x B73: '.5270892' Biased in favor of strain: '' |
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| GRMZM5G813092 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 4 | 1 | 83.33% | 20.00% | 6 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.0268567' Biased in favor of strain: '' |
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| GRMZM5G813055 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.8772 x 10-3 | 42 | 3 | 25 | 22 | 93.33% | 46.81% | 45 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001478' χ2 p-value for Mo17 x B73: '.0038772' Biased in favor of strain: 'B73' |
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| GRMZM5G813055 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.35 x 10-7 | 124 | 24 | 83 | 29 | 83.78% | 25.89% | 148 | 112 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.04e-16' χ2 p-value for Mo17 x B73: '3.35e-07' Biased in favor of strain: 'B73' |
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| GRMZM5G812926 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.0 x 10-10 | 304 | 143 | 252 | 128 | 68.01% | 33.68% | 447 | 380 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.64e-14' χ2 p-value for Mo17 x B73: '2.00e-10' Biased in favor of strain: 'B73' |
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| GRMZM5G812926 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 3 | 4 | 5 | 76.92% | 55.56% | 13 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4327761' χ2 p-value for Mo17 x B73: '.4795' Biased in favor of strain: '' |
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| GRMZM5G812921 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.25 x 10-10 | 605 | 157 | 275 | 336 | 79.40% | 54.99% | 762 | 611 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.05e-14' χ2 p-value for Mo17 x B73: '9.25e-10' Biased in favor of strain: 'B73' |
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| GRMZM5G812921 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.4 x 10-6 | 503 | 291 | 465 | 338 | 63.35% | 42.09% | 794 | 803 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.33e-14' χ2 p-value for Mo17 x B73: '7.40e-06' Biased in favor of strain: 'B73' |
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| GRMZM5G812860 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 2 | 4 | 4 | 75.00% | 50.00% | 8 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM5G812860 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.270891 x 10-1 | 11 | 10 | 8 | 12 | 52.38% | 60.00% | 21 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1649068' χ2 p-value for Mo17 x B73: '.5270891' Biased in favor of strain: '' |
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| GRMZM5G812660 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.498056 x 10-1 | 111 | 134 | 57 | 120 | 45.31% | 67.80% | 245 | 177 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.32e-12' χ2 p-value for Mo17 x B73: '.7498056' Biased in favor of strain: '' |
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| GRMZM5G812660 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.013206 x 10-1 | 80 | 97 | 65 | 88 | 45.20% | 57.52% | 177 | 153 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2013206' χ2 p-value for Mo17 x B73: '.0629648' Biased in favor of strain: '' |