GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G104955	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.463552 x 10^-1	66	51	40	36	56.41%	47.37%	117	76	RefGen V2	χ2 p-value for B73 x Mo17: '.1655179' χ2 p-value for Mo17 x B73: '.6463552' Biased in favor of strain: ''
GRMZM2G104955	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.83655 x 10^-2	168	65	84	131	72.10%	60.93%	233	215	RefGen V2	χ2 p-value for B73 x Mo17: '.0783655' χ2 p-value for Mo17 x B73: '.0743751' Biased in favor of strain: ''
GRMZM2G104942	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.2 x 10^-5	870	333	420	611	72.32%	59.26%	1203	1031	RefGen V2	χ2 p-value for B73 x Mo17: '.000032' χ2 p-value for Mo17 x B73: '4.58e-07' Biased in favor of strain: 'B73'
GRMZM2G104942	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.688478 x 10^-1	479	449	695	706	51.62%	50.39%	928	1401	RefGen V2	χ2 p-value for B73 x Mo17: '.3247232' χ2 p-value for Mo17 x B73: '.7688478' Biased in favor of strain: ''
GRMZM2G104938	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.787937 x 10^-1	10	11	22	21	47.62%	48.84%	21	43	RefGen V2	χ2 p-value for B73 x Mo17: '.8272594' χ2 p-value for Mo17 x B73: '.8787937' Biased in favor of strain: ''
GRMZM2G104938	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.937584 x 10^-1	6	5	8	6	54.55%	42.86%	11	14	RefGen V2	χ2 p-value for B73 x Mo17: '.3937584' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: ''
GRMZM2G104925	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		12	5	1	3	70.59%	75.00%	17	4	RefGen V2	χ2 p-value for B73 x Mo17: '.7316144' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: ''
GRMZM2G104925	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.110798 x 10^-1	25	16	16	21	60.98%	56.76%	41	37	RefGen V2	χ2 p-value for B73 x Mo17: '.1598537' χ2 p-value for Mo17 x B73: '.4110798' Biased in favor of strain: ''
GRMZM2G104920	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.684194 x 10^-1	83	95	74	88	46.63%	54.32%	178	162	RefGen V2	χ2 p-value for B73 x Mo17: '.3684194' χ2 p-value for Mo17 x B73: '.2713566' Biased in favor of strain: ''
GRMZM2G104920	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.934864 x 10^-1	55	31	22	60	63.95%	73.17%	86	82	RefGen V2	χ2 p-value for B73 x Mo17: '.5934864' χ2 p-value for Mo17 x B73: '.2115226' Biased in favor of strain: ''
GRMZM2G104918	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.069996 x 10^-1	1687	820	1035	1646	67.29%	61.40%	2507	2681	RefGen V2	χ2 p-value for B73 x Mo17: '.5069996' χ2 p-value for Mo17 x B73: '7.03e-09' Biased in favor of strain: ''
GRMZM2G104918	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.6047 x 10^-3	895	1027	784	1280	46.57%	62.02%	1922	2064	RefGen V2	χ2 p-value for B73 x Mo17: '.0026047' χ2 p-value for Mo17 x B73: '9.50e-28' Biased in favor of strain: 'Mo17'
GRMZM2G104907	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		13	1	7	1	92.86%	12.50%	14	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0013406' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: ''
GRMZM2G104907	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	4	2	0	20.00%	0.00%	5	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0268555' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G104882	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		13	6	5	4	68.42%	44.44%	19	9	RefGen V2	χ2 p-value for B73 x Mo17: '.8711473' χ2 p-value for Mo17 x B73: '.1572991' Biased in favor of strain: ''
GRMZM2G104882	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.93464 x 10^-2	31	4	13	5	88.57%	27.78%	35	18	RefGen V2	χ2 p-value for B73 x Mo17: '5.02e-06' χ2 p-value for Mo17 x B73: '.0593464' Biased in favor of strain: ''
GRMZM2G104876	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.616799 x 10^-1	91	97	78	108	48.40%	58.06%	188	186	RefGen V2	χ2 p-value for B73 x Mo17: '.6616799' χ2 p-value for Mo17 x B73: '.0278277' Biased in favor of strain: ''
GRMZM2G104876	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	5	1	50.00%	16.67%	4	6	RefGen V2	χ2 p-value for B73 x Mo17: '.4794928' χ2 p-value for Mo17 x B73: '.0093748' Biased in favor of strain: ''
GRMZM2G104866	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	6.28 x 10^-20	30	84	327	41	26.32%	11.14%	114	368	RefGen V2	χ2 p-value for B73 x Mo17: '6.28e-20' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G104866	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.14 x 10^-6	4	34	64	13	10.53%	16.88%	38	77	RefGen V2	χ2 p-value for B73 x Mo17: '1.14e-06' χ2 p-value for Mo17 x B73: '6.17e-09' Biased in favor of strain: ''
GRMZM2G104854	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.815113 x 10^-1	3	17	7	6	15.00%	46.15%	20	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0017451' χ2 p-value for Mo17 x B73: '.7815113' Biased in favor of strain: ''
GRMZM2G104854	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	0	0	50.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G104847	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G104847	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	4	1	100.00%	20.00%	4	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G104843	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.98 x 10^-18	331	123	231	79	72.91%	25.48%	454	310	RefGen V2	χ2 p-value for B73 x Mo17: '1.64e-22' χ2 p-value for Mo17 x B73: '5.98e-18' Biased in favor of strain: 'B73'
GRMZM2G104843	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.698155 x 10^-1	16	1	3	8	94.12%	72.73%	17	11	RefGen V2	χ2 p-value for B73 x Mo17: '.0163517' χ2 p-value for Mo17 x B73: '.6698155' Biased in favor of strain: ''
GRMZM2G104829	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.21 x 10^-24	327	18	117	49	94.78%	29.52%	345	166	RefGen V2	χ2 p-value for B73 x Mo17: '1.60e-28' χ2 p-value for Mo17 x B73: '3.21e-24' Biased in favor of strain: 'B73'
GRMZM2G104829	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.672575 x 10^-1	48	18	22	30	72.73%	57.69%	66	52	RefGen V2	χ2 p-value for B73 x Mo17: '.0002218' χ2 p-value for Mo17 x B73: '.2672575' Biased in favor of strain: ''
GRMZM2G104795	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.538369 x 10^-1	121	27	32	25	81.76%	43.86%	148	57	RefGen V2	χ2 p-value for B73 x Mo17: '1.10e-14' χ2 p-value for Mo17 x B73: '.3538369' Biased in favor of strain: ''
GRMZM2G104795	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0 x 10^-30	1063	237	563	331	81.77%	37.02%	1300	894	RefGen V2	χ2 p-value for B73 x Mo17: '7.29e-31' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G104789	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		15	0	5	0	100.00%	0.00%	15	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0061701' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: ''
GRMZM2G104789	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173105 x 10^-1	28	21	45	30	57.14%	40.00%	49	75	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G104769	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.013266 x 10^-1	62	53	66	31	53.91%	31.96%	115	97	RefGen V2	χ2 p-value for B73 x Mo17: '.4013266' χ2 p-value for Mo17 x B73: '.0003798' Biased in favor of strain: ''
GRMZM2G104769	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.56 x 10^-5	256	77	121	151	76.88%	55.51%	333	272	RefGen V2	χ2 p-value for B73 x Mo17: '.0000774' χ2 p-value for Mo17 x B73: '.0000956' Biased in favor of strain: 'B73'
GRMZM2G104768	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	12	8	100.00%	40.00%	2	20	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.011412' Biased in favor of strain: ''
GRMZM2G104768	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.912971 x 10^-1	16	5	11	8	76.19%	42.11%	21	19	RefGen V2	χ2 p-value for B73 x Mo17: '.0163773' χ2 p-value for Mo17 x B73: '.4912971' Biased in favor of strain: ''
GRMZM2G104760	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.219611 x 10^-1	222	197	193	223	52.98%	53.61%	419	416	RefGen V2	χ2 p-value for B73 x Mo17: '.2219611' χ2 p-value for Mo17 x B73: '.141326' Biased in favor of strain: ''
GRMZM2G104760	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1630	279	730	455	85.39%	38.40%	1909	1185	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G104704	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.37522 x 10^-1	259	121	131	291	68.16%	68.96%	380	422	RefGen V2	χ2 p-value for B73 x Mo17: '.537522' χ2 p-value for Mo17 x B73: '.3181726' Biased in favor of strain: ''
GRMZM2G104704	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.006801 x 10^-1	206	174	149	195	54.21%	56.69%	380	344	RefGen V2	χ2 p-value for B73 x Mo17: '.1006801' χ2 p-value for Mo17 x B73: '.0131326' Biased in favor of strain: ''
GRMZM2G104676	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.598747 x 10^-1	177	102	130	123	63.44%	48.62%	279	253	RefGen V2	χ2 p-value for B73 x Mo17: '7.12e-06' χ2 p-value for Mo17 x B73: '.6598747' Biased in favor of strain: ''
GRMZM2G104676	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.3327 x 10^-3	173	53	66	86	76.55%	56.58%	226	152	RefGen V2	χ2 p-value for B73 x Mo17: '.0016252' χ2 p-value for Mo17 x B73: '.0083327' Biased in favor of strain: 'B73'
GRMZM2G104673	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.33 x 10^-5	32	0	14	0	100.00%	0.00%	32	14	RefGen V2	χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '1.21e-07' Biased in favor of strain: 'B73'
GRMZM2G104673	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.85 x 10^-14	63	2	76	0	96.92%	0.00%	65	76	RefGen V2	χ2 p-value for B73 x Mo17: '3.85e-14' χ2 p-value for Mo17 x B73: '2.84e-18' Biased in favor of strain: 'B73'
GRMZM2G104658	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.064 x 10^-4	96	47	85	44	67.13%	34.11%	143	129	RefGen V2	χ2 p-value for B73 x Mo17: '.0000417' χ2 p-value for Mo17 x B73: '.0003064' Biased in favor of strain: 'B73'
GRMZM2G104658	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.45017 x 10^-1	92	56	53	70	62.16%	56.91%	148	123	RefGen V2	χ2 p-value for B73 x Mo17: '.245017' χ2 p-value for Mo17 x B73: '.0217173' Biased in favor of strain: ''
GRMZM2G104649	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.113126 x 10^-1	372	190	131	286	66.19%	68.59%	562	417	RefGen V2	χ2 p-value for B73 x Mo17: '.8113126' χ2 p-value for Mo17 x B73: '.4059448' Biased in favor of strain: ''
GRMZM2G104649	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.211176 x 10^-1	411	360	247	242	53.31%	49.49%	771	489	RefGen V2	χ2 p-value for B73 x Mo17: '.0662512' χ2 p-value for Mo17 x B73: '.8211176' Biased in favor of strain: ''
GRMZM2G104639	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.25 x 10^-12	621	255	524	318	70.89%	37.77%	876	842	RefGen V2	χ2 p-value for B73 x Mo17: '3.99e-35' χ2 p-value for Mo17 x B73: '1.25e-12' Biased in favor of strain: 'B73'
GRMZM2G104639	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.985411 x 10^-1	138	76	119	211	64.49%	63.94%	214	330	RefGen V2	χ2 p-value for B73 x Mo17: '.4985411' χ2 p-value for Mo17 x B73: '.2932703' Biased in favor of strain: ''
GRMZM2G104632	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	0	100.00%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G104632	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	5	0	100.00%	0.00%	5	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM2G104626	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.797125 x 10^-1	53	18	13	7	74.65%	35.00%	71	20	RefGen V2	χ2 p-value for B73 x Mo17: '.0000327' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G104626	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.114968 x 10^-1	21	8	12	14	72.41%	53.85%	29	26	RefGen V2	χ2 p-value for B73 x Mo17: '.5114968' χ2 p-value for Mo17 x B73: '.1655178' Biased in favor of strain: ''
GRMZM2G104575	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.537 x 10^-4	65	12	38	19	84.42%	33.33%	77	57	RefGen V2	χ2 p-value for B73 x Mo17: '.0009537' χ2 p-value for Mo17 x B73: '9.37e-08' Biased in favor of strain: 'B73'
GRMZM2G104575	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.35 x 10^-4	116	49	81	44	70.30%	35.20%	165	125	RefGen V2	χ2 p-value for B73 x Mo17: '1.83e-07' χ2 p-value for Mo17 x B73: '.000935' Biased in favor of strain: 'B73'
GRMZM2G104551	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.034837 x 10^-1	20	14	23	15	58.82%	39.47%	34	38	RefGen V2	χ2 p-value for B73 x Mo17: '.3034837' χ2 p-value for Mo17 x B73: '.1943659' Biased in favor of strain: ''
GRMZM2G104551	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	4	1	6	42.86%	85.71%	7	7	RefGen V2	χ2 p-value for B73 x Mo17: '.1814437' χ2 p-value for Mo17 x B73: '.2850494' Biased in favor of strain: ''
GRMZM2G104546	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.711473 x 10^-1	13	6	8	4	68.42%	33.33%	19	12	RefGen V2	χ2 p-value for B73 x Mo17: '.8711473' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G104546	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	1	5	7	85.71%	58.33%	7	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0587817' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G104542	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.22 x 10^-5	57	22	5	55	72.15%	91.67%	79	60	RefGen V2	χ2 p-value for B73 x Mo17: '.0000822' χ2 p-value for Mo17 x B73: '1.08e-10' Biased in favor of strain: ''
GRMZM2G104542	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.64623 x 10^-2	120	24	19	70	83.33%	78.65%	144	89	RefGen V2	χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '.0164623' Biased in favor of strain: ''
GRMZM2G104538	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.17352 x 10^-2	539	223	203	331	70.73%	61.99%	762	534	RefGen V2	χ2 p-value for B73 x Mo17: '.0172122' χ2 p-value for Mo17 x B73: '.0217352' Biased in favor of strain: ''
GRMZM2G104538	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.72 x 10^-6	302	482	328	453	38.52%	58.00%	784	781	RefGen V2	χ2 p-value for B73 x Mo17: '1.29e-10' χ2 p-value for Mo17 x B73: '7.72e-06' Biased in favor of strain: 'Mo17'
GRMZM2G104511	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1209 x 10^-3	148	97	117	59	60.41%	33.52%	245	176	RefGen V2	χ2 p-value for B73 x Mo17: '.0011209' χ2 p-value for Mo17 x B73: '.0000123' Biased in favor of strain: 'B73'
GRMZM2G104511	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.82929 x 10^-2	143	52	93	51	73.33%	35.42%	195	144	RefGen V2	χ2 p-value for B73 x Mo17: '.0482929' χ2 p-value for Mo17 x B73: '1.79e-15' Biased in favor of strain: ''
GRMZM2G104505	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3134	573	1360	1095	84.54%	44.60%	3707	2455	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G104505	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.29 x 10^-21	1655	856	1390	930	65.91%	40.09%	2511	2320	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.29e-21' Biased in favor of strain: 'B73'
GRMZM2G104501	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.97 x 10^-9	137	45	157	68	75.27%	30.22%	182	225	RefGen V2	χ2 p-value for B73 x Mo17: '9.14e-12' χ2 p-value for Mo17 x B73: '2.97e-09' Biased in favor of strain: 'B73'
GRMZM2G104501	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.70218 x 10^-2	532	371	554	976	58.91%	63.79%	903	1530	RefGen V2	χ2 p-value for B73 x Mo17: '7.75e-07' χ2 p-value for Mo17 x B73: '.0170218' Biased in favor of strain: ''
GRMZM2G104494	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.385 x 10^-4	2	10	0	36	16.67%	100.00%	12	36	RefGen V2	χ2 p-value for B73 x Mo17: '.0002385' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: 'Mo17'
GRMZM2G104494	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	3	0	7	40.00%	100.00%	5	7	RefGen V2	χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: ''
GRMZM2G104481	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.383489 x 10^-1	323	343	299	379	48.50%	55.90%	666	678	RefGen V2	χ2 p-value for B73 x Mo17: '.4383489' χ2 p-value for Mo17 x B73: '.0021236' Biased in favor of strain: ''
GRMZM2G104481	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.741101 x 10^-1	353	159	259	367	68.95%	58.63%	512	626	RefGen V2	χ2 p-value for B73 x Mo17: '.2741101' χ2 p-value for Mo17 x B73: '.0000198' Biased in favor of strain: ''
GRMZM2G104468	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7 x 10^-22	219	6	176	21	97.33%	10.66%	225	197	RefGen V2	χ2 p-value for B73 x Mo17: '1.70e-22' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G104468	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.54 x 10^-10	262	128	317	175	67.18%	35.57%	390	492	RefGen V2	χ2 p-value for B73 x Mo17: '1.16e-11' χ2 p-value for Mo17 x B73: '1.54e-10' Biased in favor of strain: 'B73'
GRMZM2G104456	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.25 x 10^-6	201	85	138	72	70.28%	34.29%	286	210	RefGen V2	χ2 p-value for B73 x Mo17: '6.92e-12' χ2 p-value for Mo17 x B73: '5.25e-06' Biased in favor of strain: 'B73'
GRMZM2G104456	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.02301 x 10^-2	152	54	59	86	73.79%	59.31%	206	145	RefGen V2	χ2 p-value for B73 x Mo17: '.0301843' χ2 p-value for Mo17 x B73: '.0602301' Biased in favor of strain: ''
GRMZM2G104449	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.725457 x 10^-1	145	63	82	145	69.71%	63.88%	208	227	RefGen V2	χ2 p-value for B73 x Mo17: '.351602' χ2 p-value for Mo17 x B73: '.3725457' Biased in favor of strain: ''
GRMZM2G104449	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.630246 x 10^-1	99	78	86	90	55.93%	51.14%	177	176	RefGen V2	χ2 p-value for B73 x Mo17: '.1144607' χ2 p-value for Mo17 x B73: '.7630246' Biased in favor of strain: ''
GRMZM2G104443	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.136899 x 10^-1	370	240	214	248	60.66%	53.68%	610	462	RefGen V2	χ2 p-value for B73 x Mo17: '1.41e-07' χ2 p-value for Mo17 x B73: '.1136899' Biased in favor of strain: ''
GRMZM2G104443	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.74 x 10^-5	887	303	342	507	74.54%	59.72%	1190	849	RefGen V2	χ2 p-value for B73 x Mo17: '8.42e-09' χ2 p-value for Mo17 x B73: '.0000174' Biased in favor of strain: 'B73'
GRMZM2G104430	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.247429 x 10^-1	670	283	311	558	70.30%	64.21%	953	869	RefGen V2	χ2 p-value for B73 x Mo17: '.0172176' χ2 p-value for Mo17 x B73: '.1247429' Biased in favor of strain: ''
GRMZM2G104430	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.7969 x 10^-3	346	261	215	272	57.00%	55.85%	607	487	RefGen V2	χ2 p-value for B73 x Mo17: '.0005605' χ2 p-value for Mo17 x B73: '.0097969' Biased in favor of strain: ''
GRMZM2G104419	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.269 x 10^-4	349	81	229	154	81.16%	40.21%	430	383	RefGen V2	χ2 p-value for B73 x Mo17: '3.29e-38' χ2 p-value for Mo17 x B73: '.0001269' Biased in favor of strain: 'B73'
GRMZM2G104419	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	949	133	653	346	87.71%	34.63%	1082	999	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G104418	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.237104 x 10^-1	119	43	72	128	73.46%	64.00%	162	200	RefGen V2	χ2 p-value for B73 x Mo17: '.0667611' χ2 p-value for Mo17 x B73: '.4237104' Biased in favor of strain: ''
GRMZM2G104418	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.33659 x 10^-2	152	93	94	71	62.04%	43.03%	245	165	RefGen V2	χ2 p-value for B73 x Mo17: '.0001637' χ2 p-value for Mo17 x B73: '.0733659' Biased in favor of strain: ''
GRMZM2G104400	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.626247 x 10^-1	186	175	128	142	51.52%	52.59%	361	270	RefGen V2	χ2 p-value for B73 x Mo17: '.5626247' χ2 p-value for Mo17 x B73: '.3942069' Biased in favor of strain: ''
GRMZM2G104400	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.076558 x 10^-1	254	110	171	216	69.78%	55.81%	364	387	RefGen V2	χ2 p-value for B73 x Mo17: '.2076558' χ2 p-value for Mo17 x B73: '5.93e-06' Biased in favor of strain: ''
GRMZM2G104397	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0152 x 10^-3	108	27	55	22	80.00%	28.57%	135	77	RefGen V2	χ2 p-value for B73 x Mo17: '.0010152' χ2 p-value for Mo17 x B73: '1.33e-12' Biased in favor of strain: 'B73'
GRMZM2G104397	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.22097 x 10^-2	49	6	40	23	89.09%	36.51%	55	63	RefGen V2	χ2 p-value for B73 x Mo17: '6.71e-09' χ2 p-value for Mo17 x B73: '.0322097' Biased in favor of strain: 'B73'
GRMZM2G104394	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.158178 x 10^-1	178	180	174	190	49.72%	52.20%	358	364	RefGen V2	χ2 p-value for B73 x Mo17: '.9158178' χ2 p-value for Mo17 x B73: '.4016782' Biased in favor of strain: ''
GRMZM2G104394	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.852013 x 10^-1	249	119	120	120	67.66%	50.00%	368	240	RefGen V2	χ2 p-value for B73 x Mo17: '.6852013' χ2 p-value for Mo17 x B73: '4.32e-08' Biased in favor of strain: ''
GRMZM2G104384	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.5673 x 10^-2	131	40	121	192	76.61%	61.34%	171	313	RefGen V2	χ2 p-value for B73 x Mo17: '.0058208' χ2 p-value for Mo17 x B73: '.045673' Biased in favor of strain: ''
GRMZM2G104384	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5217 x 10^-3	295	211	264	196	58.30%	42.61%	506	460	RefGen V2	χ2 p-value for B73 x Mo17: '.0001883' χ2 p-value for Mo17 x B73: '.0015217' Biased in favor of strain: 'B73'
GRMZM2G104363	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G104363	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G104357	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	6986	1373	3510	2967	83.57%	45.81%	8359	6477	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G104357	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.67 x 10^-9	1244	525	644	449	70.32%	41.08%	1769	1093	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.67e-09' Biased in favor of strain: 'B73'

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