| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G107457 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.327761 x 10-1 | 10 | 3 | 8 | 6 | 76.92% | 42.86% | 13 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4327761' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: '' |
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| GRMZM2G107457 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.270892 x 10-1 | 4 | 6 | 13 | 21 | 40.00% | 61.76% | 10 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.170067' Biased in favor of strain: '' |
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| GRMZM2G107437 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.7276 x 10-3 | 100 | 53 | 69 | 38 | 65.36% | 35.51% | 153 | 107 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001449' χ2 p-value for Mo17 x B73: '.0027276' Biased in favor of strain: 'B73' |
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| GRMZM2G107437 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.311895 x 10-1 | 45 | 22 | 28 | 41 | 67.16% | 59.42% | 67 | 69 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9311895' χ2 p-value for Mo17 x B73: '.2016428' Biased in favor of strain: '' |
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| GRMZM2G107417 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 23 | 0 | 4 | 0 | 100.00% | 0.00% | 23 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000696' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G107417 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 8 | 0 | 100.00% | 0.00% | 9 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G107408 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.91 x 10-6 | 208 | 73 | 147 | 77 | 74.02% | 34.38% | 281 | 224 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.05e-16' χ2 p-value for Mo17 x B73: '2.91e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G107408 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.9 x 10-7 | 355 | 102 | 251 | 203 | 77.68% | 44.71% | 457 | 454 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.90e-07' χ2 p-value for Mo17 x B73: '3.32e-23' Biased in favor of strain: 'B73' |
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| GRMZM2G107406 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.18115 x 10-2 | 38 | 8 | 23 | 23 | 82.61% | 50.00% | 46 | 46 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0218115' χ2 p-value for Mo17 x B73: '.0164886' Biased in favor of strain: '' |
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| GRMZM2G107406 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.456101 x 10-1 | 35 | 22 | 40 | 28 | 61.40% | 41.18% | 57 | 68 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0850891' χ2 p-value for Mo17 x B73: '.1456101' Biased in favor of strain: '' |
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| GRMZM2G107380 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 9 | 0 | 4 | 0.00% | 100.00% | 9 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G107380 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G107373 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G107373 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 3 | 0 | 66.67% | 0.00% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G107362 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.10448 x 10-2 | 489 | 365 | 392 | 324 | 57.26% | 45.25% | 854 | 716 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000022' χ2 p-value for Mo17 x B73: '.0110448' Biased in favor of strain: 'B73' |
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| GRMZM2G107362 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.92415 x 10-2 | 183 | 71 | 96 | 154 | 72.05% | 61.60% | 254 | 250 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0689097' χ2 p-value for Mo17 x B73: '.0892415' Biased in favor of strain: '' |
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| GRMZM2G107336 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.9 x 10-18 | 345 | 51 | 241 | 125 | 87.12% | 34.15% | 396 | 366 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.90e-18' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G107336 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.33 x 10-18 | 352 | 121 | 355 | 156 | 74.42% | 30.53% | 473 | 511 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.37e-26' χ2 p-value for Mo17 x B73: '1.33e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G107322 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.13 x 10-5 | 158 | 54 | 146 | 80 | 74.53% | 35.40% | 212 | 226 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.15e-13' χ2 p-value for Mo17 x B73: '.0000113' Biased in favor of strain: 'B73' |
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| GRMZM2G107322 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 1 | 3 | 83.33% | 75.00% | 6 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: '' |
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| GRMZM2G107309 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.269731 x 10-1 | 98 | 39 | 96 | 85 | 71.53% | 46.96% | 137 | 181 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2269731' χ2 p-value for Mo17 x B73: '1.87e-08' Biased in favor of strain: '' |
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| GRMZM2G107309 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.961439 x 10-1 | 94 | 106 | 106 | 71 | 47.00% | 40.11% | 200 | 177 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3961439' χ2 p-value for Mo17 x B73: '.0085194' Biased in favor of strain: '' |
||||
| GRMZM2G107306 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.173105 x 10-1 | 6 | 10 | 7 | 22 | 37.50% | 75.86% | 16 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0053457' Biased in favor of strain: '' |
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| GRMZM2G107306 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 25 | 5 | 2 | 4 | 83.33% | 66.67% | 30 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0528099' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G107299 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 2 | 3 | 100.00% | 60.00% | 8 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.7518296' Biased in favor of strain: '' |
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| GRMZM2G107299 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 9 | 0 | 100.00% | 0.00% | 8 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| GRMZM2G107276 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 12 | 1 | 10 | 10 | 92.31% | 50.00% | 13 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0022819' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G107276 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 443 | 11 | 133 | 24 | 97.58% | 15.29% | 454 | 157 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G107205 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 5 | 0 | 100.00% | 0.00% | 3 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: '' |
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| GRMZM2G107205 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 2 | 3 | 0 | 66.67% | 0.00% | 6 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G107199 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.808365 x 10-1 | 240 | 128 | 363 | 387 | 65.22% | 51.60% | 368 | 750 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.27e-09' χ2 p-value for Mo17 x B73: '.3808365' Biased in favor of strain: '' |
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| GRMZM2G107199 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.78965 x 10-2 | 100 | 35 | 504 | 725 | 74.07% | 58.99% | 135 | 1229 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0678965' χ2 p-value for Mo17 x B73: '1.14e-08' Biased in favor of strain: '' |
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| GRMZM2G107196 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.430188 x 10-1 | 242 | 134 | 272 | 253 | 64.36% | 48.19% | 376 | 525 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3430188' χ2 p-value for Mo17 x B73: '2.70e-19' Biased in favor of strain: '' |
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| GRMZM2G107196 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.68 x 10-11 | 384 | 222 | 393 | 218 | 63.37% | 35.68% | 606 | 611 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.68e-11' χ2 p-value for Mo17 x B73: '1.44e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G107187 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.28909 x 10-2 | 70 | 38 | 45 | 29 | 64.81% | 39.19% | 108 | 74 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0020756' χ2 p-value for Mo17 x B73: '.0628909' Biased in favor of strain: '' |
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| GRMZM2G107187 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.444541 x 10-1 | 72 | 32 | 34 | 69 | 69.23% | 66.99% | 104 | 103 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5791315' χ2 p-value for Mo17 x B73: '.9444541' Biased in favor of strain: '' |
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| GRMZM2G107163 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.984561 x 10-1 | 95 | 60 | 55 | 130 | 61.29% | 70.27% | 155 | 185 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1556169' χ2 p-value for Mo17 x B73: '.2984561' Biased in favor of strain: '' |
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| GRMZM2G107163 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.744241 x 10-1 | 105 | 99 | 80 | 88 | 51.47% | 52.38% | 204 | 168 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6744241' χ2 p-value for Mo17 x B73: '.537094' Biased in favor of strain: '' |
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| GRMZM2G107142 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.990372 x 10-1 | 214 | 148 | 151 | 142 | 59.12% | 48.46% | 362 | 293 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005226' χ2 p-value for Mo17 x B73: '.5990372' Biased in favor of strain: '' |
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| GRMZM2G107142 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.195378 x 10-1 | 234 | 108 | 66 | 130 | 68.42% | 66.33% | 342 | 196 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4913509' χ2 p-value for Mo17 x B73: '.9195378' Biased in favor of strain: '' |
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| GRMZM2G107136 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.32 x 10-16 | 740 | 146 | 261 | 256 | 83.52% | 49.52% | 886 | 517 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.89e-26' χ2 p-value for Mo17 x B73: '1.32e-16' Biased in favor of strain: 'B73' |
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| GRMZM2G107136 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.78 x 10-6 | 469 | 203 | 289 | 185 | 69.79% | 39.03% | 672 | 474 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.05e-24' χ2 p-value for Mo17 x B73: '1.78e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G107120 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.09 x 10-9 | 253 | 135 | 221 | 87 | 65.21% | 28.25% | 388 | 308 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.09e-09' χ2 p-value for Mo17 x B73: '2.25e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G107120 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.630205 x 10-1 | 178 | 91 | 98 | 112 | 66.17% | 53.33% | 269 | 210 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8630205' χ2 p-value for Mo17 x B73: '.0000415' Biased in favor of strain: '' |
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| GRMZM2G107116 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.595803 x 10-1 | 246 | 108 | 225 | 381 | 69.49% | 62.87% | 354 | 606 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2595803' χ2 p-value for Mo17 x B73: '.0474821' Biased in favor of strain: '' |
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| GRMZM2G107116 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.33793 x 10-2 | 575 | 462 | 472 | 399 | 55.45% | 45.81% | 1037 | 871 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004497' χ2 p-value for Mo17 x B73: '.0133793' Biased in favor of strain: 'B73' |
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| GRMZM2G107114 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.16 x 10-14 | 599 | 302 | 483 | 271 | 66.48% | 35.94% | 901 | 754 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.40e-23' χ2 p-value for Mo17 x B73: '1.16e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G107114 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.38 x 10-6 | 349 | 102 | 238 | 260 | 77.38% | 52.21% | 451 | 498 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.38e-06' χ2 p-value for Mo17 x B73: '7.69e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G107096 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.25094 x 10-2 | 3 | 11 | 4 | 18 | 21.43% | 81.82% | 14 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0325094' χ2 p-value for Mo17 x B73: '.0028375' Biased in favor of strain: 'Mo17' |
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| GRMZM2G107096 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G107092 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G107092 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.185458 x 10-1 | 7 | 5 | 9 | 10 | 58.33% | 52.63% | 12 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.8185458' Biased in favor of strain: '' |
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| GRMZM2G107089 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.118355 x 10-1 | 193 | 163 | 130 | 164 | 54.21% | 55.78% | 356 | 294 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1118355' χ2 p-value for Mo17 x B73: '.0473763' Biased in favor of strain: '' |
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| GRMZM2G107089 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.962085 x 10-1 | 431 | 238 | 279 | 524 | 64.42% | 65.26% | 669 | 803 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2185656' χ2 p-value for Mo17 x B73: '.3962085' Biased in favor of strain: '' |
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| GRMZM2G107076 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 4 | 100.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G107076 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.07014 x 10-2 | 155 | 121 | 422 | 203 | 56.16% | 32.48% | 276 | 625 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0407014' χ2 p-value for Mo17 x B73: '1.95e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G107073 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 9 | 7 | 1 | 50.00% | 12.50% | 18 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: '' |
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| GRMZM2G107073 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 2 | 2 | 50.00% | 50.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G107065 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 8 | 0.00% | 100.00% | 2 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G107065 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 4 | 2 | 0.00% | 33.33% | 4 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM2G107031 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.987 x 10-4 | 418 | 293 | 340 | 258 | 58.79% | 43.14% | 711 | 598 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.76e-06' χ2 p-value for Mo17 x B73: '.0007987' Biased in favor of strain: 'B73' |
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| GRMZM2G107031 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.911722 x 10-1 | 100 | 30 | 56 | 97 | 76.92% | 63.40% | 130 | 153 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0131143' χ2 p-value for Mo17 x B73: '.3911722' Biased in favor of strain: '' |
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| GRMZM2G106980 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G106980 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G106974 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.03 x 10-9 | 436 | 217 | 333 | 193 | 66.77% | 36.69% | 653 | 526 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.03e-17' χ2 p-value for Mo17 x B73: '1.03e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G106974 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.83 x 10-6 | 467 | 153 | 329 | 360 | 75.32% | 52.25% | 620 | 689 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.83e-06' χ2 p-value for Mo17 x B73: '9.93e-16' Biased in favor of strain: 'B73' |
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| GRMZM2G106960 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 389 | 14 | 222 | 16 | 96.53% | 6.72% | 403 | 238 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.84e-37' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G106960 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 250 | 28 | 209 | 21 | 89.93% | 9.13% | 278 | 230 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.73e-35' Biased in favor of strain: 'B73' |
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| GRMZM2G106950 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.54 x 10-9 | 6 | 52 | 2 | 128 | 10.34% | 98.46% | 58 | 130 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.54e-09' χ2 p-value for Mo17 x B73: '2.17e-28' Biased in favor of strain: 'Mo17' |
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| GRMZM2G106950 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G106945 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.46 x 10-6 | 207 | 49 | 144 | 116 | 80.86% | 44.62% | 256 | 260 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.46e-06' χ2 p-value for Mo17 x B73: '4.60e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G106945 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.17 x 10-14 | 409 | 161 | 246 | 102 | 71.75% | 29.31% | 570 | 348 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.82e-25' χ2 p-value for Mo17 x B73: '1.17e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G106931 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 2 | 1 | 33.33% | 33.33% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G106931 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 3 | 100.00% | 100.00% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM2G106928 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.0673 x 10-3 | 725 | 293 | 262 | 388 | 71.22% | 59.69% | 1018 | 650 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0020673' χ2 p-value for Mo17 x B73: '.000162' Biased in favor of strain: 'B73' |
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| GRMZM2G106928 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.21365 x 10-1 | 349 | 219 | 199 | 212 | 61.44% | 51.58% | 568 | 411 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.91e-08' χ2 p-value for Mo17 x B73: '.521365' Biased in favor of strain: '' |
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| GRMZM2G106921 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 6 | 75.00% | 0 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G106921 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 4 | 2 | 0.00% | 33.33% | 2 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM2G106917 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.53 x 10-8 | 146 | 64 | 123 | 43 | 69.52% | 25.90% | 210 | 166 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.53e-08' χ2 p-value for Mo17 x B73: '5.33e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G106917 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.83 x 10-11 | 246 | 43 | 129 | 82 | 85.12% | 38.86% | 289 | 211 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.83e-11' χ2 p-value for Mo17 x B73: '1.06e-17' Biased in favor of strain: 'B73' |
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| GRMZM2G106903 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 3.492 x 10-4 | 190 | 141 | 418 | 137 | 57.40% | 24.68% | 331 | 555 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003492' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G106903 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.73 x 10-9 | 427 | 270 | 407 | 214 | 61.26% | 34.46% | 697 | 621 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.73e-09' χ2 p-value for Mo17 x B73: '9.57e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G106881 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.88067 x 10-2 | 121 | 72 | 93 | 68 | 62.69% | 42.24% | 193 | 161 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004201' χ2 p-value for Mo17 x B73: '.0488067' Biased in favor of strain: 'B73' |
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| GRMZM2G106881 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.27 x 10-7 | 155 | 29 | 75 | 64 | 84.24% | 46.04% | 184 | 139 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.27e-07' χ2 p-value for Mo17 x B73: '2.50e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G106836 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G106836 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 4 | 100.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G106834 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 5 | 0 | 0.00% | 0 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G106834 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 4 | 0 | 100.00% | 0.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G106819 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 3 | 1 | 5 | 50.00% | 83.33% | 6 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3864683' χ2 p-value for Mo17 x B73: '.3864763' Biased in favor of strain: '' |
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| GRMZM2G106819 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.0 x 10-6 | 51 | 10 | 56 | 17 | 83.61% | 23.29% | 61 | 73 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.53e-07' χ2 p-value for Mo17 x B73: '5.00e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G106810 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.53 x 10-7 | 335 | 93 | 205 | 195 | 78.27% | 48.75% | 428 | 400 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.53e-07' χ2 p-value for Mo17 x B73: '2.93e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G106810 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.11 x 10-11 | 839 | 575 | 773 | 533 | 59.34% | 40.81% | 1414 | 1306 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.21e-12' χ2 p-value for Mo17 x B73: '3.11e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G106798 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.25 x 10-9 | 110 | 38 | 114 | 34 | 74.32% | 22.97% | 148 | 148 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.25e-09' χ2 p-value for Mo17 x B73: '4.83e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G106798 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | PEG | 4.51 x 10-16 | 0 | 33 | 131 | 0 | 0.00% | 0.00% | 33 | 131 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.51e-16' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G106792 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1437 | 658 | 1168 | 515 | 68.59% | 30.60% | 2095 | 1683 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G106792 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.327269 x 10-1 | 556 | 285 | 518 | 811 | 66.11% | 61.02% | 841 | 1329 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7327269' χ2 p-value for Mo17 x B73: '.0000128' Biased in favor of strain: '' |
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| GRMZM2G106766 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.3275 x 10-2 | 417 | 354 | 459 | 354 | 54.09% | 43.54% | 771 | 813 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.023275' χ2 p-value for Mo17 x B73: '.0002309' Biased in favor of strain: 'B73' |
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| GRMZM2G106766 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.41 x 10-7 | 441 | 133 | 274 | 184 | 76.83% | 40.17% | 574 | 458 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.41e-07' χ2 p-value for Mo17 x B73: '2.57e-33' Biased in favor of strain: 'B73' |
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| GRMZM2G106752 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.60368 x 10-1 | 26 | 26 | 30 | 56 | 50.00% | 65.12% | 52 | 86 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0107861' χ2 p-value for Mo17 x B73: '.760368' Biased in favor of strain: '' |
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| GRMZM2G106752 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.7329 x 10-1 | 74 | 47 | 47 | 43 | 61.16% | 47.78% | 121 | 90 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0141063' χ2 p-value for Mo17 x B73: '.67329' Biased in favor of strain: '' |