GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G109566	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.054571 x 10^-1	4	6	4	10	40.00%	71.43%	10	14	RefGen V2	χ2 p-value for B73 x Mo17: '.0736349' χ2 p-value for Mo17 x B73: '.7054571' Biased in favor of strain: ''
GRMZM2G109566	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.2521 x 10^-3	142	65	131	86	68.60%	39.63%	207	217	RefGen V2	χ2 p-value for B73 x Mo17: '8.70e-08' χ2 p-value for Mo17 x B73: '.0022521' Biased in favor of strain: 'B73'
GRMZM2G109561	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.545395 x 10^-1	78	90	194	259	46.43%	57.17%	168	453	RefGen V2	χ2 p-value for B73 x Mo17: '.3545395' χ2 p-value for Mo17 x B73: '.0022584' Biased in favor of strain: ''
GRMZM2G109561	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.355748 x 10^-1	51	40	42	97	56.04%	69.78%	91	139	RefGen V2	χ2 p-value for B73 x Mo17: '.0315809' χ2 p-value for Mo17 x B73: '.4355748' Biased in favor of strain: ''
GRMZM2G109560	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.166644 x 10^-1	4	7	7	6	36.36%	46.15%	11	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0330044' χ2 p-value for Mo17 x B73: '.1166644' Biased in favor of strain: ''
GRMZM2G109560	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	4	2	5	55.56%	71.43%	9	7	RefGen V2	χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: ''
GRMZM2G109547	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.01 x 10^-7	95	33	113	48	74.22%	29.81%	128	161	RefGen V2	χ2 p-value for B73 x Mo17: '4.25e-08' χ2 p-value for Mo17 x B73: '3.01e-07' Biased in favor of strain: 'B73'
GRMZM2G109547	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	3		100.00%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G109527	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G109527	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	6	1	83.33%	14.29%	6	7	RefGen V2	χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: ''
GRMZM2G109526	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.151 x 10^-4	149	97	170	71	60.57%	29.46%	246	241	RefGen V2	χ2 p-value for B73 x Mo17: '.0009151' χ2 p-value for Mo17 x B73: '1.80e-10' Biased in favor of strain: 'B73'
GRMZM2G109526	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.92296 x 10^-2	52	9	30	38	85.25%	55.88%	61	68	RefGen V2	χ2 p-value for B73 x Mo17: '.0020826' χ2 p-value for Mo17 x B73: '.0592296' Biased in favor of strain: ''
GRMZM2G109509	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.509 x 10^-4	279	93	105	99	75.00%	48.53%	372	204	RefGen V2	χ2 p-value for B73 x Mo17: '.0006509' χ2 p-value for Mo17 x B73: '3.90e-08' Biased in favor of strain: 'B73'
GRMZM2G109509	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.79 x 10^-8	187	57	92	31	76.64%	25.20%	244	123	RefGen V2	χ2 p-value for B73 x Mo17: '8.62e-17' χ2 p-value for Mo17 x B73: '3.79e-08' Biased in favor of strain: 'B73'
GRMZM2G109480	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.276258 x 10^-1	35	44	32	36	44.30%	52.94%	79	68	RefGen V2	χ2 p-value for B73 x Mo17: '.3112612' χ2 p-value for Mo17 x B73: '.6276258' Biased in favor of strain: ''
GRMZM2G109480	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G109464	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.94 x 10^-12	698	201	359	312	77.64%	46.50%	899	671	RefGen V2	χ2 p-value for B73 x Mo17: '2.94e-12' χ2 p-value for Mo17 x B73: '1.52e-28' Biased in favor of strain: 'B73'
GRMZM2G109464	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.042 x 10^-4	227	77	189	125	74.67%	39.81%	304	314	RefGen V2	χ2 p-value for B73 x Mo17: '7.76e-18' χ2 p-value for Mo17 x B73: '.0003042' Biased in favor of strain: 'B73'
GRMZM2G109429	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.1 x 10^-16	904	541	875	569	62.56%	39.40%	1445	1444	RefGen V2	χ2 p-value for B73 x Mo17: '1.31e-21' χ2 p-value for Mo17 x B73: '8.10e-16' Biased in favor of strain: 'B73'
GRMZM2G109429	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1283	225	664	463	85.08%	41.08%	1508	1127	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G109425	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.21996 x 10^-1	129	82	93	225	61.14%	70.75%	211	318	RefGen V2	χ2 p-value for B73 x Mo17: '.0884095' χ2 p-value for Mo17 x B73: '.121996' Biased in favor of strain: ''
GRMZM2G109425	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	189	190	173	173	49.87%	50.00%	379	346	RefGen V2	χ2 p-value for B73 x Mo17: '.9590334' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G109383	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.15 x 10^-7	3528	2405	3165	2757	59.46%	46.56%	5933	5922	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.15e-07' Biased in favor of strain: 'B73'
GRMZM2G109383	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.36 x 10^-8	3551	1506	3147	5263	70.22%	62.58%	5057	8410	RefGen V2	χ2 p-value for B73 x Mo17: '8.36e-08' χ2 p-value for Mo17 x B73: '1.87e-15' Biased in favor of strain: 'B73'
GRMZM2G109354	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.769915 x 10^-1	216	75	131	238	74.23%	64.50%	291	369	RefGen V2	χ2 p-value for B73 x Mo17: '.0062245' χ2 p-value for Mo17 x B73: '.3769915' Biased in favor of strain: ''
GRMZM2G109354	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.08833 x 10^-2	178	137	220	156	56.51%	41.49%	315	376	RefGen V2	χ2 p-value for B73 x Mo17: '.0208833' χ2 p-value for Mo17 x B73: '.000965' Biased in favor of strain: 'B73'
GRMZM2G109352	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.93 x 10^-9	502	245	361	220	67.20%	37.87%	747	581	RefGen V2	χ2 p-value for B73 x Mo17: '5.30e-21' χ2 p-value for Mo17 x B73: '4.93e-09' Biased in favor of strain: 'B73'
GRMZM2G109352	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.69 x 10^-5	638	223	393	609	74.10%	60.78%	861	1002	RefGen V2	χ2 p-value for B73 x Mo17: '3.72e-06' χ2 p-value for Mo17 x B73: '.0000769' Biased in favor of strain: 'B73'
GRMZM2G109348	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.01219 x 10^-2	26	6	16	7	81.25%	30.43%	32	23	RefGen V2	χ2 p-value for B73 x Mo17: '.0801219' χ2 p-value for Mo17 x B73: '.0002278' Biased in favor of strain: ''
GRMZM2G109348	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.319755 x 10^-1	38	30	38	17	55.88%	30.91%	68	55	RefGen V2	χ2 p-value for B73 x Mo17: '.3319755' χ2 p-value for Mo17 x B73: '.004631' Biased in favor of strain: ''
GRMZM2G109315	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.06 x 10^-10	259	136	301	152	65.57%	33.55%	395	453	RefGen V2	χ2 p-value for B73 x Mo17: '6.06e-10' χ2 p-value for Mo17 x B73: '2.55e-12' Biased in favor of strain: 'B73'
GRMZM2G109315	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.09577 x 10^-1	320	176	252	299	64.52%	54.26%	496	551	RefGen V2	χ2 p-value for B73 x Mo17: '.309577' χ2 p-value for Mo17 x B73: '6.60e-10' Biased in favor of strain: ''
GRMZM2G109286	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	2	1	100.00%	33.33%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: ''
GRMZM2G109286	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.414806 x 10^-1	17	7	13	12	70.83%	48.00%	24	25	RefGen V2	χ2 p-value for B73 x Mo17: '.0412268' χ2 p-value for Mo17 x B73: '.8414806' Biased in favor of strain: ''
GRMZM2G109284	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.48 x 10^-8	1274	947	1124	871	57.36%	43.66%	2221	1995	RefGen V2	χ2 p-value for B73 x Mo17: '3.96e-12' χ2 p-value for Mo17 x B73: '1.48e-08' Biased in favor of strain: 'B73'
GRMZM2G109284	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.955106 x 10^-1	1478	726	984	1875	67.06%	65.58%	2204	2859	RefGen V2	χ2 p-value for B73 x Mo17: '.6955106' χ2 p-value for Mo17 x B73: '.218743' Biased in favor of strain: ''
GRMZM2G109271	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	6	0	13	14.29%	100.00%	7	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0032832' χ2 p-value for Mo17 x B73: '.0107875' Biased in favor of strain: ''
GRMZM2G109271	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.624 x 10^-4	1	17	0	18	5.56%	100.00%	18	18	RefGen V2	χ2 p-value for B73 x Mo17: '.0001624' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: 'Mo17'
GRMZM2G109268	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	5	0	3	16.67%	100.00%	6	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G109268	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G109252	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.39326 x 10^-1	230	116	250	890	66.47%	78.07%	346	1140	RefGen V2	χ2 p-value for B73 x Mo17: '.939326' χ2 p-value for Mo17 x B73: '3.14e-16' Biased in favor of strain: ''
GRMZM2G109252	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.798 x 10^-4	66	31	48	205	68.04%	81.03%	97	253	RefGen V2	χ2 p-value for B73 x Mo17: '.0003798' χ2 p-value for Mo17 x B73: '5.59e-23' Biased in favor of strain: ''
GRMZM2G109244	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.74 x 10^-6	173	49	112	54	77.93%	32.53%	222	166	RefGen V2	χ2 p-value for B73 x Mo17: '8.62e-17' χ2 p-value for Mo17 x B73: '6.74e-06' Biased in favor of strain: 'B73'
GRMZM2G109244	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.550915 x 10^-1	105	53	57	68	66.46%	54.40%	158	125	RefGen V2	χ2 p-value for B73 x Mo17: '.9550915' χ2 p-value for Mo17 x B73: '.0036224' Biased in favor of strain: ''
GRMZM2G109221	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.74182 x 10^-2	33	6	24	15	84.62%	38.46%	39	39	RefGen V2	χ2 p-value for B73 x Mo17: '.0174182' χ2 p-value for Mo17 x B73: '.0001866' Biased in favor of strain: ''
GRMZM2G109221	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.726433 x 10^-1	99	55	51	44	64.29%	46.32%	154	95	RefGen V2	χ2 p-value for B73 x Mo17: '.0003917' χ2 p-value for Mo17 x B73: '.4726433' Biased in favor of strain: ''
GRMZM2G109217	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.07 x 10^-12	151	22	134	42	87.28%	23.86%	173	176	RefGen V2	χ2 p-value for B73 x Mo17: '1.04e-22' χ2 p-value for Mo17 x B73: '4.07e-12' Biased in favor of strain: 'B73'
GRMZM2G109217	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.215 x 10^-4	17	62	42	36	21.52%	46.15%	79	78	RefGen V2	χ2 p-value for B73 x Mo17: '1.70e-17' χ2 p-value for Mo17 x B73: '.0001215' Biased in favor of strain: ''
GRMZM2G109201	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.230743 x 10^-1	7	3	2	18	70.00%	90.00%	10	20	RefGen V2	χ2 p-value for B73 x Mo17: '.8230743' χ2 p-value for Mo17 x B73: '.0268567' Biased in favor of strain: ''
GRMZM2G109201	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.316146 x 10^-1	10	4	13	10	71.43%	43.48%	14	23	RefGen V2	χ2 p-value for B73 x Mo17: '.1088094' χ2 p-value for Mo17 x B73: '.5316146' Biased in favor of strain: ''
GRMZM2G109159	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.54 x 10^-5	418	302	394	267	58.06%	40.39%	720	661	RefGen V2	χ2 p-value for B73 x Mo17: '.0000154' χ2 p-value for Mo17 x B73: '7.82e-07' Biased in favor of strain: 'B73'
GRMZM2G109159	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.346806 x 10^-1	47	18	29	35	72.31%	54.69%	65	64	RefGen V2	χ2 p-value for B73 x Mo17: '.3346806' χ2 p-value for Mo17 x B73: '.0420593' Biased in favor of strain: ''
GRMZM2G109142	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.650053 x 10^-1	28	9	9	15	75.68%	62.50%	37	24	RefGen V2	χ2 p-value for B73 x Mo17: '.2450521' χ2 p-value for Mo17 x B73: '.6650053' Biased in favor of strain: ''
GRMZM2G109142	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.531604 x 10^-1	12	17	8	22	41.38%	73.33%	29	30	RefGen V2	χ2 p-value for B73 x Mo17: '.3531604' χ2 p-value for Mo17 x B73: '.0105871' Biased in favor of strain: ''
GRMZM2G109140	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	175	14	191	7	92.59%	3.54%	189	198	RefGen V2	χ2 p-value for B73 x Mo17: '1.12e-31' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G109140	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.92 x 10^-5	50	3	45	9	94.34%	16.67%	53	54	RefGen V2	χ2 p-value for B73 x Mo17: '.0000192' χ2 p-value for Mo17 x B73: '6.48e-15' Biased in favor of strain: 'B73'
GRMZM2G109121	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.50363 x 10^-2	437	168	183	306	72.23%	62.58%	605	489	RefGen V2	χ2 p-value for B73 x Mo17: '.0036909' χ2 p-value for Mo17 x B73: '.0550363' Biased in favor of strain: ''
GRMZM2G109121	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.485063 x 10^-1	297	256	194	206	53.71%	51.50%	553	400	RefGen V2	χ2 p-value for B73 x Mo17: '.0812468' χ2 p-value for Mo17 x B73: '.5485063' Biased in favor of strain: ''
GRMZM2G109120	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.870113 x 10^-1	128	150	186	217	46.04%	53.85%	278	403	RefGen V2	χ2 p-value for B73 x Mo17: '.1870113' χ2 p-value for Mo17 x B73: '.122535' Biased in favor of strain: ''
GRMZM2G109120	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G109071	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	2	0	100.00%	0.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G109071	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G109070	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G109070	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	3	1	50.00%	25.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.0770998' Biased in favor of strain: ''
GRMZM2G109062	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	568	64	265	153	89.87%	36.60%	632	418	RefGen V2	χ2 p-value for B73 x Mo17: '3.53e-35' χ2 p-value for Mo17 x B73: '7.36e-39' Biased in favor of strain: 'B73'
GRMZM2G109062	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.56 x 10^-23	488	148	342	128	76.73%	27.23%	636	470	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '5.56e-23' Biased in favor of strain: 'B73'
GRMZM2G109039	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1628	785	1475	821	67.47%	35.76%	2413	2296	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G109039	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1969	482	893	891	80.33%	49.94%	2451	1784	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G109009	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G109009	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	3	0	100.00%	0.00%	5	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G108997	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	156	86	127	127	64.46%	50.00%	242	254	RefGen V2	χ2 p-value for B73 x Mo17: '6.80e-06' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G108997	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.3 x 10^-14	2	75	4	133	2.60%	97.08%	77	137	RefGen V2	χ2 p-value for B73 x Mo17: '8.64e-33' χ2 p-value for Mo17 x B73: '4.30e-14' Biased in favor of strain: 'Mo17'
GRMZM2G108996	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.001343 x 10^-1	84	57	43	84	59.57%	66.14%	141	127	RefGen V2	χ2 p-value for B73 x Mo17: '.0740125' χ2 p-value for Mo17 x B73: '.9001343' Biased in favor of strain: ''
GRMZM2G108996	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.97 x 10^-5	159	78	171	102	67.09%	37.36%	237	273	RefGen V2	χ2 p-value for B73 x Mo17: '1.43e-07' χ2 p-value for Mo17 x B73: '.0000297' Biased in favor of strain: 'B73'
GRMZM2G108991	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.129237 x 10^-1	52	35	32	46	59.77%	58.97%	87	78	RefGen V2	χ2 p-value for B73 x Mo17: '.0683653' χ2 p-value for Mo17 x B73: '.1129237' Biased in favor of strain: ''
GRMZM2G108991	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.77235 x 10^-2	140	117	96	236	54.47%	71.08%	257	332	RefGen V2	χ2 p-value for B73 x Mo17: '.0000338' χ2 p-value for Mo17 x B73: '.0877235' Biased in favor of strain: ''
GRMZM2G108981	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.017186 x 10^-1	122	46	75	102	72.62%	57.63%	168	177	RefGen V2	χ2 p-value for B73 x Mo17: '.1017186' χ2 p-value for Mo17 x B73: '.0107361' Biased in favor of strain: ''
GRMZM2G108981	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.886881 x 10^-1	205	160	176	166	56.16%	48.54%	365	342	RefGen V2	χ2 p-value for B73 x Mo17: '.0185024' χ2 p-value for Mo17 x B73: '.5886881' Biased in favor of strain: ''
GRMZM2G108933	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.732895 x 10^-1	77	30	32	38	71.96%	54.29%	107	70	RefGen V2	χ2 p-value for B73 x Mo17: '5.53e-06' χ2 p-value for Mo17 x B73: '.4732895' Biased in favor of strain: ''
GRMZM2G108933	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.17 x 10^-18	528	108	247	183	83.02%	42.56%	636	430	RefGen V2	χ2 p-value for B73 x Mo17: '2.17e-18' χ2 p-value for Mo17 x B73: '2.82e-26' Biased in favor of strain: 'B73'
GRMZM2G108912	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.858767 x 10^-1	20	2	7	7	90.91%	50.00%	22	14	RefGen V2	χ2 p-value for B73 x Mo17: '.015862' χ2 p-value for Mo17 x B73: '.1858767' Biased in favor of strain: ''
GRMZM2G108912	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.542 x 10^-3	99	42	91	53	70.21%	36.81%	141	144	RefGen V2	χ2 p-value for B73 x Mo17: '1.58e-06' χ2 p-value for Mo17 x B73: '.001542' Biased in favor of strain: 'B73'
GRMZM2G108898	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.9 x 10^-10	187	64	51	5	74.50%	8.93%	251	56	RefGen V2	χ2 p-value for B73 x Mo17: '8.25e-15' χ2 p-value for Mo17 x B73: '7.90e-10' Biased in favor of strain: 'B73'
GRMZM2G108898	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.202249 x 10^-1	19	16	22	20	54.29%	47.62%	35	42	RefGen V2	χ2 p-value for B73 x Mo17: '.1202249' χ2 p-value for Mo17 x B73: '.0088287' Biased in favor of strain: ''
GRMZM2G108874	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5533 x 10^-3	192	62	108	91	75.59%	45.73%	254	199	RefGen V2	χ2 p-value for B73 x Mo17: '.0025533' χ2 p-value for Mo17 x B73: '3.71e-10' Biased in favor of strain: 'B73'
GRMZM2G108874	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.942661 x 10^-1	231	209	256	210	52.50%	45.06%	440	466	RefGen V2	χ2 p-value for B73 x Mo17: '.2942661' χ2 p-value for Mo17 x B73: '.0330967' Biased in favor of strain: ''
GRMZM2G108865	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.601961 x 10^-1	92	80	103	68	53.49%	39.77%	172	171	RefGen V2	χ2 p-value for B73 x Mo17: '.3601961' χ2 p-value for Mo17 x B73: '.0074392' Biased in favor of strain: ''
GRMZM2G108865	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.4 x 10^-5	9	33	2	47	21.43%	95.92%	42	49	RefGen V2	χ2 p-value for B73 x Mo17: '5.00e-10' χ2 p-value for Mo17 x B73: '.000014' Biased in favor of strain: 'Mo17'
GRMZM2G108861	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.95 x 10^-8	104	8	35	16	92.86%	31.37%	112	51	RefGen V2	χ2 p-value for B73 x Mo17: '4.11e-09' χ2 p-value for Mo17 x B73: '8.95e-08' Biased in favor of strain: 'B73'
GRMZM2G108861	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.28 x 10^-8	321	149	337	208	68.30%	38.17%	470	545	RefGen V2	χ2 p-value for B73 x Mo17: '2.13e-15' χ2 p-value for Mo17 x B73: '3.28e-08' Biased in favor of strain: 'B73'
GRMZM2G108849	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.94 x 10^-11	445	233	389	223	65.63%	36.44%	678	612	RefGen V2	χ2 p-value for B73 x Mo17: '3.89e-16' χ2 p-value for Mo17 x B73: '1.94e-11' Biased in favor of strain: 'B73'
GRMZM2G108849	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.767596 x 10^-1	59	59	125	275	50.00%	68.75%	118	400	RefGen V2	χ2 p-value for B73 x Mo17: '.0001227' χ2 p-value for Mo17 x B73: '.3767596' Biased in favor of strain: ''
GRMZM2G108829	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.35118 x 10^-2	190	67	136	169	73.93%	55.41%	257	305	RefGen V2	χ2 p-value for B73 x Mo17: '.0135118' χ2 p-value for Mo17 x B73: '.0000304' Biased in favor of strain: ''
GRMZM2G108829	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.75 x 10^-6	168	95	146	73	63.88%	33.33%	263	219	RefGen V2	χ2 p-value for B73 x Mo17: '6.75e-06' χ2 p-value for Mo17 x B73: '8.10e-07' Biased in favor of strain: 'B73'
GRMZM2G108819	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.7 x 10^-5	0	26	1	19	0.00%	95.00%	26	20	RefGen V2	χ2 p-value for B73 x Mo17: '3.41e-07' χ2 p-value for Mo17 x B73: '.000057' Biased in favor of strain: 'Mo17'
GRMZM2G108819	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	22	0.00%	100.00%	3	22	RefGen V2	χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: ''
GRMZM2G108780	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	4577	1501	2343	3345	75.30%	58.81%	6078	5688	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.98e-36' Biased in favor of strain: 'B73'
GRMZM2G108780	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.7993 x 10^-3	2135	1794	1629	1794	54.34%	52.41%	3929	3423	RefGen V2	χ2 p-value for B73 x Mo17: '5.32e-08' χ2 p-value for Mo17 x B73: '.0047993' Biased in favor of strain: ''
GRMZM2G108766	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.205 x 10^-4	348	52	161	99	87.00%	38.08%	400	260	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.0001205' Biased in favor of strain: 'B73'
GRMZM2G108766	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1062	106	811	377	90.92%	31.73%	1168	1188	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'

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