GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM5G820996	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.753123 x 10^-1	1611	1761	1433	1492	47.78%	51.01%	3372	2925	RefGen V2	χ2 p-value for B73 x Mo17: '.0097906' χ2 p-value for Mo17 x B73: '.2753123' Biased in favor of strain: ''
GRMZM5G820996	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	4114	1397	1764	2107	74.65%	54.43%	5511	3871	RefGen V2	χ2 p-value for B73 x Mo17: '2.98e-36' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G820912	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	2	0	6	33.33%	100.00%	3	6	RefGen V2	χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM5G820912	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.77061 x 10^-2	100	68	95	65	59.52%	40.62%	168	160	RefGen V2	χ2 p-value for B73 x Mo17: '.0135547' χ2 p-value for Mo17 x B73: '.0177061' Biased in favor of strain: 'B73'
GRMZM5G820781	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1857 x 10^-3	234	159	189	131	59.54%	40.94%	393	320	RefGen V2	χ2 p-value for B73 x Mo17: '.0001548' χ2 p-value for Mo17 x B73: '.0011857' Biased in favor of strain: 'B73'
GRMZM5G820781	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.32667 x 10^-2	197	63	94	135	75.77%	58.95%	260	229	RefGen V2	χ2 p-value for B73 x Mo17: '.0018489' χ2 p-value for Mo17 x B73: '.0132667' Biased in favor of strain: ''
GRMZM5G820727	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.163842 x 10^-1	48	28	30	30	63.16%	50.00%	76	60	RefGen V2	χ2 p-value for B73 x Mo17: '.5163842' χ2 p-value for Mo17 x B73: '.0061699' Biased in favor of strain: ''
GRMZM5G820727	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.055406 x 10^-1	39	31	34	32	55.71%	48.48%	70	66	RefGen V2	χ2 p-value for B73 x Mo17: '.3389798' χ2 p-value for Mo17 x B73: '.8055406' Biased in favor of strain: ''
GRMZM5G820529	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.09 x 10^-22	1	97	0	101	1.02%	100.00%	98	101	RefGen V2	χ2 p-value for B73 x Mo17: '3.09e-22' χ2 p-value for Mo17 x B73: '9.20e-24' Biased in favor of strain: 'Mo17'
GRMZM5G820529	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.21 x 10^-7	0	14	0	62	0.00%	100.00%	14	62	RefGen V2	χ2 p-value for B73 x Mo17: '1.21e-07' χ2 p-value for Mo17 x B73: '2.58e-08' Biased in favor of strain: 'Mo17'
GRMZM5G820343	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5655 x 10^-3	20	0	19	0	100.00%	0.00%	20	19	RefGen V2	χ2 p-value for B73 x Mo17: '.0015655' χ2 p-value for Mo17 x B73: '7.07e-10' Biased in favor of strain: 'B73'
GRMZM5G820343	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.39 x 10^-5	47	14	44	4	77.05%	8.33%	61	48	RefGen V2	χ2 p-value for B73 x Mo17: '.0000239' χ2 p-value for Mo17 x B73: '7.76e-09' Biased in favor of strain: 'B73'
GRMZM5G820163	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.456028 x 10^-1	13	7	18	20	65.00%	52.63%	20	38	RefGen V2	χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.7456028' Biased in favor of strain: ''
GRMZM5G820163	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	0	1	1	100.00%	50.00%	7	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: ''
GRMZM5G819999	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		10	4	1	4	71.43%	80.00%	14	5	RefGen V2	χ2 p-value for B73 x Mo17: '.7054693' χ2 p-value for Mo17 x B73: '.5270893' Biased in favor of strain: ''
GRMZM5G819999	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	2	1	2	77.78%	66.67%	9	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0955807' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM5G819919	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.14 x 10^-12	64	6	74	10	91.43%	11.90%	70	84	RefGen V2	χ2 p-value for B73 x Mo17: '4.14e-12' χ2 p-value for Mo17 x B73: '2.89e-12' Biased in favor of strain: 'B73'
GRMZM5G819919	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.32 x 10^-4	24	0	17	4	100.00%	19.05%	24	21	RefGen V2	χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '3.67e-06' Biased in favor of strain: 'B73'
GRMZM5G819807	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	2	3	50.00%	60.00%	4	5	RefGen V2	χ2 p-value for B73 x Mo17: '.4794928' χ2 p-value for Mo17 x B73: '.7518296' Biased in favor of strain: ''
GRMZM5G819807	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	4	3	0	60.00%	0.00%	10	3	RefGen V2	χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM5G819751	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	1	0	100.00%	0.00%	4	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM5G819751	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G819523	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.612892 x 10^-1	55	37	24	82	59.78%	77.36%	92	106	RefGen V2	χ2 p-value for B73 x Mo17: '.1612892' χ2 p-value for Mo17 x B73: '.0195367' Biased in favor of strain: ''
GRMZM5G819523	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	850	314	782	330	73.02%	29.68%	1164	1112	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G819464	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.521215 x 10^-1	138	115	129	107	54.55%	45.34%	253	236	RefGen V2	χ2 p-value for B73 x Mo17: '.1481779' χ2 p-value for Mo17 x B73: '.1521215' Biased in favor of strain: ''
GRMZM5G819464	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1938 x 10^-3	21	0	32	16	100.00%	33.33%	21	48	RefGen V2	χ2 p-value for B73 x Mo17: '.0011938' χ2 p-value for Mo17 x B73: '9.63e-07' Biased in favor of strain: 'B73'
GRMZM5G819452	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.03 x 10^-15	461	80	227	220	85.21%	49.22%	541	447	RefGen V2	χ2 p-value for B73 x Mo17: '5.66e-20' χ2 p-value for Mo17 x B73: '5.03e-15' Biased in favor of strain: 'B73'
GRMZM5G819452	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.39 x 10^-17	263	74	253	94	78.04%	27.09%	337	347	RefGen V2	χ2 p-value for B73 x Mo17: '7.38e-25' χ2 p-value for Mo17 x B73: '1.39e-17' Biased in favor of strain: 'B73'
GRMZM5G819438	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	6	6	3	25.00%	33.33%	8	9	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM5G819438	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	0	5	6	100.00%	54.55%	6	11	RefGen V2	χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.3937685' Biased in favor of strain: ''
GRMZM5G819320	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.77 x 10^-13	144	180	217	217	44.44%	50.00%	324	434	RefGen V2	χ2 p-value for B73 x Mo17: '2.15e-17' χ2 p-value for Mo17 x B73: '1.77e-13' Biased in favor of strain: ''
GRMZM5G819320	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.870113 x 10^-1	185	154	150	128	54.57%	46.04%	339	278	RefGen V2	χ2 p-value for B73 x Mo17: '.0922418' χ2 p-value for Mo17 x B73: '.1870113' Biased in favor of strain: ''
GRMZM5G819222	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.75 x 10^-13	494	288	637	335	63.17%	34.47%	782	972	RefGen V2	χ2 p-value for B73 x Mo17: '1.75e-13' χ2 p-value for Mo17 x B73: '3.44e-22' Biased in favor of strain: 'B73'
GRMZM5G819222	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	3	4	5	50.00%	55.56%	6	9	RefGen V2	χ2 p-value for B73 x Mo17: '.3864683' χ2 p-value for Mo17 x B73: '.4795' Biased in favor of strain: ''
GRMZM5G819204	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	2	3	50.00%	60.00%	2	5	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.7518296' Biased in favor of strain: ''
GRMZM5G819204	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	0	1	50.00%	100.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM5G819140	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.73 x 10^-6	41	0	22	0	100.00%	0.00%	41	22	RefGen V2	χ2 p-value for B73 x Mo17: '1.52e-10' χ2 p-value for Mo17 x B73: '2.73e-06' Biased in favor of strain: 'B73'
GRMZM5G819140	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.01 x 10^-5	39	0	12	0	100.00%	0.00%	39	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0000101' χ2 p-value for Mo17 x B73: '9.63e-07' Biased in favor of strain: 'B73'
GRMZM5G819035	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G819035	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	4	0	100.00%	0.00%	1	4	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM5G818977	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.83 x 10^-26	835	353	579	270	70.29%	31.80%	1188	849	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.83e-26' Biased in favor of strain: 'B73'
GRMZM5G818977	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0 x 10^-30	1036	229	509	464	81.90%	47.69%	1265	973	RefGen V2	χ2 p-value for B73 x Mo17: '1.46e-30' χ2 p-value for Mo17 x B73: '3.57e-36' Biased in favor of strain: 'B73'
GRMZM5G818887	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	0	0	50.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G818887	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	1	0	66.67%	0.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM5G818760	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.91189 x 10^-2	177	218	142	186	44.81%	56.71%	395	328	RefGen V2	χ2 p-value for B73 x Mo17: '.0391189' χ2 p-value for Mo17 x B73: '.0151199' Biased in favor of strain: 'Mo17'
GRMZM5G818760	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.274145 x 10^-1	138	80	81	160	63.30%	66.39%	218	241	RefGen V2	χ2 p-value for B73 x Mo17: '.2920284' χ2 p-value for Mo17 x B73: '.9274145' Biased in favor of strain: ''
GRMZM5G818655	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	PEG	2.95 x 10^-7	1	15	34	3	6.25%	8.11%	16	37	RefGen V2	χ2 p-value for B73 x Mo17: '2.95e-07' χ2 p-value for Mo17 x B73: '4.15e-14' Biased in favor of strain: ''
GRMZM5G818655	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.698154 x 10^-1	34	43	12	10	44.16%	45.45%	77	22	RefGen V2	χ2 p-value for B73 x Mo17: '.3050589' χ2 p-value for Mo17 x B73: '.6698154' Biased in favor of strain: ''
GRMZM5G818643	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.17228 x 10^-2	60	42	56	76	58.82%	57.58%	102	132	RefGen V2	χ2 p-value for B73 x Mo17: '.0747059' χ2 p-value for Mo17 x B73: '.0817228' Biased in favor of strain: ''
GRMZM5G818643	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	541	14	192	11	97.48%	5.42%	555	203	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G818431	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.04833 x 10^-1	25	3	4	19	89.29%	82.61%	28	23	RefGen V2	χ2 p-value for B73 x Mo17: '.0111181' χ2 p-value for Mo17 x B73: '.104833' Biased in favor of strain: ''
GRMZM5G818431	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.92 x 10^-6	59	19	55	7	75.64%	11.29%	78	62	RefGen V2	χ2 p-value for B73 x Mo17: '5.92e-06' χ2 p-value for Mo17 x B73: '1.09e-09' Biased in favor of strain: 'B73'
GRMZM5G818347	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.33 x 10^-5	17	0	16	0	100.00%	0.00%	17	16	RefGen V2	χ2 p-value for B73 x Mo17: '.0000374' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: 'B73'
GRMZM5G818347	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	0	13	0	100.00%	0.00%	6	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '3.41e-07' Biased in favor of strain: ''
GRMZM5G818186	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.318798 x 10^-1	695	613	466	914	53.13%	66.23%	1308	1380	RefGen V2	χ2 p-value for B73 x Mo17: '2.99e-25' χ2 p-value for Mo17 x B73: '.7318798' Biased in favor of strain: ''
GRMZM5G818186	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.687074 x 10^-1	639	711	661	712	47.33%	51.86%	1350	1373	RefGen V2	χ2 p-value for B73 x Mo17: '.0500435' χ2 p-value for Mo17 x B73: '.1687074' Biased in favor of strain: ''
GRMZM5G818058	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.43 x 10^-8	12	59	22	88	16.90%	80.00%	71	110	RefGen V2	χ2 p-value for B73 x Mo17: '2.43e-08' χ2 p-value for Mo17 x B73: '3.12e-10' Biased in favor of strain: 'Mo17'
GRMZM5G818058	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.081797 x 10^-1	9	9	10	29	50.00%	74.36%	18	39	RefGen V2	χ2 p-value for B73 x Mo17: '.1336079' χ2 p-value for Mo17 x B73: '.3081797' Biased in favor of strain: ''
GRMZM5G817995	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		19	0	6	0	100.00%	0.00%	19	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0020548' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: ''
GRMZM5G817995	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	0	100.00%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G817886	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.15 x 10^-15	1548	743	1358	983	67.57%	41.99%	2291	2341	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '9.15e-15' Biased in favor of strain: 'B73'
GRMZM5G817886	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.34 x 10^-9	3041	1240	1585	1912	71.03%	54.68%	4281	3497	RefGen V2	χ2 p-value for B73 x Mo17: '1.34e-09' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G817777	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.89 x 10^-8	3	20	3	92	13.04%	96.84%	23	95	RefGen V2	χ2 p-value for B73 x Mo17: '4.89e-08' χ2 p-value for Mo17 x B73: '4.40e-10' Biased in favor of strain: 'Mo17'
GRMZM5G817777	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.37416 x 10^-2	68	89	163	265	43.31%	61.92%	157	428	RefGen V2	χ2 p-value for B73 x Mo17: '.0937416' χ2 p-value for Mo17 x B73: '8.21e-07' Biased in favor of strain: ''
GRMZM5G817759	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	440	90	455	112	83.02%	19.75%	530	567	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G817759	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.2 x 10^-29	715	128	450	202	84.82%	30.98%	843	652	RefGen V2	χ2 p-value for B73 x Mo17: '5.20e-29' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G817651	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	4	5	5	42.86%	50.00%	7	10	RefGen V2	χ2 p-value for B73 x Mo17: '.1814437' χ2 p-value for Mo17 x B73: '.2635524' Biased in favor of strain: ''
GRMZM5G817651	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	8	6	5	5	57.14%	50.00%	14	10	RefGen V2	χ2 p-value for B73 x Mo17: '.5929801' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM5G817559	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.0275 x 10^-2	24	43	5	33	35.82%	86.84%	67	38	RefGen V2	χ2 p-value for B73 x Mo17: '.020275' χ2 p-value for Mo17 x B73: '5.57e-06' Biased in favor of strain: 'Mo17'
GRMZM5G817559	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.385675 x 10^-1	103	57	55	178	64.38%	76.39%	160	233	RefGen V2	χ2 p-value for B73 x Mo17: '.5385675' χ2 p-value for Mo17 x B73: '.0016325' Biased in favor of strain: ''
GRMZM5G817551	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.336345 x 10^-1	75	29	35	67	72.12%	65.69%	104	102	RefGen V2	χ2 p-value for B73 x Mo17: '.2385202' χ2 p-value for Mo17 x B73: '.8336345' Biased in favor of strain: ''
GRMZM5G817551	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.507628 x 10^-1	100	64	70	54	60.98%	43.55%	164	124	RefGen V2	χ2 p-value for B73 x Mo17: '.0049368' χ2 p-value for Mo17 x B73: '.1507628' Biased in favor of strain: ''
GRMZM5G817439	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	1	0	50.00%	0.00%	4	1	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM5G817439	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	2		100.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G817350	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	8	0	36	0.00%	100.00%	8	36	RefGen V2	χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: ''
GRMZM5G817350	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.54 x 10^-8	0	32	0	58	0.00%	100.00%	32	58	RefGen V2	χ2 p-value for B73 x Mo17: '1.54e-08' χ2 p-value for Mo17 x B73: '2.62e-14' Biased in favor of strain: 'Mo17'
GRMZM5G817173	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	7	0	80.00%	0.00%	5	7	RefGen V2	χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: ''
GRMZM5G817173	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.43059 x 10^-2	51	0	8	4	100.00%	33.33%	51	12	RefGen V2	χ2 p-value for B73 x Mo17: '4.42e-07' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM5G817046	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.97 x 10^-10	106	2	30	6	98.15%	16.67%	108	36	RefGen V2	χ2 p-value for B73 x Mo17: '3.92e-12' χ2 p-value for Mo17 x B73: '1.97e-10' Biased in favor of strain: 'B73'
GRMZM5G817046	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.86 x 10^-19	152	10	98	6	93.83%	5.77%	162	104	RefGen V2	χ2 p-value for B73 x Mo17: '6.65e-29' χ2 p-value for Mo17 x B73: '1.86e-19' Biased in favor of strain: 'B73'
GRMZM5G816891	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.553 x 10^-4	613	394	440	338	60.87%	43.44%	1007	778	RefGen V2	χ2 p-value for B73 x Mo17: '5.15e-12' χ2 p-value for Mo17 x B73: '.0002553' Biased in favor of strain: 'B73'
GRMZM5G816891	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.382573 x 10^-1	195	141	142	290	58.04%	67.13%	336	432	RefGen V2	χ2 p-value for B73 x Mo17: '.0007902' χ2 p-value for Mo17 x B73: '.8382573' Biased in favor of strain: ''
GRMZM5G816791	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.517162 x 10^-1	102	25	33	80	80.31%	70.80%	127	113	RefGen V2	χ2 p-value for B73 x Mo17: '.0011035' χ2 p-value for Mo17 x B73: '.3517162' Biased in favor of strain: ''
GRMZM5G816791	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.290345 x 10^-1	74	41	39	36	64.35%	48.00%	115	75	RefGen V2	χ2 p-value for B73 x Mo17: '.0020891' χ2 p-value for Mo17 x B73: '.7290345' Biased in favor of strain: ''
GRMZM5G816784	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	12	13	19	19	48.00%	50.00%	25	38	RefGen V2	χ2 p-value for B73 x Mo17: '.8414806' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM5G816784	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.170598 x 10^-1	11	7	5	17	61.11%	77.27%	18	22	RefGen V2	χ2 p-value for B73 x Mo17: '.6170598' χ2 p-value for Mo17 x B73: '.2912929' Biased in favor of strain: ''
GRMZM5G816779	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	1	100.00%	100.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM5G816779	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	0	0.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G816636	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	8	0	5	0.00%	100.00%	8	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM5G816636	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G816552	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.71 x 10^-6	48	65	32	153	42.48%	82.70%	113	185	RefGen V2	χ2 p-value for B73 x Mo17: '4.91e-08' χ2 p-value for Mo17 x B73: '3.71e-06' Biased in favor of strain: 'Mo17'
GRMZM5G816552	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.407 x 10^-4	50	96	21	87	34.25%	80.56%	146	108	RefGen V2	χ2 p-value for B73 x Mo17: '.0001407' χ2 p-value for Mo17 x B73: '2.14e-10' Biased in favor of strain: 'Mo17'
GRMZM5G816545	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	9	9	17	11	50.00%	39.29%	18	28	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: ''
GRMZM5G816545	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		19	3	5	1	86.36%	16.67%	22	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0500182' χ2 p-value for Mo17 x B73: '.0093748' Biased in favor of strain: ''
GRMZM5G816457	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	4	6	1	50.00%	14.29%	8	7	RefGen V2	χ2 p-value for B73 x Mo17: '.3173024' χ2 p-value for Mo17 x B73: '.0032835' Biased in favor of strain: ''
GRMZM5G816457	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	187	13	193	10	93.50%	4.93%	200	203	RefGen V2	χ2 p-value for B73 x Mo17: '8.66e-35' χ2 p-value for Mo17 x B73: '9.28e-38' Biased in favor of strain: 'B73'
GRMZM5G816386	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.57 x 10^-11	108	29	122	37	78.83%	23.27%	137	159	RefGen V2	χ2 p-value for B73 x Mo17: '1.48e-11' χ2 p-value for Mo17 x B73: '1.57e-11' Biased in favor of strain: 'B73'
GRMZM5G816386	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.0 x 10^-19	157	0	127	5	100.00%	3.79%	157	132	RefGen V2	χ2 p-value for B73 x Mo17: '8.00e-19' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G816356	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.005452 x 10^-1	281	95	113	244	74.73%	68.35%	376	357	RefGen V2	χ2 p-value for B73 x Mo17: '.0009055' χ2 p-value for Mo17 x B73: '.5005452' Biased in favor of strain: ''
GRMZM5G816356	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.47139 x 10^-2	236	133	197	162	63.96%	45.13%	369	359	RefGen V2	χ2 p-value for B73 x Mo17: '8.23e-08' χ2 p-value for Mo17 x B73: '.0647139' Biased in favor of strain: ''

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