GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G113439	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.739027 x 10^-1	162	91	152	216	64.03%	58.70%	253	368	RefGen V2	χ2 p-value for B73 x Mo17: '.3739027' χ2 p-value for Mo17 x B73: '.0011798' Biased in favor of strain: ''
GRMZM2G113439	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.567213 x 10^-1	203	161	166	158	55.77%	48.77%	364	324	RefGen V2	χ2 p-value for B73 x Mo17: '.0277078' χ2 p-value for Mo17 x B73: '.6567213' Biased in favor of strain: ''
GRMZM2G113432	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.7471 x 10^-3	116	71	143	98	62.03%	40.66%	187	241	RefGen V2	χ2 p-value for B73 x Mo17: '.0009993' χ2 p-value for Mo17 x B73: '.0037471' Biased in favor of strain: 'B73'
GRMZM2G113432	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.441839 x 10^-1	78	45	39	104	63.41%	72.73%	123	143	RefGen V2	χ2 p-value for B73 x Mo17: '.4441839' χ2 p-value for Mo17 x B73: '.1241925' Biased in favor of strain: ''
GRMZM2G113423	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.808406 x 10^-1	25	8	12	29	75.76%	70.73%	33	41	RefGen V2	χ2 p-value for B73 x Mo17: '.2679482' χ2 p-value for Mo17 x B73: '.5808406' Biased in favor of strain: ''
GRMZM2G113423	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.657123 x 10^-1	4	8	4	7	33.33%	63.64%	12	11	RefGen V2	χ2 p-value for B73 x Mo17: '.2482131' χ2 p-value for Mo17 x B73: '.3657123' Biased in favor of strain: ''
GRMZM2G113420	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.23 x 10^-13	365	191	429	243	65.65%	36.16%	556	672	RefGen V2	χ2 p-value for B73 x Mo17: '1.59e-13' χ2 p-value for Mo17 x B73: '7.23e-13' Biased in favor of strain: 'B73'
GRMZM2G113420	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.191266 x 10^-1	136	64	64	130	68.00%	67.01%	200	194	RefGen V2	χ2 p-value for B73 x Mo17: '.6892049' χ2 p-value for Mo17 x B73: '.9191266' Biased in favor of strain: ''
GRMZM2G113415	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	312	1	165	4	99.68%	2.37%	313	169	RefGen V2	χ2 p-value for B73 x Mo17: '2.96e-35' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G113415	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	539	7	426	8	98.72%	1.84%	546	434	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G113414	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.3 x 10^-29	1241	604	884	471	67.26%	34.76%	1845	1355	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.26e-29' Biased in favor of strain: 'B73'
GRMZM2G113414	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.1931 x 10^-3	1274	548	728	1008	69.92%	58.06%	1822	1736	RefGen V2	χ2 p-value for B73 x Mo17: '.0031931' χ2 p-value for Mo17 x B73: '2.89e-14' Biased in favor of strain: 'B73'
GRMZM2G113409	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.309611 x 10^-1	251	117	160	70	68.21%	30.43%	368	230	RefGen V2	χ2 p-value for B73 x Mo17: '.5309611' χ2 p-value for Mo17 x B73: '2.13e-31' Biased in favor of strain: ''
GRMZM2G113409	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.77 x 10^-12	330	172	351	178	65.74%	33.65%	502	529	RefGen V2	χ2 p-value for B73 x Mo17: '1.77e-12' χ2 p-value for Mo17 x B73: '5.41e-14' Biased in favor of strain: 'B73'
GRMZM2G113408	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	6089	2604	5165	2546	70.04%	33.02%	8693	7711	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G113408	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3676	1248	1785	1681	74.65%	48.50%	4924	3466	RefGen V2	χ2 p-value for B73 x Mo17: '1.33e-32' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G113401	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.0432 x 10^-2	405	297	344	301	57.69%	46.67%	702	645	RefGen V2	χ2 p-value for B73 x Mo17: '.0000458' χ2 p-value for Mo17 x B73: '.090432' Biased in favor of strain: ''
GRMZM2G113401	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.980903 x 10^-1	685	419	368	697	62.05%	65.45%	1104	1065	RefGen V2	χ2 p-value for B73 x Mo17: '.001129' χ2 p-value for Mo17 x B73: '.3980903' Biased in favor of strain: ''
GRMZM2G113396	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.889983 x 10^-1	139	79	76	155	63.76%	67.10%	218	231	RefGen V2	χ2 p-value for B73 x Mo17: '.3628183' χ2 p-value for Mo17 x B73: '.8889983' Biased in favor of strain: ''
GRMZM2G113396	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.127019 x 10^-1	240	232	176	211	50.85%	54.52%	472	387	RefGen V2	χ2 p-value for B73 x Mo17: '.7127019' χ2 p-value for Mo17 x B73: '.0752152' Biased in favor of strain: ''
GRMZM2G113382	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.156243 x 10^-1	330	261	298	274	55.84%	47.90%	591	572	RefGen V2	χ2 p-value for B73 x Mo17: '.0045357' χ2 p-value for Mo17 x B73: '.3156243' Biased in favor of strain: ''
GRMZM2G113382	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.66 x 10^-6	174	216	173	525	44.62%	75.21%	390	698	RefGen V2	χ2 p-value for B73 x Mo17: '2.51e-20' χ2 p-value for Mo17 x B73: '1.66e-06' Biased in favor of strain: 'Mo17'
GRMZM2G113373	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G113373	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.24 x 10^-21	332	129	307	95	72.02%	23.63%	461	402	RefGen V2	χ2 p-value for B73 x Mo17: '3.24e-21' χ2 p-value for Mo17 x B73: '3.95e-26' Biased in favor of strain: 'B73'
GRMZM2G113372	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.32645 x 10^-2	14	1	9	3	93.33%	25.00%	15	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0007891' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G113372	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	0	2	50.00%	100.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G113370	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.236735 x 10^-1	10	2	6	10	83.33%	62.50%	12	16	RefGen V2	χ2 p-value for B73 x Mo17: '.220676' χ2 p-value for Mo17 x B73: '.7236735' Biased in favor of strain: ''
GRMZM2G113370	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		20	0	6	0	100.00%	0.00%	20	6	RefGen V2	χ2 p-value for B73 x Mo17: '7.74e-06' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G113364	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	126	124	124	124	50.40%	50.00%	250	248	RefGen V2	χ2 p-value for B73 x Mo17: '.8993432' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G113364	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.30693 x 10^-2	199	73	125	165	73.16%	56.90%	272	290	RefGen V2	χ2 p-value for B73 x Mo17: '.0230693' χ2 p-value for Mo17 x B73: '.0004164' Biased in favor of strain: ''
GRMZM2G113355	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.55 x 10^-7	5226	1477	2363	4166	77.97%	63.81%	6703	6529	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '9.55e-07' Biased in favor of strain: 'B73'
GRMZM2G113355	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.7 x 10^-29	2057	1176	1345	824	63.63%	37.99%	3233	2169	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '4.73e-29' Biased in favor of strain: 'B73'
GRMZM2G113351	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.2634 x 10^-3	225	155	173	118	59.21%	40.55%	380	291	RefGen V2	χ2 p-value for B73 x Mo17: '.0003295' χ2 p-value for Mo17 x B73: '.0012634' Biased in favor of strain: 'B73'
GRMZM2G113351	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.5 x 10^-5	159	40	157	103	79.90%	39.62%	199	260	RefGen V2	χ2 p-value for B73 x Mo17: '.000075' χ2 p-value for Mo17 x B73: '2.18e-20' Biased in favor of strain: 'B73'
GRMZM2G113332	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.85 x 10^-16	389	71	372	285	84.57%	43.38%	460	657	RefGen V2	χ2 p-value for B73 x Mo17: '3.85e-16' χ2 p-value for Mo17 x B73: '9.56e-37' Biased in favor of strain: 'B73'
GRMZM2G113332	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	13437	4097	13960	4928	76.63%	26.09%	17534	18888	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G113325	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.24774 x 10^-2	199	156	200	114	56.06%	36.31%	355	314	RefGen V2	χ2 p-value for B73 x Mo17: '.0224774' χ2 p-value for Mo17 x B73: '1.21e-06' Biased in favor of strain: 'B73'
GRMZM2G113325	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.013617 x 10^-1	51	34	30	55	60.00%	64.71%	85	85	RefGen V2	χ2 p-value for B73 x Mo17: '.1922716' χ2 p-value for Mo17 x B73: '.7013617' Biased in favor of strain: ''
GRMZM2G113319	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.649068 x 10^-1	11	10	14	13	52.38%	48.15%	21	27	RefGen V2	χ2 p-value for B73 x Mo17: '.1649068' χ2 p-value for Mo17 x B73: '.0412268' Biased in favor of strain: ''
GRMZM2G113319	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	24	24	37	32	50.00%	46.38%	48	69	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.5472212' Biased in favor of strain: ''
GRMZM2G113295	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	7	0	100.00%	0.00%	5	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: ''
GRMZM2G113295	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	0	0	0	100.00%		6	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G113276	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	2	100.00%	100.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G113276	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	4	0	0	20.00%		5	0	RefGen V2	χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G113272	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	0	5	0	100.00%	0.00%	7	5	RefGen V2	χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM2G113272	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	14	0	100.00%	0.00%	1	14	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '1.21e-07' Biased in favor of strain: ''
GRMZM2G113267	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.382175 x 10^-1	71	37	35	67	65.74%	65.69%	108	102	RefGen V2	χ2 p-value for B73 x Mo17: '.8382175' χ2 p-value for Mo17 x B73: '.8336345' Biased in favor of strain: ''
GRMZM2G113267	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.997413 x 10^-1	31	32	20	27	49.21%	57.45%	63	47	RefGen V2	χ2 p-value for B73 x Mo17: '.8997413' χ2 p-value for Mo17 x B73: '.3072284' Biased in favor of strain: ''
GRMZM2G113264	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.913 x 10^-4	296	219	301	189	57.48%	38.57%	515	490	RefGen V2	χ2 p-value for B73 x Mo17: '.0006913' χ2 p-value for Mo17 x B73: '4.20e-07' Biased in favor of strain: 'B73'
GRMZM2G113264	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.635253 x 10^-1	100	60	57	66	62.50%	53.66%	160	123	RefGen V2	χ2 p-value for B73 x Mo17: '.2635253' χ2 p-value for Mo17 x B73: '.0022106' Biased in favor of strain: ''
GRMZM2G113250	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.19446 x 10^-2	21	21	16	5	50.00%	23.81%	42	21	RefGen V2	χ2 p-value for B73 x Mo17: '.0219446' χ2 p-value for Mo17 x B73: '.000031' Biased in favor of strain: ''
GRMZM2G113250	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	590	36	427	42	94.25%	8.96%	626	469	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G113245	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.993 x 10^-4	116	71	135	72	62.03%	34.78%	187	207	RefGen V2	χ2 p-value for B73 x Mo17: '.0009993' χ2 p-value for Mo17 x B73: '.0000119' Biased in favor of strain: 'B73'
GRMZM2G113245	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.25 x 10^-6	303	86	136	161	77.89%	54.21%	389	297	RefGen V2	χ2 p-value for B73 x Mo17: '2.65e-06' χ2 p-value for Mo17 x B73: '5.25e-06' Biased in favor of strain: 'B73'
GRMZM2G113244	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.080761 x 10^-1	253	105	188	191	70.67%	50.40%	358	379	RefGen V2	χ2 p-value for B73 x Mo17: '.1080761' χ2 p-value for Mo17 x B73: '1.82e-11' Biased in favor of strain: ''
GRMZM2G113244	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.49 x 10^-14	458	253	401	216	64.42%	35.01%	711	617	RefGen V2	χ2 p-value for B73 x Mo17: '1.49e-14' χ2 p-value for Mo17 x B73: '9.49e-14' Biased in favor of strain: 'B73'
GRMZM2G113241	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.7 x 10^-11	197	87	214	93	69.37%	30.29%	284	307	RefGen V2	χ2 p-value for B73 x Mo17: '6.70e-11' χ2 p-value for Mo17 x B73: '4.99e-12' Biased in favor of strain: 'B73'
GRMZM2G113241	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	2		66.67%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G113235	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G113235	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	1	0.00%	100.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G113232	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.427817 x 10^-1	231	207	189	171	52.74%	47.50%	438	360	RefGen V2	χ2 p-value for B73 x Mo17: '.251479' χ2 p-value for Mo17 x B73: '.3427817' Biased in favor of strain: ''
GRMZM2G113232	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.181214 x 10^-1	145	60	121	225	70.73%	65.03%	205	346	RefGen V2	χ2 p-value for B73 x Mo17: '.2169801' χ2 p-value for Mo17 x B73: '.5181214' Biased in favor of strain: ''
GRMZM2G113229	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		12	0	0	0	100.00%		12	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G113229	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	2	2	100.00%	50.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G113228	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.7022 x 10^-2	24	93	32	51	20.51%	61.45%	117	83	RefGen V2	χ2 p-value for B73 x Mo17: '1.78e-10' χ2 p-value for Mo17 x B73: '.037022' Biased in favor of strain: 'Mo17'
GRMZM2G113228	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.785 x 10^-4	34	69	23	101	33.01%	81.45%	103	124	RefGen V2	χ2 p-value for B73 x Mo17: '4.29e-13' χ2 p-value for Mo17 x B73: '.0004785' Biased in favor of strain: 'Mo17'
GRMZM2G113216	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.734936 x 10^-1	458	209	347	530	68.67%	60.43%	667	877	RefGen V2	χ2 p-value for B73 x Mo17: '.2734936' χ2 p-value for Mo17 x B73: '.0000901' Biased in favor of strain: ''
GRMZM2G113216	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.815739 x 10^-1	177	100	135	121	63.90%	47.27%	277	256	RefGen V2	χ2 p-value for B73 x Mo17: '3.72e-06' χ2 p-value for Mo17 x B73: '.3815739' Biased in favor of strain: ''
GRMZM2G113205	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	5	0	83.33%	0.00%	6	5	RefGen V2	χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM2G113205	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.838823 x 10^-1	17	4	6	9	80.95%	60.00%	21	15	RefGen V2	χ2 p-value for B73 x Mo17: '.16492' χ2 p-value for Mo17 x B73: '.5838823' Biased in favor of strain: ''
GRMZM2G113202	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.919673 x 10^-1	186	85	129	187	68.63%	59.18%	271	316	RefGen V2	χ2 p-value for B73 x Mo17: '.4919673' χ2 p-value for Mo17 x B73: '.0047394' Biased in favor of strain: ''
GRMZM2G113202	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.05 x 10^-21	799	359	673	371	69.00%	35.54%	1158	1044	RefGen V2	χ2 p-value for B73 x Mo17: '3.05e-38' χ2 p-value for Mo17 x B73: '9.05e-21' Biased in favor of strain: 'B73'
GRMZM2G113196	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.94 x 10^-9	319	174	237	125	64.71%	34.53%	493	362	RefGen V2	χ2 p-value for B73 x Mo17: '6.56e-11' χ2 p-value for Mo17 x B73: '3.94e-09' Biased in favor of strain: 'B73'
GRMZM2G113196	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.316008 x 10^-1	11	3	5	12	78.57%	70.59%	14	17	RefGen V2	χ2 p-value for B73 x Mo17: '.3447117' χ2 p-value for Mo17 x B73: '.7316008' Biased in favor of strain: ''
GRMZM2G113177	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.439 x 10^-4	38	2	20	9	95.00%	31.03%	40	29	RefGen V2	χ2 p-value for B73 x Mo17: '.0001439' χ2 p-value for Mo17 x B73: '.0000469' Biased in favor of strain: 'B73'
GRMZM2G113177	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.57929 x 10^-2	65	24	48	31	73.03%	39.24%	89	79	RefGen V2	χ2 p-value for B73 x Mo17: '.0000139' χ2 p-value for Mo17 x B73: '.0557929' Biased in favor of strain: ''
GRMZM2G113174	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.886842 x 10^-1	569	515	483	443	52.49%	47.84%	1084	926	RefGen V2	χ2 p-value for B73 x Mo17: '.1009775' χ2 p-value for Mo17 x B73: '.1886842' Biased in favor of strain: ''
GRMZM2G113174	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	7.13 x 10^-7	309	246	250	331	55.68%	56.97%	555	581	RefGen V2	χ2 p-value for B73 x Mo17: '3.95e-08' χ2 p-value for Mo17 x B73: '7.13e-07' Biased in favor of strain: ''
GRMZM2G113163	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	948	133	439	267	87.70%	37.82%	1081	706	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G113163	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	895	245	920	250	78.51%	21.37%	1140	1170	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G113159	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	580	106	595	95	84.55%	13.77%	686	690	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G113159	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.88 x 10^-25	554	91	349	178	85.89%	33.78%	645	527	RefGen V2	χ2 p-value for B73 x Mo17: '3.88e-25' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G113158	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.088093 x 10^-1	50	4	27	36	92.59%	57.14%	54	63	RefGen V2	χ2 p-value for B73 x Mo17: '.0000531' χ2 p-value for Mo17 x B73: '.1088093' Biased in favor of strain: ''
GRMZM2G113158	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.47 x 10^-11	265	132	391	182	66.75%	31.76%	397	573	RefGen V2	χ2 p-value for B73 x Mo17: '2.47e-11' χ2 p-value for Mo17 x B73: '2.52e-18' Biased in favor of strain: 'B73'
GRMZM2G113156	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	1	5	50.00%	83.33%	2	6	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: ''
GRMZM2G113156	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	2	100.00%	100.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G113137	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0 x 10^-12	2235	838	1312	1899	72.73%	59.14%	3073	3211	RefGen V2	χ2 p-value for B73 x Mo17: '1.00e-12' χ2 p-value for Mo17 x B73: '1.47e-19' Biased in favor of strain: 'B73'
GRMZM2G113137	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.518 x 10^-4	1043	798	855	718	56.65%	45.65%	1841	1573	RefGen V2	χ2 p-value for B73 x Mo17: '1.13e-08' χ2 p-value for Mo17 x B73: '.0005518' Biased in favor of strain: 'B73'
GRMZM2G113129	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	612	103	481	94	85.59%	16.35%	715	575	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G113129	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.01 x 10^-5	65	8	73	43	89.04%	37.07%	73	116	RefGen V2	χ2 p-value for B73 x Mo17: '.0000501' χ2 p-value for Mo17 x B73: '1.36e-11' Biased in favor of strain: 'B73'
GRMZM2G113127	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.119234 x 10^-1	21	8	10	23	72.41%	69.70%	29	33	RefGen V2	χ2 p-value for B73 x Mo17: '.5114968' χ2 p-value for Mo17 x B73: '.7119234' Biased in favor of strain: ''
GRMZM2G113127	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.7144 x 10^-3	31	11	18	5	73.81%	21.74%	42	23	RefGen V2	χ2 p-value for B73 x Mo17: '.0020282' χ2 p-value for Mo17 x B73: '.0067144' Biased in favor of strain: 'B73'
GRMZM2G113098	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1769 x 10^-3	42	11	29	9	79.25%	23.68%	53	38	RefGen V2	χ2 p-value for B73 x Mo17: '.0000206' χ2 p-value for Mo17 x B73: '.0011769' Biased in favor of strain: 'B73'
GRMZM2G113098	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	0	0	75.00%		4	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G113096	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.96 x 10^-14	366	70	187	160	83.94%	46.11%	436	347	RefGen V2	χ2 p-value for B73 x Mo17: '1.96e-14' χ2 p-value for Mo17 x B73: '4.54e-16' Biased in favor of strain: 'B73'
GRMZM2G113096	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.46 x 10^-9	328	144	253	134	69.49%	34.63%	472	387	RefGen V2	χ2 p-value for B73 x Mo17: '2.47e-17' χ2 p-value for Mo17 x B73: '1.46e-09' Biased in favor of strain: 'B73'
GRMZM2G113093	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.582677 x 10^-1	197	212	247	178	48.17%	41.88%	409	425	RefGen V2	χ2 p-value for B73 x Mo17: '.4582677' χ2 p-value for Mo17 x B73: '.0008169' Biased in favor of strain: ''
GRMZM2G113093	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.942328 x 10^-1	498	229	268	319	68.50%	54.34%	727	587	RefGen V2	χ2 p-value for B73 x Mo17: '.2942328' χ2 p-value for Mo17 x B73: '2.40e-10' Biased in favor of strain: ''
GRMZM2G113089	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.48 x 10^-20	353	46	212	114	88.47%	34.97%	399	326	RefGen V2	χ2 p-value for B73 x Mo17: '2.48e-20' χ2 p-value for Mo17 x B73: '6.44e-34' Biased in favor of strain: 'B73'
GRMZM2G113089	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.92 x 10^-7	130	51	98	40	71.82%	28.99%	181	138	RefGen V2	χ2 p-value for B73 x Mo17: '4.31e-09' χ2 p-value for Mo17 x B73: '7.92e-07' Biased in favor of strain: 'B73'

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