GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G112238	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	82119	31632	106661	40975	72.19%	27.75%	113751	147636	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G112238	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5688 x 10^-3	104	23	14	8	81.89%	36.36%	127	22	RefGen V2	χ2 p-value for B73 x Mo17: '.0002735' χ2 p-value for Mo17 x B73: '.0025688' Biased in favor of strain: 'B73'
GRMZM2G112222	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	6	7	100.00%	53.85%	2	13	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.3267995' Biased in favor of strain: ''
GRMZM2G112222	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	9	21	66.67%	70.00%	3	30	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.0284597' Biased in favor of strain: ''
GRMZM2G112210	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	3	0	75.00%	0.00%	4	3	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G112210	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G112205	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	4	0.00%	100.00%	1	4	RefGen V2	χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G112205	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G112176	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	0	2	75.00%	100.00%	4	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G112176	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	3	100.00%	100.00%	1	3	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G112149	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	4379	528	2404	1265	89.24%	34.48%	4907	3669	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G112149	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2116	798	2153	914	72.61%	29.80%	2914	3067	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G112079	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		19	7	1	2	73.08%	66.67%	26	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0186029' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G112079	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.838938 x 10^-1	11	4	1	10	73.33%	90.91%	15	11	RefGen V2	χ2 p-value for B73 x Mo17: '.5838938' χ2 p-value for Mo17 x B73: '.0880815' Biased in favor of strain: ''
GRMZM2G112074	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.543385 x 10^-1	129	72	79	177	64.18%	69.14%	201	256	RefGen V2	χ2 p-value for B73 x Mo17: '.4543385' χ2 p-value for Mo17 x B73: '.4010831' Biased in favor of strain: ''
GRMZM2G112074	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.83525 x 10^-2	277	196	281	234	58.56%	45.44%	473	515	RefGen V2	χ2 p-value for B73 x Mo17: '.0001958' χ2 p-value for Mo17 x B73: '.0383525' Biased in favor of strain: 'B73'
GRMZM2G112072	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	3	0	100.00%	0.00%	3	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G112072	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G112057	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.301 x 10^-4	214	66	159	193	76.43%	54.83%	280	352	RefGen V2	χ2 p-value for B73 x Mo17: '.0005301' χ2 p-value for Mo17 x B73: '2.46e-06' Biased in favor of strain: 'B73'
GRMZM2G112057	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.287333 x 10^-1	24	3	29	34	88.89%	53.97%	27	63	RefGen V2	χ2 p-value for B73 x Mo17: '.0000531' χ2 p-value for Mo17 x B73: '.5287333' Biased in favor of strain: ''
GRMZM2G112050	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.083652 x 10^-1	8	9	20	10	47.06%	33.33%	17	30	RefGen V2	χ2 p-value for B73 x Mo17: '.8083652' χ2 p-value for Mo17 x B73: '.0678892' Biased in favor of strain: ''
GRMZM2G112050	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.913014 x 10^-1	17	5	23	13	77.27%	36.11%	22	36	RefGen V2	χ2 p-value for B73 x Mo17: '.2913014' χ2 p-value for Mo17 x B73: '.0001006' Biased in favor of strain: ''
GRMZM2G112003	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.577994 x 10^-1	119	60	107	111	66.48%	50.92%	179	218	RefGen V2	χ2 p-value for B73 x Mo17: '.9577994' χ2 p-value for Mo17 x B73: '8.11e-07' Biased in favor of strain: ''
GRMZM2G112003	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.695641 x 10^-1	116	96	77	107	54.72%	58.15%	212	184	RefGen V2	χ2 p-value for B73 x Mo17: '.1695641' χ2 p-value for Mo17 x B73: '.0269923' Biased in favor of strain: ''
GRMZM2G111998	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.96 x 10^-5	6	31	21	60	16.22%	74.07%	37	81	RefGen V2	χ2 p-value for B73 x Mo17: '.0000396' χ2 p-value for Mo17 x B73: '.0000147' Biased in favor of strain: 'Mo17'
GRMZM2G111998	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	148	479	137	1152	23.60%	89.37%	627	1289	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G111954	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.937409 x 10^-1	62	37	35	47	62.63%	57.32%	99	82	RefGen V2	χ2 p-value for B73 x Mo17: '.3937409' χ2 p-value for Mo17 x B73: '.0724947' Biased in favor of strain: ''
GRMZM2G111954	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	2	0	100.00%	0.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G111928	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.68 x 10^-26	4	125	6	168	3.10%	96.55%	129	174	RefGen V2	χ2 p-value for B73 x Mo17: '1.68e-26' χ2 p-value for Mo17 x B73: '1.14e-34' Biased in favor of strain: 'Mo17'
GRMZM2G111928	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.142005 x 10^-1	16	11	6	31	59.26%	83.78%	27	37	RefGen V2	χ2 p-value for B73 x Mo17: '.4142005' χ2 p-value for Mo17 x B73: '.0271952' Biased in favor of strain: ''
GRMZM2G111926	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	1		50.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G111926	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	3		100.00%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G111923	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.53421 x 10^-2	151	101	124	93	59.92%	42.86%	252	217	RefGen V2	χ2 p-value for B73 x Mo17: '.0016344' χ2 p-value for Mo17 x B73: '.0353421' Biased in favor of strain: 'B73'
GRMZM2G111923	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.1957 x 10^-3	303	81	146	213	78.91%	59.33%	384	359	RefGen V2	χ2 p-value for B73 x Mo17: '3.62e-07' χ2 p-value for Mo17 x B73: '.0031957' Biased in favor of strain: 'B73'
GRMZM2G111922	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.814559 x 10^-1	22	6	12	10	78.57%	45.45%	28	22	RefGen V2	χ2 p-value for B73 x Mo17: '.1814559' χ2 p-value for Mo17 x B73: '.0348085' Biased in favor of strain: ''
GRMZM2G111922	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.568392 x 10^-1	11	17	10	27	39.29%	72.97%	28	37	RefGen V2	χ2 p-value for B73 x Mo17: '.2568392' χ2 p-value for Mo17 x B73: '.0051935' Biased in favor of strain: ''
GRMZM2G111917	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.694564 x 10^-1	49	20	46	36	71.01%	43.90%	69	82	RefGen V2	χ2 p-value for B73 x Mo17: '.0004809' χ2 p-value for Mo17 x B73: '.2694564' Biased in favor of strain: ''
GRMZM2G111917	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.635524 x 10^-1	34	1	5	5	97.14%	50.00%	35	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0001309' χ2 p-value for Mo17 x B73: '.2635524' Biased in favor of strain: ''
GRMZM2G111912	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	1	3	50.00%	75.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: ''
GRMZM2G111912	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.05457 x 10^-1	16	10	13	15	61.54%	53.57%	26	28	RefGen V2	χ2 p-value for B73 x Mo17: '.2393165' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: ''
GRMZM2G111907	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.330289 x 10^-1	46	44	34	32	51.11%	48.48%	90	66	RefGen V2	χ2 p-value for B73 x Mo17: '.8330289' χ2 p-value for Mo17 x B73: '.8055406' Biased in favor of strain: ''
GRMZM2G111907	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.19339 x 10^-2	88	31	37	44	73.95%	54.32%	119	81	RefGen V2	χ2 p-value for B73 x Mo17: '.0919339' χ2 p-value for Mo17 x B73: '.0184221' Biased in favor of strain: ''
GRMZM2G111903	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G111903	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		11	5	0	0	68.75%		16	0	RefGen V2	χ2 p-value for B73 x Mo17: '.1336144' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G111886	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.622187 x 10^-1	96	29	68	63	76.80%	48.09%	125	131	RefGen V2	χ2 p-value for B73 x Mo17: '2.06e-09' χ2 p-value for Mo17 x B73: '.6622187' Biased in favor of strain: ''
GRMZM2G111886	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.161531 x 10^-1	29	4	13	24	87.88%	64.86%	33	37	RefGen V2	χ2 p-value for B73 x Mo17: '.0097406' χ2 p-value for Mo17 x B73: '.8161531' Biased in favor of strain: ''
GRMZM2G111872	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.5169 x 10^-3	633	255	528	754	71.28%	58.81%	888	1282	RefGen V2	χ2 p-value for B73 x Mo17: '.0035169' χ2 p-value for Mo17 x B73: '2.46e-09' Biased in favor of strain: 'B73'
GRMZM2G111872	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.43 x 10^-8	472	317	445	284	59.82%	38.96%	789	729	RefGen V2	χ2 p-value for B73 x Mo17: '3.43e-08' χ2 p-value for Mo17 x B73: '2.48e-09' Biased in favor of strain: 'B73'
GRMZM2G111846	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.81 x 10^-26	0	153	1	114	0.00%	99.13%	153	115	RefGen V2	χ2 p-value for B73 x Mo17: '3.83e-35' χ2 p-value for Mo17 x B73: '5.81e-26' Biased in favor of strain: 'Mo17'
GRMZM2G111846	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.56 x 10^-12	0	68	0	98	0.00%	100.00%	68	98	RefGen V2	χ2 p-value for B73 x Mo17: '1.99e-31' χ2 p-value for Mo17 x B73: '2.56e-12' Biased in favor of strain: 'Mo17'
GRMZM2G111818	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.6772 x 10^-2	133	44	121	157	75.14%	56.47%	177	278	RefGen V2	χ2 p-value for B73 x Mo17: '.016772' χ2 p-value for Mo17 x B73: '.0003124' Biased in favor of strain: ''
GRMZM2G111818	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.17691 x 10^-2	175	82	160	118	68.09%	42.45%	257	278	RefGen V2	χ2 p-value for B73 x Mo17: '6.58e-09' χ2 p-value for Mo17 x B73: '.0117691' Biased in favor of strain: 'B73'
GRMZM2G111782	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.45 x 10^-5	331	170	298	210	66.07%	41.34%	501	508	RefGen V2	χ2 p-value for B73 x Mo17: '6.34e-13' χ2 p-value for Mo17 x B73: '.0000945' Biased in favor of strain: 'B73'
GRMZM2G111782	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.9 x 10^-7	355	102	252	200	77.68%	44.25%	457	452	RefGen V2	χ2 p-value for B73 x Mo17: '5.90e-07' χ2 p-value for Mo17 x B73: '4.94e-24' Biased in favor of strain: 'B73'
GRMZM2G111780	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1555 x 10^-3	85	18	62	71	82.52%	53.38%	103	133	RefGen V2	χ2 p-value for B73 x Mo17: '.0006403' χ2 p-value for Mo17 x B73: '.0011555' Biased in favor of strain: 'B73'
GRMZM2G111780	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.5892 x 10^-3	125	83	121	60	60.10%	33.15%	208	181	RefGen V2	χ2 p-value for B73 x Mo17: '.0035892' χ2 p-value for Mo17 x B73: '5.79e-06' Biased in favor of strain: 'B73'
GRMZM2G111770	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.126908 x 10^-1	12	9	7	18	57.14%	72.00%	21	25	RefGen V2	χ2 p-value for B73 x Mo17: '.5126908' χ2 p-value for Mo17 x B73: '.0278069' Biased in favor of strain: ''
GRMZM2G111770	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.57819 x 10^-2	38	1	14	54	97.44%	79.41%	39	68	RefGen V2	χ2 p-value for B73 x Mo17: '.0000458' χ2 p-value for Mo17 x B73: '.0257819' Biased in favor of strain: ''
GRMZM2G111760	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G111760	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.9488 x 10^-3	128	83	211	94	60.66%	30.82%	211	305	RefGen V2	χ2 p-value for B73 x Mo17: '.0019488' χ2 p-value for Mo17 x B73: '2.09e-11' Biased in favor of strain: 'B73'
GRMZM2G111731	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.74 x 10^-6	80	32	60	17	71.43%	22.08%	112	77	RefGen V2	χ2 p-value for B73 x Mo17: '5.74e-06' χ2 p-value for Mo17 x B73: '9.57e-07' Biased in favor of strain: 'B73'
GRMZM2G111731	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		14	0	2	5	100.00%	71.43%	14	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0081512' χ2 p-value for Mo17 x B73: '.7892681' Biased in favor of strain: ''
GRMZM2G111720	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999996 x 10^-1	28	23	17	34	54.90%	66.67%	51	51	RefGen V2	χ2 p-value for B73 x Mo17: '.0746995' χ2 p-value for Mo17 x B73: '.9999996' Biased in favor of strain: ''
GRMZM2G111720	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.962534 x 10^-1	69	66	50	45	51.11%	47.37%	135	95	RefGen V2	χ2 p-value for B73 x Mo17: '.7962534' χ2 p-value for Mo17 x B73: '.6079589' Biased in favor of strain: ''
GRMZM2G111715	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.92 x 10^-26	236	0	111	0	100.00%	0.00%	236	111	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '5.92e-26' Biased in favor of strain: 'B73'
GRMZM2G111715	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G111713	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.160206 x 10^-1	81	66	71	38	55.10%	34.86%	147	109	RefGen V2	χ2 p-value for B73 x Mo17: '.2160206' χ2 p-value for Mo17 x B73: '.0015732' Biased in favor of strain: ''
GRMZM2G111713	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.093107 x 10^-1	34	13	30	27	72.34%	47.37%	47	57	RefGen V2	χ2 p-value for B73 x Mo17: '.4093107' χ2 p-value for Mo17 x B73: '.0019966' Biased in favor of strain: ''
GRMZM2G111711	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G111711	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.74 x 10^-5	29	0	17	0	100.00%	0.00%	29	17	RefGen V2	χ2 p-value for B73 x Mo17: '7.24e-08' χ2 p-value for Mo17 x B73: '.0000374' Biased in favor of strain: 'B73'
GRMZM2G111697	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	3	0.00%	100.00%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G111697	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G111679	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.89248 x 10^-1	18	10	13	16	64.29%	55.17%	28	29	RefGen V2	χ2 p-value for B73 x Mo17: '.789248' χ2 p-value for Mo17 x B73: '.1891612' Biased in favor of strain: ''
GRMZM2G111679	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.727801 x 10^-1	19	20	31	15	48.72%	32.61%	39	46	RefGen V2	χ2 p-value for B73 x Mo17: '.8727801' χ2 p-value for Mo17 x B73: '.0183207' Biased in favor of strain: ''
GRMZM2G111666	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.640453 x 10^-1	27	18	54	43	60.00%	44.33%	45	97	RefGen V2	χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.2640453' Biased in favor of strain: ''
GRMZM2G111666	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	1		50.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G111642	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.102 x 10^-4	439	162	419	560	73.04%	57.20%	601	979	RefGen V2	χ2 p-value for B73 x Mo17: '.0009102' χ2 p-value for Mo17 x B73: '3.33e-10' Biased in favor of strain: 'B73'
GRMZM2G111642	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.49 x 10^-7	417	267	410	275	60.96%	40.15%	684	685	RefGen V2	χ2 p-value for B73 x Mo17: '9.73e-09' χ2 p-value for Mo17 x B73: '2.49e-07' Biased in favor of strain: 'B73'
GRMZM2G111632	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.459745 x 10^-1	52	54	46	52	49.06%	53.06%	106	98	RefGen V2	χ2 p-value for B73 x Mo17: '.8459745' χ2 p-value for Mo17 x B73: '.544454' Biased in favor of strain: ''
GRMZM2G111632	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.093382 x 10^-1	65	28	37	46	69.89%	55.42%	93	83	RefGen V2	χ2 p-value for B73 x Mo17: '.5093382' χ2 p-value for Mo17 x B73: '.0297636' Biased in favor of strain: ''
GRMZM2G111614	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	1	2	50.00%	66.67%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM2G111614	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	3	1	50.00%	25.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G111611	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.93 x 10^-16	117	13	90	9	90.00%	9.09%	130	99	RefGen V2	χ2 p-value for B73 x Mo17: '7.42e-20' χ2 p-value for Mo17 x B73: '3.93e-16' Biased in favor of strain: 'B73'
GRMZM2G111611	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.3 x 10^-13	194	21	122	31	90.23%	20.26%	215	153	RefGen V2	χ2 p-value for B73 x Mo17: '2.30e-13' χ2 p-value for Mo17 x B73: '4.15e-34' Biased in favor of strain: 'B73'
GRMZM2G111603	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	3	5	2	50.00%	28.57%	6	7	RefGen V2	χ2 p-value for B73 x Mo17: '.3864683' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: ''
GRMZM2G111603	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	1	7	0.00%	87.50%	3	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: ''
GRMZM2G111596	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.26119 x 10^-2	342	212	234	190	61.73%	44.81%	554	424	RefGen V2	χ2 p-value for B73 x Mo17: '3.33e-08' χ2 p-value for Mo17 x B73: '.0326119' Biased in favor of strain: 'B73'
GRMZM2G111596	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	9.9548 x 10^-3	671	395	342	522	62.95%	60.42%	1066	864	RefGen V2	χ2 p-value for B73 x Mo17: '.0099548' χ2 p-value for Mo17 x B73: '.0000973' Biased in favor of strain: ''
GRMZM2G111593	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	1	2	1	85.71%	33.33%	7	3	RefGen V2	χ2 p-value for B73 x Mo17: '.2850535' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: ''
GRMZM2G111593	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.451147 x 10^-1	79	50	106	105	61.24%	49.76%	129	211	RefGen V2	χ2 p-value for B73 x Mo17: '.0106705' χ2 p-value for Mo17 x B73: '.9451147' Biased in favor of strain: ''
GRMZM2G111579	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	6	6	6	9	50.00%	60.00%	12	15	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.438578' Biased in favor of strain: ''
GRMZM2G111579	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	3	2	4	62.50%	66.67%	8	6	RefGen V2	χ2 p-value for B73 x Mo17: '.8025764' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM2G111537	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	2	0	50.00%	0.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G111537	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0692 x 10^-3	19	2	22	5	90.48%	18.52%	21	27	RefGen V2	χ2 p-value for B73 x Mo17: '.0002075' χ2 p-value for Mo17 x B73: '.0010692' Biased in favor of strain: 'B73'
GRMZM2G111533	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	5	4	3	16.67%	42.86%	6	7	RefGen V2	χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: ''
GRMZM2G111533	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	2	1	11	75.00%	91.67%	8	12	RefGen V2	χ2 p-value for B73 x Mo17: '.6170834' χ2 p-value for Mo17 x B73: '.0661926' Biased in favor of strain: ''
GRMZM2G111529	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.346221 x 10^-1	181	77	84	207	70.16%	71.13%	258	291	RefGen V2	χ2 p-value for B73 x Mo17: '.2346221' χ2 p-value for Mo17 x B73: '.1059644' Biased in favor of strain: ''
GRMZM2G111529	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.327676 x 10^-1	56	48	31	55	53.85%	63.95%	104	86	RefGen V2	χ2 p-value for B73 x Mo17: '.4327676' χ2 p-value for Mo17 x B73: '.0096539' Biased in favor of strain: ''
GRMZM2G111511	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.791 x 10^-4	171	84	108	63	67.06%	36.84%	255	171	RefGen V2	χ2 p-value for B73 x Mo17: '5.09e-08' χ2 p-value for Mo17 x B73: '.0005791' Biased in favor of strain: 'B73'
GRMZM2G111511	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.841341 x 10^-1	158	82	57	104	65.83%	64.60%	240	161	RefGen V2	χ2 p-value for B73 x Mo17: '.7841341' χ2 p-value for Mo17 x B73: '.5773369' Biased in favor of strain: ''

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